RNA–Protein interactions for RNA: ENST00000394419.8

ACTN1-203, Transcript of actinin alpha 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ACTN1, Length 3,464 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-203ENST00000394419 NTPCRQ9BSD7 190 aaKnown RBP11.09□□□□□ -0.63
ACTN1-203ENST00000394419 SYNJ2BP-COX16A0A087WUM0 186 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 CFAP69A5D8W1 941 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 CBX6O95503 412 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 TROVE2P10155 538 aaKnown RBP eCLIP11.09□□□□□ -0.63
ACTN1-203ENST00000394419 RBP3P10745 1247 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 PTPRAP18433 802 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 FOXN2P32314 431 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 CDH6P55285 790 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 NCALDP61601 193 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 MXRA7P84157 204 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 ANKRD20A3Q5VUR7 823 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 ABHD15Q6UXT9 468 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 KATNAL2Q8IYT4 538 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 C12orf50Q8NA57 414 aaPredicted RBP11.09□□□□□ -0.63
ACTN1-203ENST00000394419 MAGEB18Q96M61 343 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 SLC13A1Q9BZW2 595 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 NIF3L1Q9GZT8 377 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 RNF19AQ9NV58 838 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 COX16Q9P0S2 106 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 TAF1LQ8IZX4 1826 aa11.09□□□□□ -0.63
ACTN1-203ENST00000394419 CLCN3P51790 818 aa11.08□□□□□ -0.64
ACTN1-203ENST00000394419 CAPSQ13938 189 aa11.08□□□□□ -0.64
ACTN1-203ENST00000394419 LACTB2Q53H82 288 aaPredicted RBP11.08□□□□□ -0.64
ACTN1-203ENST00000394419 SWT1Q5T5J6 900 aaKnown RBP11.08□□□□□ -0.64
ACTN1-203ENST00000394419 PPM1NQ8N819 430 aa11.08□□□□□ -0.64
ACTN1-203ENST00000394419 FBXO36Q8NEA4 188 aa11.08□□□□□ -0.64
ACTN1-203ENST00000394419 SPATA18Q8TC71 538 aa11.08□□□□□ -0.64
ACTN1-203ENST00000394419 CCHCR1Q8TD31 782 aa11.08□□□□□ -0.64
ACTN1-203ENST00000394419 FBXL18Q96ME1 805 aa11.08□□□□□ -0.64
ACTN1-203ENST00000394419 ADPGKQ9BRR6 497 aa11.08□□□□□ -0.64
ACTN1-203ENST00000394419 PORCNQ9H237 461 aa11.08□□□□□ -0.64
ACTN1-203ENST00000394419 RPF1Q9H9Y2 349 aaKnown RBP11.08□□□□□ -0.64
ACTN1-203ENST00000394419 GEMIN8Q9NWZ8 242 aaKnown RBP11.08□□□□□ -0.64
ACTN1-203ENST00000394419 XPO7Q9UIA9 1087 aaKnown RBP11.08□□□□□ -0.64
ACTN1-203ENST00000394419 KITP10721 976 aa11.08□□□□□ -0.64
ACTN1-203ENST00000394419 IVDP26440 423 aa11.08□□□□□ -0.64
ACTN1-203ENST00000394419 C1QBPQ07021 282 aaKnown RBP11.08□□□□□ -0.64
ACTN1-203ENST00000394419 EAPPQ56P03 285 aaPredicted RBP11.08□□□□□ -0.64
ACTN1-203ENST00000394419 DENND1BQ6P3S1 775 aa11.08□□□□□ -0.64
ACTN1-203ENST00000394419 VPS52Q8N1B4 723 aa11.08□□□□□ -0.64
ACTN1-203ENST00000394419 ZCCHC9Q8N567 271 aaKnown RBP11.08□□□□□ -0.64
ACTN1-203ENST00000394419 MCUR1Q96AQ8 359 aa11.08□□□□□ -0.64
ACTN1-203ENST00000394419 FAF2Q96CS3 445 aa11.08□□□□□ -0.64
ACTN1-203ENST00000394419 TTC25Q96NG3 672 aa11.08□□□□□ -0.64
ACTN1-203ENST00000394419 NOP53Q9NZM5 478 aaKnown RBP11.08□□□□□ -0.64
ACTN1-203ENST00000394419 AKT3Q9Y243 479 aa11.08□□□□□ -0.64
ACTN1-203ENST00000394419 LTBP4Q8N2S1 1624 aa11.08□□□□□ -0.64
ACTN1-203ENST00000394419 CCDC195A0A1B0GUA6 201 aa11.08□□□□□ -0.64
ACTN1-203ENST00000394419 SKAP2O75563 359 aaPredicted RBP11.08□□□□□ -0.64
ACTN1-203ENST00000394419 CYP1A1P04798 512 aaPredicted RBP11.08□□□□□ -0.64
ACTN1-203ENST00000394419 CXCL8P10145 99 aa11.08□□□□□ -0.64
ACTN1-203ENST00000394419 SGSM1Q2NKQ1 1148 aa11.08□□□□□ -0.64
ACTN1-203ENST00000394419 JOSD2Q8TAC2 188 aa11.08□□□□□ -0.64
ACTN1-203ENST00000394419 HAPLN2Q9GZV7 340 aa11.08□□□□□ -0.64
ACTN1-203ENST00000394419 MYLK2Q9H1R3 596 aa11.08□□□□□ -0.64
ACTN1-203ENST00000394419 TXLNGQ9NUQ3 528 aa11.08□□□□□ -0.64
ACTN1-203ENST00000394419 GPATCH2LQ9NWQ4 482 aa11.08□□□□□ -0.64
ACTN1-203ENST00000394419 GGA3Q9NZ52 723 aa11.08□□□□□ -0.64
ACTN1-203ENST00000394419 MAGED2Q9UNF1 606 aaPredicted RBP11.08□□□□□ -0.64
ACTN1-203ENST00000394419 BHMG1C9JSJ3 638 aaPredicted RBP11.07□□□□□ -0.64
ACTN1-203ENST00000394419 CD48P09326 243 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 TAC1P20366 129 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 MMP8P22894 467 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 ADRA1DP25100 572 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 VCPP55072 806 aaKnown RBP11.07□□□□□ -0.64
ACTN1-203ENST00000394419 WDR4P57081 412 aaKnown RBP11.07□□□□□ -0.64
ACTN1-203ENST00000394419 RCN2Q14257 317 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 PIGHQ14442 188 aaPredicted RBP11.07□□□□□ -0.64
ACTN1-203ENST00000394419 TFAP2BQ92481 460 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 MAML1Q92585 1016 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 RAB3IPQ96QF0 476 aaPredicted RBP11.07□□□□□ -0.64
ACTN1-203ENST00000394419 TMEM109Q9BVC6 243 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 MIS12Q9H081 205 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 RXFP1Q9HBX9 757 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 MAP3K20Q9NYL2 800 aaKnown RBP11.07□□□□□ -0.64
ACTN1-203ENST00000394419 PSMC3IPQ9P2W1 217 aaPredicted RBP11.07□□□□□ -0.64
ACTN1-203ENST00000394419 ZFP69BQ9UJL9 534 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 B4GALT5O43286 388 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 TOM1L1O75674 476 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 OGDHQ02218 1023 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 SLC1A5Q15758 541 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 MDH1BQ5I0G3 518 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 ZNF772Q68DY9 489 aaPredicted RBP11.07□□□□□ -0.64
ACTN1-203ENST00000394419 PLEKHA7Q6IQ23 1121 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 CRELD2Q6UXH1 353 aaPredicted RBP11.07□□□□□ -0.64
ACTN1-203ENST00000394419 NPNTQ6UXI9 565 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 ECHDC2Q86YB7 292 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 ATP11CQ8NB49 1132 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 CNKSR2Q8WXI2 1034 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 SEPT1Q8WYJ6 367 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 APOL6Q9BWW8 343 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 RAB6BQ9NRW1 208 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 SDAD1Q9NVU7 687 aaKnown RBP eCLIP11.07□□□□□ -0.643e-7■□□□□ 9.8
ACTN1-203ENST00000394419 MARCOQ9UEW3 520 aaPredicted RBP11.07□□□□□ -0.64
ACTN1-203ENST00000394419 ZNF214Q9UL59 606 aaPredicted RBP11.07□□□□□ -0.64
ACTN1-203ENST00000394419 C10orf71Q711Q0 1435 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 A0A0B4J269 797 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 TMEM191CA6NGB0 347 aa11.07□□□□□ -0.64
ACTN1-203ENST00000394419 ADCY3O60266 1144 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms