RNA–Protein interactions for RNA: ENST00000393551.5

PDLIM7-205, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 1,226 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-205ENST00000393551 LIMS2Q7Z4I7 341 aa19.62■□□□□ 0.73
PDLIM7-205ENST00000393551 DCP1BQ8IZD4 617 aaKnown RBP19.62■□□□□ 0.73
PDLIM7-205ENST00000393551 DCLK2Q8N568 766 aa19.62■□□□□ 0.73
PDLIM7-205ENST00000393551 ZNF507Q8TCN5 953 aa19.62■□□□□ 0.73
PDLIM7-205ENST00000393551 C7orf25Q9BPX7 421 aa19.62■□□□□ 0.73
PDLIM7-205ENST00000393551 ACBD6Q9BR61 282 aa19.62■□□□□ 0.73
PDLIM7-205ENST00000393551 PI4K2AQ9BTU6 479 aa19.62■□□□□ 0.73
PDLIM7-205ENST00000393551 LMAN1LQ9HAT1 526 aa19.62■□□□□ 0.73
PDLIM7-205ENST00000393551 GTSE1Q9NYZ3 720 aa19.62■□□□□ 0.73
PDLIM7-205ENST00000393551 HSPBP1Q9NZL4 362 aa19.62■□□□□ 0.73
PDLIM7-205ENST00000393551 SNX9Q9Y5X1 595 aa19.62■□□□□ 0.73
PDLIM7-205ENST00000393551 GREB1Q4ZG55 1949 aa19.62■□□□□ 0.73
PDLIM7-205ENST00000393551 LILRB5O75023 590 aa19.61■□□□□ 0.73
PDLIM7-205ENST00000393551 KRT19P08727 400 aa19.61■□□□□ 0.73
PDLIM7-205ENST00000393551 ZSCAN22P10073 491 aaPredicted RBP19.61■□□□□ 0.73
PDLIM7-205ENST00000393551 CDC25CP30307 473 aa19.61■□□□□ 0.73
PDLIM7-205ENST00000393551 NLRP12P59046 1061 aa19.61■□□□□ 0.73
PDLIM7-205ENST00000393551 ASIC1P78348 528 aa19.61■□□□□ 0.73
PDLIM7-205ENST00000393551 RBP5P82980 135 aa19.61■□□□□ 0.73
PDLIM7-205ENST00000393551 INTS6LQ5JSJ4 861 aaKnown RBP19.61■□□□□ 0.73
PDLIM7-205ENST00000393551 MAMSTRQ6ZN01 415 aa19.61■□□□□ 0.73
PDLIM7-205ENST00000393551 TMEM86AQ8N2M4 240 aa19.61■□□□□ 0.73
PDLIM7-205ENST00000393551 IQUBQ8NA54 791 aa19.61■□□□□ 0.73
PDLIM7-205ENST00000393551 TTC8Q8TAM2 541 aa19.61■□□□□ 0.73
PDLIM7-205ENST00000393551 LEO1Q8WVC0 666 aaPredicted RBP19.61■□□□□ 0.73
PDLIM7-205ENST00000393551 OBP2AQ9NY56 170 aa19.61■□□□□ 0.73
PDLIM7-205ENST00000393551 PCDHA7Q9UN72 937 aa19.61■□□□□ 0.73
PDLIM7-205ENST00000393551 ANAPC1Q9H1A4 1944 aa19.61■□□□□ 0.73
PDLIM7-205ENST00000393551 MYBPHLA2RUH7 354 aa19.6■□□□□ 0.73
PDLIM7-205ENST00000393551 KIAA0391O15091 583 aaKnown RBP19.6■□□□□ 0.73
PDLIM7-205ENST00000393551 EIF3DO15371 548 aaKnown RBP eCLIP19.6■□□□□ 0.73
PDLIM7-205ENST00000393551 POLR2DO15514 142 aaKnown RBP19.6■□□□□ 0.73
PDLIM7-205ENST00000393551 HUS1O60921 280 aa19.6■□□□□ 0.73
PDLIM7-205ENST00000393551 F13A1P00488 732 aa19.6■□□□□ 0.73
PDLIM7-205ENST00000393551 CYP2F1P24903 491 aa19.6■□□□□ 0.73
PDLIM7-205ENST00000393551 TSPY1Q01534 308 aa19.6■□□□□ 0.73
PDLIM7-205ENST00000393551 TNK2Q07912 1038 aa19.6■□□□□ 0.73
PDLIM7-205ENST00000393551 DDR2Q16832 855 aa19.6■□□□□ 0.73
PDLIM7-205ENST00000393551 ARHGAP15Q53QZ3 475 aa19.6■□□□□ 0.73
PDLIM7-205ENST00000393551 YAF2Q8IY57 180 aa19.6■□□□□ 0.73
PDLIM7-205ENST00000393551 CMTM8Q8IZV2 173 aa19.6■□□□□ 0.73
PDLIM7-205ENST00000393551 TOP6BLQ8N6T0 577 aa19.6■□□□□ 0.73
PDLIM7-205ENST00000393551 RIN3Q8TB24 985 aa19.6■□□□□ 0.73
PDLIM7-205ENST00000393551 CSGALNACT1Q8TDX6 532 aa19.6■□□□□ 0.73
PDLIM7-205ENST00000393551 SCFD1Q8WVM8 642 aa19.6■□□□□ 0.73
PDLIM7-205ENST00000393551 KBTBD7Q8WVZ9 684 aa19.6■□□□□ 0.73
PDLIM7-205ENST00000393551 LRRC27Q9C0I9 530 aa19.6■□□□□ 0.73
PDLIM7-205ENST00000393551 GZF1Q9H116 711 aaPredicted RBP19.6■□□□□ 0.73
PDLIM7-205ENST00000393551 BLZF1Q9H2G9 400 aa19.6■□□□□ 0.73
PDLIM7-205ENST00000393551 ZSCAN32Q9NX65 697 aa19.6■□□□□ 0.73
PDLIM7-205ENST00000393551 GTF3C4Q9UKN8 822 aa19.6■□□□□ 0.73
PDLIM7-205ENST00000393551 CCL26Q9Y258 94 aa19.6■□□□□ 0.73
PDLIM7-205ENST00000393551 PCDHGA2Q9Y5H1 932 aa19.6■□□□□ 0.73
PDLIM7-205ENST00000393551 PTPRDP23468 1912 aa19.6■□□□□ 0.73
PDLIM7-205ENST00000393551 ZNF233A6NK53 670 aa19.59■□□□□ 0.73
PDLIM7-205ENST00000393551 KINO60870 393 aaKnown RBP19.59■□□□□ 0.73
PDLIM7-205ENST00000393551 PRPF40AO75400 957 aaKnown RBP19.59■□□□□ 0.73
PDLIM7-205ENST00000393551 TADA3O75528 432 aa19.59■□□□□ 0.73
PDLIM7-205ENST00000393551 TMEM191BP0C7N4 346 aa19.59■□□□□ 0.73
PDLIM7-205ENST00000393551 LMO2P25791 158 aa19.59■□□□□ 0.73
PDLIM7-205ENST00000393551 NFE2Q16621 373 aaPredicted RBP19.59■□□□□ 0.73
PDLIM7-205ENST00000393551 ARHGAP29Q52LW3 1261 aa19.59■□□□□ 0.73
PDLIM7-205ENST00000393551 FAM26FQ5R3K3 315 aa19.59■□□□□ 0.73
PDLIM7-205ENST00000393551 ADGRF2Q8IZF7 708 aa19.59■□□□□ 0.73
PDLIM7-205ENST00000393551 BPIFB1Q8TDL5 484 aa19.59■□□□□ 0.73
PDLIM7-205ENST00000393551 AGPAT3Q9NRZ7 376 aa19.59■□□□□ 0.73
PDLIM7-205ENST00000393551 RBM12Q9NTZ6 932 aaKnown RBP19.59■□□□□ 0.73
PDLIM7-205ENST00000393551 SPECC1L-ADORA2AF8WAN1 911 aa19.58■□□□□ 0.72
PDLIM7-205ENST00000393551 DPYSL4O14531 572 aa19.58■□□□□ 0.72
PDLIM7-205ENST00000393551 ATP2C2O75185 946 aa19.58■□□□□ 0.72
PDLIM7-205ENST00000393551 CTHP32929 405 aa19.58■□□□□ 0.72
PDLIM7-205ENST00000393551 AMPD3Q01432 767 aa19.58■□□□□ 0.72
PDLIM7-205ENST00000393551 TAF12Q16514 161 aa19.58■□□□□ 0.72
PDLIM7-205ENST00000393551 RESP18Q5W5W9 173 aa19.58■□□□□ 0.72
PDLIM7-205ENST00000393551 TXNDC8Q6A555 127 aa19.58■□□□□ 0.72
PDLIM7-205ENST00000393551 FAM171BQ6P995 826 aa19.58■□□□□ 0.72
PDLIM7-205ENST00000393551 STXBP4Q6ZWJ1 553 aa19.58■□□□□ 0.72
PDLIM7-205ENST00000393551 UNC13DQ70J99 1090 aa19.58■□□□□ 0.72
PDLIM7-205ENST00000393551 KIAA2013Q8IYS2 634 aa19.58■□□□□ 0.72
PDLIM7-205ENST00000393551 MAB21L3Q8N8X9 362 aa19.58■□□□□ 0.72
PDLIM7-205ENST00000393551 RDH13Q8NBN7 331 aa19.58■□□□□ 0.72
PDLIM7-205ENST00000393551 SPATA18Q8TC71 538 aa19.58■□□□□ 0.72
PDLIM7-205ENST00000393551 USP13Q92995 863 aaPredicted RBP19.58■□□□□ 0.72
PDLIM7-205ENST00000393551 CHFRQ96EP1 664 aa19.58■□□□□ 0.72
PDLIM7-205ENST00000393551 HPDLQ96IR7 371 aa19.58■□□□□ 0.72
PDLIM7-205ENST00000393551 ANKRD36BP1Q96IX9 119 aa19.58■□□□□ 0.72
PDLIM7-205ENST00000393551 C8orf33Q9H7E9 229 aaPredicted RBP19.58■□□□□ 0.72
PDLIM7-205ENST00000393551 ABCB6Q9NP58 842 aa19.58■□□□□ 0.72
PDLIM7-205ENST00000393551 C2orf42Q9NWW7 574 aa19.58■□□□□ 0.72
PDLIM7-205ENST00000393551 NME7Q9Y5B8 376 aa19.58■□□□□ 0.72
PDLIM7-205ENST00000393551 ATG2BQ96BY7 2078 aa19.57■□□□□ 0.72
PDLIM7-205ENST00000393551 CLIC2O15247 247 aa19.57■□□□□ 0.72
PDLIM7-205ENST00000393551 NOL4O94818 638 aa19.57■□□□□ 0.72
PDLIM7-205ENST00000393551 CST3P01034 146 aaPredicted RBP19.57■□□□□ 0.72
PDLIM7-205ENST00000393551 LHX1P48742 406 aa19.57■□□□□ 0.72
PDLIM7-205ENST00000393551 KPNA1P52294 538 aaPredicted RBP19.57■□□□□ 0.72
PDLIM7-205ENST00000393551 MYL7Q01449 175 aa19.57■□□□□ 0.72
PDLIM7-205ENST00000393551 SATB1Q01826 763 aa19.57■□□□□ 0.72
PDLIM7-205ENST00000393551 CUL4BQ13620 913 aa19.57■□□□□ 0.72
PDLIM7-205ENST00000393551 SNRNP35Q16560 246 aaKnown RBP19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms