RNA–Protein interactions for RNA: ENST00000393546.8

PDLIM7-204, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 671 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-204ENST00000393546 CNOT6LQ96LI5 555 aaKnown RBP20.29■□□□□ 0.84
PDLIM7-204ENST00000393546 PKMYT1Q99640 499 aa20.29■□□□□ 0.84
PDLIM7-204ENST00000393546 SEPT5Q99719 369 aaPredicted RBP20.29■□□□□ 0.84
PDLIM7-204ENST00000393546 NIF3L1Q9GZT8 377 aa20.29■□□□□ 0.84
PDLIM7-204ENST00000393546 CYP3A43Q9HB55 503 aa20.29■□□□□ 0.84
PDLIM7-204ENST00000393546 APOBEC3GQ9HC16 384 aaKnown RBP20.29■□□□□ 0.84
PDLIM7-204ENST00000393546 DNMT3BQ9UBC3 853 aaKnown RBP20.29■□□□□ 0.84
PDLIM7-204ENST00000393546 USTQ9Y2C2 406 aa20.29■□□□□ 0.84
PDLIM7-204ENST00000393546 P4HA2O15460 535 aa20.28■□□□□ 0.84
PDLIM7-204ENST00000393546 HAPLN1P10915 354 aaPredicted RBP20.28■□□□□ 0.84
PDLIM7-204ENST00000393546 PTPN1P18031 435 aaKnown RBP20.28■□□□□ 0.84
PDLIM7-204ENST00000393546 PSMC1P62191 440 aaKnown RBP20.28■□□□□ 0.84
PDLIM7-204ENST00000393546 STX1AQ16623 288 aa20.28■□□□□ 0.84
PDLIM7-204ENST00000393546 FAM114A1Q8IWE2 563 aa20.28■□□□□ 0.84
PDLIM7-204ENST00000393546 BCO2Q9BYV7 579 aa20.28■□□□□ 0.84
PDLIM7-204ENST00000393546 SDCBP2Q9H190 292 aa20.28■□□□□ 0.84
PDLIM7-204ENST00000393546 THAP9Q9H5L6 903 aa20.28■□□□□ 0.84
PDLIM7-204ENST00000393546 ABCB6Q9NP58 842 aa20.28■□□□□ 0.84
PDLIM7-204ENST00000393546 MAGEC2Q9UBF1 373 aaPredicted RBP20.28■□□□□ 0.84
PDLIM7-204ENST00000393546 ASB3Q9Y575 518 aa20.28■□□□□ 0.84
PDLIM7-204ENST00000393546 NCOR1O75376 2440 aa20.27■□□□□ 0.84
PDLIM7-204ENST00000393546 LRRN2O75325 713 aa20.27■□□□□ 0.84
PDLIM7-204ENST00000393546 AFPP02771 609 aaKnown RBP20.27■□□□□ 0.84
PDLIM7-204ENST00000393546 SP100P23497 879 aaPredicted RBP20.27■□□□□ 0.84
PDLIM7-204ENST00000393546 FSHRP23945 695 aa20.27■□□□□ 0.84
PDLIM7-204ENST00000393546 ASPAP45381 313 aa20.27■□□□□ 0.84
PDLIM7-204ENST00000393546 MTIF2P46199 727 aaKnown RBP20.27■□□□□ 0.84
PDLIM7-204ENST00000393546 NTHL1P78549 312 aa20.27■□□□□ 0.84
PDLIM7-204ENST00000393546 KLHL40Q2TBA0 621 aa20.27■□□□□ 0.84
PDLIM7-204ENST00000393546 PABPC1LQ4VXU2 614 aaKnown RBP20.27■□□□□ 0.84
PDLIM7-204ENST00000393546 IRF2BP1Q8IU81 584 aa20.27■□□□□ 0.84
PDLIM7-204ENST00000393546 PLCD3Q8N3E9 789 aa20.27■□□□□ 0.84
PDLIM7-204ENST00000393546 TTC9BQ8N6N2 239 aa20.27■□□□□ 0.84
PDLIM7-204ENST00000393546 TDRD5Q8NAT2 981 aaKnown RBP20.27■□□□□ 0.84
PDLIM7-204ENST00000393546 MYCBPAPQ8TBZ2 947 aa20.27■□□□□ 0.84
PDLIM7-204ENST00000393546 FAM200AQ8TCP9 573 aa20.27■□□□□ 0.84
PDLIM7-204ENST00000393546 FUBP3Q96I24 572 aaKnown RBP eCLIP20.27■□□□□ 0.84
PDLIM7-204ENST00000393546 TNIP3Q96KP6 325 aa20.27■□□□□ 0.84
PDLIM7-204ENST00000393546 CORO1BQ9BR76 489 aa20.27■□□□□ 0.84
PDLIM7-204ENST00000393546 CRTAC1Q9NQ79 661 aa20.27■□□□□ 0.84
PDLIM7-204ENST00000393546 HCFC1R1Q9NWW0 138 aa20.27■□□□□ 0.84
PDLIM7-204ENST00000393546 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.27■□□□□ 0.84
PDLIM7-204ENST00000393546 CEP72Q9P209 647 aa20.27■□□□□ 0.84
PDLIM7-204ENST00000393546 NME7Q9Y5B8 376 aa20.27■□□□□ 0.84
PDLIM7-204ENST00000393546 DOCK6Q96HP0 2047 aa20.27■□□□□ 0.84
PDLIM7-204ENST00000393546 SOAT2O75908 522 aa20.26■□□□□ 0.83
PDLIM7-204ENST00000393546 LETM1O95202 739 aaPredicted RBP20.26■□□□□ 0.83
PDLIM7-204ENST00000393546 RHOP08100 348 aa20.26■□□□□ 0.83
PDLIM7-204ENST00000393546 TRIM21P19474 475 aaKnown RBP20.26■□□□□ 0.83
PDLIM7-204ENST00000393546 GBP2P32456 591 aaPredicted RBP20.26■□□□□ 0.83
PDLIM7-204ENST00000393546 VEPH1Q14D04 833 aa20.26■□□□□ 0.83
PDLIM7-204ENST00000393546 MDH1BQ5I0G3 518 aa20.26■□□□□ 0.83
PDLIM7-204ENST00000393546 CYP4A22Q5TCH4 519 aa20.26■□□□□ 0.83
PDLIM7-204ENST00000393546 ITIH5Q86UX2 942 aa20.26■□□□□ 0.83
PDLIM7-204ENST00000393546 UNC93AQ86WB7 457 aa20.26■□□□□ 0.83
PDLIM7-204ENST00000393546 B3GALNT2Q8NCR0 500 aa20.26■□□□□ 0.83
PDLIM7-204ENST00000393546 ENOX1Q8TC92 643 aaKnown RBP20.26■□□□□ 0.83
PDLIM7-204ENST00000393546 TATDN2Q93075 761 aa20.26■□□□□ 0.83
PDLIM7-204ENST00000393546 DNAI2Q9GZS0 605 aa20.26■□□□□ 0.83
PDLIM7-204ENST00000393546 CD320Q9NPF0 282 aa20.26■□□□□ 0.83
PDLIM7-204ENST00000393546 C5orf42Q9H799 3197 aa20.26■□□□□ 0.83
PDLIM7-204ENST00000393546 C2CD4DB7Z1M9 353 aa20.25■□□□□ 0.83
PDLIM7-204ENST00000393546 ZNF197O14709 1029 aa20.25■□□□□ 0.83
PDLIM7-204ENST00000393546 CYP2F1P24903 491 aa20.25■□□□□ 0.83
PDLIM7-204ENST00000393546 NDST1P52848 882 aa20.25■□□□□ 0.83
PDLIM7-204ENST00000393546 RPL10AP62906 217 aaKnown RBP20.25■□□□□ 0.83
PDLIM7-204ENST00000393546 CYP27A1Q02318 531 aa20.25■□□□□ 0.83
PDLIM7-204ENST00000393546 CFAP221Q4G0U5 840 aa20.25■□□□□ 0.83
PDLIM7-204ENST00000393546 TTC39CQ8N584 583 aa20.25■□□□□ 0.83
PDLIM7-204ENST00000393546 LEMD2Q8NC56 503 aa20.25■□□□□ 0.83
PDLIM7-204ENST00000393546 MYLPFQ96A32 169 aa20.25■□□□□ 0.83
PDLIM7-204ENST00000393546 DPEP3Q9H4B8 488 aa20.25■□□□□ 0.83
PDLIM7-204ENST00000393546 AVENQ9NQS1 362 aaPredicted RBP20.25■□□□□ 0.83
PDLIM7-204ENST00000393546 MRPS23Q9Y3D9 190 aaKnown RBP20.25■□□□□ 0.83
PDLIM7-204ENST00000393546 TTC28Q96AY4 2481 aa20.25■□□□□ 0.83
PDLIM7-204ENST00000393546 TNFRSF10AO00220 468 aa20.24■□□□□ 0.83
PDLIM7-204ENST00000393546 MAGEA11P43364 429 aa20.24■□□□□ 0.83
PDLIM7-204ENST00000393546 TYRO3Q06418 890 aa20.24■□□□□ 0.83
PDLIM7-204ENST00000393546 INCA1Q0VD86 236 aa20.24■□□□□ 0.83
PDLIM7-204ENST00000393546 TAF12Q16514 161 aa20.24■□□□□ 0.83
PDLIM7-204ENST00000393546 CCDC142Q17RM4 750 aa20.24■□□□□ 0.83
PDLIM7-204ENST00000393546 SKOR2Q2VWA4 1001 aaPredicted RBP20.24■□□□□ 0.83
PDLIM7-204ENST00000393546 PDZD4Q76G19 769 aaPredicted RBP20.24■□□□□ 0.83
PDLIM7-204ENST00000393546 GET4Q7L5D6 327 aaPredicted RBP20.24■□□□□ 0.83
PDLIM7-204ENST00000393546 DNAJB7Q7Z6W7 309 aaPredicted RBP20.24■□□□□ 0.83
PDLIM7-204ENST00000393546 ACOT1Q86TX2 421 aa20.24■□□□□ 0.83
PDLIM7-204ENST00000393546 ZDHHC14Q8IZN3 488 aa20.24■□□□□ 0.83
PDLIM7-204ENST00000393546 HS6ST3Q8IZP7 471 aa20.24■□□□□ 0.83
PDLIM7-204ENST00000393546 CRYBG2Q8N1P7 616 aa20.24■□□□□ 0.83
PDLIM7-204ENST00000393546 EHBP1Q8NDI1 1231 aa20.24■□□□□ 0.83
PDLIM7-204ENST00000393546 GIPC2Q8TF65 315 aa20.24■□□□□ 0.83
PDLIM7-204ENST00000393546 PSMG2Q969U7 264 aa20.24■□□□□ 0.83
PDLIM7-204ENST00000393546 PCED1BQ96HM7 432 aa20.24■□□□□ 0.83
PDLIM7-204ENST00000393546 DNAJC25Q9H1X3 360 aa20.24■□□□□ 0.83
PDLIM7-204ENST00000393546 FAM124BQ9H5Z6 455 aaPredicted RBP20.24■□□□□ 0.83
PDLIM7-204ENST00000393546 ASAH2Q9NR71 780 aa20.24■□□□□ 0.83
PDLIM7-204ENST00000393546 NFE2L3Q9Y4A8 694 aa20.24■□□□□ 0.83
PDLIM7-204ENST00000393546 DENND4AQ7Z401 1863 aa20.24■□□□□ 0.83
PDLIM7-204ENST00000393546 CD58P19256 250 aa20.23■□□□□ 0.83
PDLIM7-204ENST00000393546 BDNFP23560 247 aa20.23■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms