RNA–Protein interactions for RNA: ENST00000393454.6

TDP1-203, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 2,068 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-203ENST00000393454 RPL9P32969 192 aaKnown RBP9.14□□□□□ -0.95
TDP1-203ENST00000393454 ZNF211Q13398 564 aaPredicted RBP9.14□□□□□ -0.95
TDP1-203ENST00000393454 PTPN20Q4JDL3 420 aa9.14□□□□□ -0.95
TDP1-203ENST00000393454 WSCD1Q658N2 575 aa9.14□□□□□ -0.95
TDP1-203ENST00000393454 SLC24A5Q71RS6 500 aa9.14□□□□□ -0.95
TDP1-203ENST00000393454 PDCL2Q8N4E4 241 aa9.14□□□□□ -0.95
TDP1-203ENST00000393454 TOP6BLQ8N6T0 577 aa9.14□□□□□ -0.95
TDP1-203ENST00000393454 KRT35Q92764 455 aa9.14□□□□□ -0.95
TDP1-203ENST00000393454 SENP8Q96LD8 212 aa9.14□□□□□ -0.95
TDP1-203ENST00000393454 MCEEQ96PE7 176 aa9.14□□□□□ -0.95
TDP1-203ENST00000393454 CPXM1Q96SM3 734 aa9.14□□□□□ -0.95
TDP1-203ENST00000393454 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.14□□□□□ -0.95
TDP1-203ENST00000393454 PGRMC1O00264 195 aaKnown RBP9.14□□□□□ -0.95
TDP1-203ENST00000393454 PIK3R2O00459 728 aa9.14□□□□□ -0.95
TDP1-203ENST00000393454 PROSCO94903 275 aa9.14□□□□□ -0.95
TDP1-203ENST00000393454 EOMESO95936 686 aa9.14□□□□□ -0.95
TDP1-203ENST00000393454 CCDC130P13994 396 aa9.14□□□□□ -0.95
TDP1-203ENST00000393454 WARSP23381 471 aaKnown RBP9.14□□□□□ -0.95
TDP1-203ENST00000393454 SLC1A1P43005 524 aa9.14□□□□□ -0.95
TDP1-203ENST00000393454 GPD2P43304 727 aa9.14□□□□□ -0.95
TDP1-203ENST00000393454 MARCKSL1P49006 195 aa9.14□□□□□ -0.95
TDP1-203ENST00000393454 RPL7AP62424 266 aaKnown RBP9.14□□□□□ -0.95
TDP1-203ENST00000393454 GRIK3Q13003 919 aa9.14□□□□□ -0.95
TDP1-203ENST00000393454 PDCLQ13371 301 aa9.14□□□□□ -0.95
TDP1-203ENST00000393454 GLB1LQ6UWU2 654 aa9.14□□□□□ -0.95
TDP1-203ENST00000393454 ZNF572Q7Z3I7 529 aaPredicted RBP9.14□□□□□ -0.95
TDP1-203ENST00000393454 OSTM1Q86WC4 334 aa9.14□□□□□ -0.95
TDP1-203ENST00000393454 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.14□□□□□ -0.95
TDP1-203ENST00000393454 IPO4Q8TEX9 1081 aaKnown RBP9.14□□□□□ -0.95
TDP1-203ENST00000393454 TNIP3Q96KP6 325 aa9.14□□□□□ -0.95
TDP1-203ENST00000393454 BUD13Q9BRD0 619 aaKnown RBP eCLIP9.14□□□□□ -0.952e-6■■□□□ 12.6
TDP1-203ENST00000393454 PAAF1Q9BRP4 392 aa9.14□□□□□ -0.95
TDP1-203ENST00000393454 FTHL17Q9BXU8 183 aa9.14□□□□□ -0.95
TDP1-203ENST00000393454 PARD6BQ9BYG5 372 aa9.14□□□□□ -0.95
TDP1-203ENST00000393454 RBM12Q9NTZ6 932 aaKnown RBP9.14□□□□□ -0.95
TDP1-203ENST00000393454 TJP2Q9UDY2 1190 aa9.14□□□□□ -0.95
TDP1-203ENST00000393454 IP6K2Q9UHH9 426 aa9.14□□□□□ -0.95
TDP1-203ENST00000393454 TIMM13Q9Y5L4 95 aaPredicted RBP9.14□□□□□ -0.95
TDP1-203ENST00000393454 BRCA2P51587 3418 aa9.14□□□□□ -0.95
TDP1-203ENST00000393454 CCDC66A2RUB6 948 aa9.13□□□□□ -0.95
TDP1-203ENST00000393454 DCDC2CA8MYV0 355 aa9.13□□□□□ -0.95
TDP1-203ENST00000393454 C9IYK1 514 aa9.13□□□□□ -0.95
TDP1-203ENST00000393454 NBNO60934 754 aa9.13□□□□□ -0.95
TDP1-203ENST00000393454 B3GAT3O94766 335 aa9.13□□□□□ -0.95
TDP1-203ENST00000393454 FGGP02679 453 aa9.13□□□□□ -0.95
TDP1-203ENST00000393454 ERBB2P04626 1255 aa9.13□□□□□ -0.95
TDP1-203ENST00000393454 ACAT1P24752 427 aaKnown RBP9.13□□□□□ -0.95
TDP1-203ENST00000393454 RGS7P49802 495 aa9.13□□□□□ -0.95
TDP1-203ENST00000393454 TAP1Q03518 808 aa9.13□□□□□ -0.95
TDP1-203ENST00000393454 TUSC3Q13454 348 aa9.13□□□□□ -0.95
TDP1-203ENST00000393454 UPP1Q16831 310 aa9.13□□□□□ -0.95
TDP1-203ENST00000393454 LONRF2Q1L5Z9 754 aa9.13□□□□□ -0.95
TDP1-203ENST00000393454 PAN2Q504Q3 1202 aaKnown RBP9.13□□□□□ -0.95
TDP1-203ENST00000393454 DCAF12L1Q5VU92 463 aa9.13□□□□□ -0.95
TDP1-203ENST00000393454 DAB2IPQ5VWQ8 1189 aa9.13□□□□□ -0.95
TDP1-203ENST00000393454 SLC39A5Q6ZMH5 540 aa9.13□□□□□ -0.95
TDP1-203ENST00000393454 ZNF598Q86UK7 904 aaKnown RBP9.13□□□□□ -0.95
TDP1-203ENST00000393454 C3orf20Q8ND61 904 aa9.13□□□□□ -0.95
TDP1-203ENST00000393454 C3orf58Q8NDZ4 430 aa9.13□□□□□ -0.95
TDP1-203ENST00000393454 DBF4BQ8NFT6 615 aa9.13□□□□□ -0.95
TDP1-203ENST00000393454 URGCPQ8TCY9 931 aa9.13□□□□□ -0.95
TDP1-203ENST00000393454 ACTRT1Q8TDG2 376 aa9.13□□□□□ -0.95
TDP1-203ENST00000393454 UBE2Q2Q8WVN8 375 aa9.13□□□□□ -0.95
TDP1-203ENST00000393454 LINC01599Q8WXQ3 324 aa9.13□□□□□ -0.95
TDP1-203ENST00000393454 ALG3Q92685 438 aa9.13□□□□□ -0.95
TDP1-203ENST00000393454 DDX27Q96GQ7 796 aaKnown RBP9.13□□□□□ -0.95
TDP1-203ENST00000393454 RNPC3Q96LT9 517 aaKnown RBP9.13□□□□□ -0.95
TDP1-203ENST00000393454 AP1M1Q9BXS5 423 aa9.13□□□□□ -0.95
TDP1-203ENST00000393454 CARD9Q9H257 536 aa9.13□□□□□ -0.95
TDP1-203ENST00000393454 ANKZF1Q9H8Y5 726 aa9.13□□□□□ -0.95
TDP1-203ENST00000393454 ARGLU1Q9NWB6 273 aaPredicted RBP9.13□□□□□ -0.95
TDP1-203ENST00000393454 WDR35Q9P2L0 1181 aa9.13□□□□□ -0.95
TDP1-203ENST00000393454 PCDHA3Q9Y5H8 950 aa9.13□□□□□ -0.95
TDP1-203ENST00000393454 TMEM191CA6NGB0 347 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 I3L4J1 428 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 KRIT1O00522 736 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 PFKMP08237 780 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 KRT3P12035 628 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 CTNNA2P26232 953 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 CTNNA1P35221 906 aaKnown RBP9.12□□□□□ -0.95
TDP1-203ENST00000393454 GJC1P36383 396 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 CDR1P51861 262 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 RWDD2BP57060 319 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 MRPS25P82663 173 aaKnown RBP9.12□□□□□ -0.95
TDP1-203ENST00000393454 RNASELQ05823 741 aaKnown RBP9.12□□□□□ -0.95
TDP1-203ENST00000393454 ITIH3Q06033 890 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 ZNF268Q14587 947 aaPredicted RBP9.12□□□□□ -0.95
TDP1-203ENST00000393454 ZFYVE27Q5T4F4 411 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 SEL1L2Q5TEA6 688 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 OR6B2Q6IFH4 312 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 AADACL2Q6P093 401 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 FBXO38Q6PIJ6 1188 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 LIMS2Q7Z4I7 341 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 ADAT2Q7Z6V5 191 aaKnown RBP9.12□□□□□ -0.95
TDP1-203ENST00000393454 CTU1Q7Z7A3 348 aaKnown RBP9.12□□□□□ -0.95
TDP1-203ENST00000393454 TTC30AQ86WT1 665 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 XYLT1Q86Y38 959 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 CRYBG2Q8N1P7 616 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 RASGEF1CQ8N431 466 aa9.12□□□□□ -0.95
TDP1-203ENST00000393454 MMGT1Q8N4V1 131 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms