RNA–Protein interactions for RNA: ENST00000393408.7

CBX1-202, Transcript of chromobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX1, Length 2,422 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-202ENST00000393408 ANKMY2Q8IV38 441 aa19.83■□□□□ 0.77
CBX1-202ENST00000393408 C10orf82Q8WW14 230 aa19.83■□□□□ 0.77
CBX1-202ENST00000393408 MRRFQ96E11 262 aaKnown RBP19.83■□□□□ 0.77
CBX1-202ENST00000393408 SSU72Q9NP77 194 aaKnown RBP19.83■□□□□ 0.77
CBX1-202ENST00000393408 CISHQ9NSE2 258 aa19.83■□□□□ 0.77
CBX1-202ENST00000393408 RABGEF1Q9UJ41 708 aa19.83■□□□□ 0.77
CBX1-202ENST00000393408 MYL6P60660 151 aa19.83■□□□□ 0.76
CBX1-202ENST00000393408 CAPSQ13938 189 aa19.83■□□□□ 0.76
CBX1-202ENST00000393408 ACAD9Q9H845 621 aa19.83■□□□□ 0.76
CBX1-202ENST00000393408 TTLL13PA6NNM8 815 aa19.82■□□□□ 0.76
CBX1-202ENST00000393408 GOLGA8SH3BPF8 625 aa19.82■□□□□ 0.76
CBX1-202ENST00000393408 GOLGA8MH3BSY2 632 aa19.82■□□□□ 0.76
CBX1-202ENST00000393408 FAM189A1O60320 539 aa19.82■□□□□ 0.76
CBX1-202ENST00000393408 DIAPH2O60879 1101 aa19.82■□□□□ 0.76
CBX1-202ENST00000393408 DCTN3O75935 186 aa19.82■□□□□ 0.76
CBX1-202ENST00000393408 FGFR1P11362 822 aa19.82■□□□□ 0.76
CBX1-202ENST00000393408 SLC8A3P57103 927 aa19.82■□□□□ 0.76
CBX1-202ENST00000393408 GEMIN4P57678 1058 aaKnown RBP19.82■□□□□ 0.76
CBX1-202ENST00000393408 ZNF394Q53GI3 561 aa19.82■□□□□ 0.76
CBX1-202ENST00000393408 CYP4A22Q5TCH4 519 aa19.82■□□□□ 0.76
CBX1-202ENST00000393408 HHATQ5VTY9 493 aa19.82■□□□□ 0.76
CBX1-202ENST00000393408 POLNQ7Z5Q5 900 aa19.82■□□□□ 0.76
CBX1-202ENST00000393408 PCGF5Q86SE9 256 aa19.82■□□□□ 0.76
CBX1-202ENST00000393408 MAB21L3Q8N8X9 362 aa19.82■□□□□ 0.76
CBX1-202ENST00000393408 TFAP2BQ92481 460 aa19.82■□□□□ 0.76
CBX1-202ENST00000393408 PHACTR1Q9C0D0 580 aa19.82■□□□□ 0.76
CBX1-202ENST00000393408 MTMR12Q9C0I1 747 aa19.82■□□□□ 0.76
CBX1-202ENST00000393408 NIF3L1Q9GZT8 377 aa19.82■□□□□ 0.76
CBX1-202ENST00000393408 FETUBQ9UGM5 382 aa19.82■□□□□ 0.76
CBX1-202ENST00000393408 PCDHGC3Q9UN70 934 aa19.82■□□□□ 0.76
CBX1-202ENST00000393408 ADCY3O60266 1144 aa19.82■□□□□ 0.76
CBX1-202ENST00000393408 EIF4BP23588 611 aaKnown RBP19.82■□□□□ 0.76
CBX1-202ENST00000393408 ALDH3A1P30838 453 aa19.82■□□□□ 0.76
CBX1-202ENST00000393408 GAD2Q05329 585 aa19.82■□□□□ 0.76
CBX1-202ENST00000393408 GRM1Q13255 1194 aa19.82■□□□□ 0.76
CBX1-202ENST00000393408 CRYMQ14894 314 aa19.82■□□□□ 0.76
CBX1-202ENST00000393408 AGGF1Q8N302 714 aaeCLIP19.82■□□□□ 0.76
CBX1-202ENST00000393408 ZNF280CQ8ND82 737 aa19.82■□□□□ 0.76
CBX1-202ENST00000393408 MIEF2Q96C03 454 aa19.82■□□□□ 0.76
CBX1-202ENST00000393408 TEX13BQ9BXU2 312 aa19.82■□□□□ 0.76
CBX1-202ENST00000393408 ADAM33Q9BZ11 813 aa19.82■□□□□ 0.76
CBX1-202ENST00000393408 CYLDQ9NQC7 956 aa19.82■□□□□ 0.76
CBX1-202ENST00000393408 SNCAIPQ9Y6H5 919 aa19.82■□□□□ 0.76
CBX1-202ENST00000393408 DPEP1P16444 411 aa19.81■□□□□ 0.76
CBX1-202ENST00000393408 TARSP26639 723 aaKnown RBP19.81■□□□□ 0.76
CBX1-202ENST00000393408 CTCFP49711 727 aaPredicted RBP19.81■□□□□ 0.76
CBX1-202ENST00000393408 ZNF280AP59817 542 aaPredicted RBP19.81■□□□□ 0.76
CBX1-202ENST00000393408 ANKRD22Q5VYY1 191 aa19.81■□□□□ 0.76
CBX1-202ENST00000393408 LVRNQ6Q4G3 990 aa19.81■□□□□ 0.76
CBX1-202ENST00000393408 ZPBP2Q6X784 338 aa19.81■□□□□ 0.76
CBX1-202ENST00000393408 PPIL6Q8IXY8 311 aa19.81■□□□□ 0.76
CBX1-202ENST00000393408 SCYL3Q8IZE3 742 aa19.81■□□□□ 0.76
CBX1-202ENST00000393408 ACTL9Q8TC94 416 aa19.81■□□□□ 0.76
CBX1-202ENST00000393408 INPP5DQ92835 1189 aa19.81■□□□□ 0.76
CBX1-202ENST00000393408 SAE1Q9UBE0 346 aaPredicted RBP19.81■□□□□ 0.76
CBX1-202ENST00000393408 ZMYND8Q9ULU4 1186 aaPredicted RBP19.81■□□□□ 0.76
CBX1-202ENST00000393408 EFR3BQ9Y2G0 817 aa19.81■□□□□ 0.76
CBX1-202ENST00000393408 KRT4P19013 534 aa19.81■□□□□ 0.76
CBX1-202ENST00000393408 ICAM3P32942 547 aa19.81■□□□□ 0.76
CBX1-202ENST00000393408 RFC5P40937 340 aa19.81■□□□□ 0.76
CBX1-202ENST00000393408 PSMC4P43686 418 aa19.81■□□□□ 0.76
CBX1-202ENST00000393408 HMGCS2P54868 508 aa19.81■□□□□ 0.76
CBX1-202ENST00000393408 GDF10P55107 478 aa19.81■□□□□ 0.76
CBX1-202ENST00000393408 OTUD4Q01804 1114 aaKnown RBP19.81■□□□□ 0.76
CBX1-202ENST00000393408 SLC25A11Q02978 314 aaKnown RBP19.81■□□□□ 0.76
CBX1-202ENST00000393408 EFTUD2Q15029 972 aaKnown RBP eCLIP19.81■□□□□ 0.767e-7■■■■■ 27.5
CBX1-202ENST00000393408 MSS51Q4VC12 460 aa19.81■□□□□ 0.76
CBX1-202ENST00000393408 FNBP1LQ5T0N5 605 aa19.81■□□□□ 0.76
CBX1-202ENST00000393408 NBPF12Q5TAG4 269 aaPredicted RBP19.81■□□□□ 0.76
CBX1-202ENST00000393408 OTOAQ7RTW8 1153 aa19.81■□□□□ 0.76
CBX1-202ENST00000393408 CPT1BQ92523 772 aa19.81■□□□□ 0.76
CBX1-202ENST00000393408 ZNF75CPQ92670 426 aaPredicted RBP19.81■□□□□ 0.76
CBX1-202ENST00000393408 C12orf42Q96LP6 360 aa19.81■□□□□ 0.76
CBX1-202ENST00000393408 TMEM237Q96Q45 408 aa19.81■□□□□ 0.76
CBX1-202ENST00000393408 DHRS4Q9BTZ2 278 aa19.81■□□□□ 0.76
CBX1-202ENST00000393408 AS3MTQ9HBK9 375 aa19.81■□□□□ 0.76
CBX1-202ENST00000393408 HAO1Q9UJM8 370 aa19.81■□□□□ 0.76
CBX1-202ENST00000393408 IGKV6D-21A0A0A0MT36 114 aa19.8■□□□□ 0.76
CBX1-202ENST00000393408 ZWINTO95229 277 aa19.8■□□□□ 0.76
CBX1-202ENST00000393408 T-ENOLP0DO92 83 aa19.8■□□□□ 0.76
CBX1-202ENST00000393408 SSTR1P30872 391 aa19.8■□□□□ 0.76
CBX1-202ENST00000393408 DYNLT1P63172 113 aa19.8■□□□□ 0.76
CBX1-202ENST00000393408 TFDP1Q14186 410 aa19.8■□□□□ 0.76
CBX1-202ENST00000393408 TARBP2Q15633 366 aaKnown RBP19.8■□□□□ 0.76
CBX1-202ENST00000393408 ZC3H12AQ5D1E8 599 aaKnown RBP19.8■□□□□ 0.76
CBX1-202ENST00000393408 NAT8LQ8N9F0 302 aa19.8■□□□□ 0.76
CBX1-202ENST00000393408 ATP11CQ8NB49 1132 aa19.8■□□□□ 0.76
CBX1-202ENST00000393408 ZNF570Q96NI8 536 aa19.8■□□□□ 0.76
CBX1-202ENST00000393408 WDR83Q9BRX9 315 aaKnown RBP19.8■□□□□ 0.76
CBX1-202ENST00000393408 AGTPBP1Q9UPW5 1226 aa19.8■□□□□ 0.76
CBX1-202ENST00000393408 ATP2A2P16615 1042 aaKnown RBP19.8■□□□□ 0.76
CBX1-202ENST00000393408 PHBP35232 272 aa19.8■□□□□ 0.76
CBX1-202ENST00000393408 RFC1P35251 1148 aaPredicted RBP19.8■□□□□ 0.76
CBX1-202ENST00000393408 ARL4CP56559 192 aa19.8■□□□□ 0.76
CBX1-202ENST00000393408 SGSM1Q2NKQ1 1148 aa19.8■□□□□ 0.76
CBX1-202ENST00000393408 ADGRD1Q6QNK2 874 aa19.8■□□□□ 0.76
CBX1-202ENST00000393408 ZBTB33Q86T24 672 aa19.8■□□□□ 0.76
CBX1-202ENST00000393408 ARFGAP1Q8N6T3 406 aa19.8■□□□□ 0.76
CBX1-202ENST00000393408 PYROXD1Q8WU10 500 aa19.8■□□□□ 0.76
CBX1-202ENST00000393408 FRMD8P1Q9BZ68 369 aaPredicted RBP19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms