RNA–Protein interactions for RNA: ENST00000392770.6

SCN3B-202, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 6,061 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-202ENST00000392770 CCDC78A2IDD5 438 aa17.34■□□□□ 0.37
SCN3B-202ENST00000392770 ACVR2BQ13705 512 aa17.34■□□□□ 0.37
SCN3B-202ENST00000392770 CBWD6Q4V339 395 aa17.34■□□□□ 0.37
SCN3B-202ENST00000392770 CBWD3Q5JTY5 395 aa17.34■□□□□ 0.37
SCN3B-202ENST00000392770 CBWD5Q5RIA9 395 aa17.34■□□□□ 0.37
SCN3B-202ENST00000392770 ETNPPLQ8TBG4 499 aa17.34■□□□□ 0.37
SCN3B-202ENST00000392770 PABPC5Q96DU9 382 aaKnown RBP17.34■□□□□ 0.37
SCN3B-202ENST00000392770 KPNA6O60684 536 aa17.33■□□□□ 0.37
SCN3B-202ENST00000392770 BMP6P22004 513 aa17.33■□□□□ 0.37
SCN3B-202ENST00000392770 MAPK7Q13164 816 aa17.33■□□□□ 0.37
SCN3B-202ENST00000392770 TMEM132BQ14DG7 1078 aa17.33■□□□□ 0.37
SCN3B-202ENST00000392770 HABP4Q5JVS0 413 aaKnown RBP17.33■□□□□ 0.37
SCN3B-202ENST00000392770 ZBTB45Q96K62 511 aaPredicted RBP17.33■□□□□ 0.37
SCN3B-202ENST00000392770 YDJCA8MPS7 323 aa17.33■□□□□ 0.37
SCN3B-202ENST00000392770 ZWINTO95229 277 aa17.33■□□□□ 0.37
SCN3B-202ENST00000392770 MAPRE1Q15691 268 aaKnown RBP17.33■□□□□ 0.37
SCN3B-202ENST00000392770 KYNUQ16719 465 aa17.33■□□□□ 0.37
SCN3B-202ENST00000392770 FASTKD1Q53R41 847 aaKnown RBP17.33■□□□□ 0.37
SCN3B-202ENST00000392770 STKLD1Q8NE28 680 aa17.33■□□□□ 0.37
SCN3B-202ENST00000392770 IL31RAQ8NI17 732 aa17.33■□□□□ 0.37
SCN3B-202ENST00000392770 TFB1MQ8WVM0 346 aaKnown RBP17.33■□□□□ 0.37
SCN3B-202ENST00000392770 TCP11X1B4DZS4 312 aa17.33■□□□□ 0.36
SCN3B-202ENST00000392770 PPP1R11O60927 126 aaPredicted RBP17.33■□□□□ 0.36
SCN3B-202ENST00000392770 BOLA3Q53S33 107 aa17.33■□□□□ 0.36
SCN3B-202ENST00000392770 CELF3Q5SZQ8 465 aaKnown RBP17.33■□□□□ 0.36
SCN3B-202ENST00000392770 IL31Q6EBC2 164 aa17.33■□□□□ 0.36
SCN3B-202ENST00000392770 PCSK9Q8NBP7 692 aaKnown RBP17.33■□□□□ 0.36
SCN3B-202ENST00000392770 PPWD1Q96BP3 646 aaKnown RBP17.33■□□□□ 0.36
SCN3B-202ENST00000392770 FOXP3Q9BZS1 431 aa17.33■□□□□ 0.36
SCN3B-202ENST00000392770 CYP3A43Q9HB55 503 aa17.33■□□□□ 0.36
SCN3B-202ENST00000392770 KRT82Q9NSB4 513 aa17.33■□□□□ 0.36
SCN3B-202ENST00000392770 ADCY3O60266 1144 aa17.33■□□□□ 0.36
SCN3B-202ENST00000392770 HAUS5O94927 633 aa17.33■□□□□ 0.36
SCN3B-202ENST00000392770 ABRAQ8N0Z2 381 aa17.33■□□□□ 0.36
SCN3B-202ENST00000392770 GBP5Q96PP8 586 aa17.33■□□□□ 0.36
SCN3B-202ENST00000392770 MTM1Q13496 603 aa17.33■□□□□ 0.36
SCN3B-202ENST00000392770 PCSK7Q16549 785 aa17.33■□□□□ 0.36
SCN3B-202ENST00000392770 C10orf120Q5SQS8 335 aa17.33■□□□□ 0.36
SCN3B-202ENST00000392770 FGFR1OP2Q9NVK5 253 aa17.33■□□□□ 0.36
SCN3B-202ENST00000392770 LSM7Q9UK45 103 aaKnown RBP17.33■□□□□ 0.36
SCN3B-202ENST00000392770 SMG5Q9UPR3 1016 aaKnown RBP17.33■□□□□ 0.36
SCN3B-202ENST00000392770 ASTN1O14525 1302 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 DIAPH2O60879 1101 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 B3GAT3O94766 335 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 ECM1Q16610 540 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 C3orf62Q6ZUJ4 267 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 DNAJC19Q96DA6 116 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 LRRC37BQ96QE4 947 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 MUC3BQ9H195 1237 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 RGPD2P0DJD1 1756 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 GYG2O15488 501 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 CDH16O75309 829 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 CYBBP04839 570 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 BCAT1P54687 386 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 DLG4P78352 724 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 PTPN11Q06124 597 aaPredicted RBP17.32■□□□□ 0.36
SCN3B-202ENST00000392770 TFDP3Q5H9I0 405 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 C4orf33Q8N1A6 199 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 KRT35Q92764 455 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 MTG1Q9BT17 334 aaPredicted RBP17.32■□□□□ 0.36
SCN3B-202ENST00000392770 ABHD16BQ9H3Z7 469 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 VIRMAQ69YN4 1812 aaKnown RBP17.32■□□□□ 0.36
SCN3B-202ENST00000392770 TFRCP02786 760 aaKnown RBP17.32■□□□□ 0.36
SCN3B-202ENST00000392770 THP07101 528 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 HSD17B3P37058 310 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 CTCFP49711 727 aaPredicted RBP17.32■□□□□ 0.36
SCN3B-202ENST00000392770 ARHGAP18Q8N392 663 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 HASPINQ8TF76 798 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 EPN3Q9H201 632 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 PORCNQ9H237 461 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 NEMP1O14524 444 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 PROSCO94903 275 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 MAP3K7CLP57077 242 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 PTK7Q13308 1070 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 KRT33BQ14525 404 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 ANKRD20A4Q4UJ75 823 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 ANKRD20A8PQ5CZ79 823 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 ANKRD20A2Q5SQ80 823 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 ANKRD20A1Q5TYW2 823 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 MTHFD1LQ6UB35 978 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 FAM172AQ8WUF8 416 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 HNRNPLLQ8WVV9 542 aaKnown RBP17.32■□□□□ 0.36
SCN3B-202ENST00000392770 COLEC11Q9BWP8 271 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 WDCPQ9H6R7 721 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 ECT2Q9H8V3 914 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 ADAMTSL3P82987 1691 aa17.32■□□□□ 0.36
SCN3B-202ENST00000392770 LGALS2P05162 132 aa17.31■□□□□ 0.36
SCN3B-202ENST00000392770 AKAP5P24588 427 aa17.31■□□□□ 0.36
SCN3B-202ENST00000392770 MDH1BQ5I0G3 518 aa17.31■□□□□ 0.36
SCN3B-202ENST00000392770 TDRD10Q5VZ19 366 aaKnown RBP17.31■□□□□ 0.36
SCN3B-202ENST00000392770 C4orf32Q8N8J7 132 aa17.31■□□□□ 0.36
SCN3B-202ENST00000392770 INTS13Q9NVM9 706 aa17.31■□□□□ 0.36
SCN3B-202ENST00000392770 TRIM33Q9UPN9 1127 aa17.31■□□□□ 0.36
SCN3B-202ENST00000392770 SIK3Q9Y2K2 1263 aa17.31■□□□□ 0.36
SCN3B-202ENST00000392770 LACTBL1A8MY62 500 aa17.31■□□□□ 0.36
SCN3B-202ENST00000392770 ATP5HO75947 161 aa17.31■□□□□ 0.36
SCN3B-202ENST00000392770 ZPBP2Q6X784 338 aa17.31■□□□□ 0.36
SCN3B-202ENST00000392770 MCOLN2Q8IZK6 566 aa17.31■□□□□ 0.36
SCN3B-202ENST00000392770 GPATCH2LQ9NWQ4 482 aa17.31■□□□□ 0.36
SCN3B-202ENST00000392770 NFASCO94856 1347 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms