RNA–Protein interactions for RNA: ENST00000392542.6

RFC5-201, Transcript of replication factor C subunit 5, humanhuman

TSL 2 BASIC

Gene RFC5, Length 2,449 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5-201ENST00000392542 RASA4BC9J798 803 aa12.96□□□□□ -0.33
RFC5-201ENST00000392542 RASA4O43374 803 aa12.96□□□□□ -0.33
RFC5-201ENST00000392542 MED7O43513 233 aa12.96□□□□□ -0.33
RFC5-201ENST00000392542 CNMDO75829 334 aa12.96□□□□□ -0.33
RFC5-201ENST00000392542 CD19P15391 556 aa12.96□□□□□ -0.33
RFC5-201ENST00000392542 RFC1P35251 1148 aaPredicted RBP12.96□□□□□ -0.33
RFC5-201ENST00000392542 GTF2A1P52655 376 aaPredicted RBP12.96□□□□□ -0.33
RFC5-201ENST00000392542 OSTNP61366 133 aa12.96□□□□□ -0.33
RFC5-201ENST00000392542 IRX3P78415 501 aaPredicted RBP12.96□□□□□ -0.33
RFC5-201ENST00000392542 SLC25A11Q02978 314 aaKnown RBP12.96□□□□□ -0.33
RFC5-201ENST00000392542 WDR72Q3MJ13 1102 aa12.96□□□□□ -0.33
RFC5-201ENST00000392542 PARP9Q8IXQ6 854 aa12.96□□□□□ -0.33
RFC5-201ENST00000392542 CEP120Q8N960 986 aa12.96□□□□□ -0.33
RFC5-201ENST00000392542 JOSD2Q8TAC2 188 aa12.96□□□□□ -0.33
RFC5-201ENST00000392542 FGD4Q96M96 766 aa12.96□□□□□ -0.33
RFC5-201ENST00000392542 TGS1Q96RS0 853 aaKnown RBP12.96□□□□□ -0.33
RFC5-201ENST00000392542 EFR3BQ9Y2G0 817 aa12.96□□□□□ -0.33
RFC5-201ENST00000392542 CSADQ9Y600 493 aa12.96□□□□□ -0.33
RFC5-201ENST00000392542 INO80B-WBP1J3KQ70 363 aa12.96□□□□□ -0.34
RFC5-201ENST00000392542 ALOX15BO15296 676 aa12.96□□□□□ -0.34
RFC5-201ENST00000392542 B4GALT5O43286 388 aa12.96□□□□□ -0.34
RFC5-201ENST00000392542 IL18RAPO95256 599 aa12.96□□□□□ -0.34
RFC5-201ENST00000392542 KRT7P08729 469 aa12.96□□□□□ -0.34
RFC5-201ENST00000392542 KRT3P12035 628 aa12.96□□□□□ -0.34
RFC5-201ENST00000392542 RAP1GAPP47736 663 aa12.96□□□□□ -0.34
RFC5-201ENST00000392542 FASTKD3Q14CZ7 662 aaKnown RBP12.96□□□□□ -0.34
RFC5-201ENST00000392542 TMEM132AQ24JP5 1023 aa12.96□□□□□ -0.34
RFC5-201ENST00000392542 SPATA21Q7Z572 469 aa12.96□□□□□ -0.34
RFC5-201ENST00000392542 TRABD2AQ86V40 505 aa12.96□□□□□ -0.34
RFC5-201ENST00000392542 FNIP1Q8TF40 1166 aa12.96□□□□□ -0.34
RFC5-201ENST00000392542 NLRP4Q96MN2 994 aa12.96□□□□□ -0.34
RFC5-201ENST00000392542 TMEM121Q9BTD3 319 aa12.96□□□□□ -0.34
RFC5-201ENST00000392542 BCO2Q9BYV7 579 aa12.96□□□□□ -0.34
RFC5-201ENST00000392542 INO80BQ9C086 356 aaPredicted RBP12.96□□□□□ -0.34
RFC5-201ENST00000392542 CDT1Q9H211 546 aa12.96□□□□□ -0.34
RFC5-201ENST00000392542 R3HDMLQ9H3Y0 253 aa12.96□□□□□ -0.34
RFC5-201ENST00000392542 UBN1Q9NPG3 1134 aa12.96□□□□□ -0.34
RFC5-201ENST00000392542 NXF1Q9UBU9 619 aaKnown RBP12.96□□□□□ -0.34
RFC5-201ENST00000392542 CYTH4Q9UIA0 394 aa12.96□□□□□ -0.34
RFC5-201ENST00000392542 FAM47DPA6NHR8 397 aa12.95□□□□□ -0.34
RFC5-201ENST00000392542 SGK1O00141 431 aa12.95□□□□□ -0.34
RFC5-201ENST00000392542 LRCH4O75427 683 aa12.95□□□□□ -0.34
RFC5-201ENST00000392542 GSCP56915 257 aaPredicted RBP12.95□□□□□ -0.34
RFC5-201ENST00000392542 PSMC1P62191 440 aaKnown RBP12.95□□□□□ -0.34
RFC5-201ENST00000392542 PLCB3Q01970 1234 aa12.95□□□□□ -0.34
RFC5-201ENST00000392542 HADHQ16836 314 aaKnown RBP12.95□□□□□ -0.34
RFC5-201ENST00000392542 ZNF667Q5HYK9 610 aa12.95□□□□□ -0.34
RFC5-201ENST00000392542 CENPUQ71F23 418 aa12.95□□□□□ -0.34
RFC5-201ENST00000392542 GPC2Q8N158 579 aa12.95□□□□□ -0.34
RFC5-201ENST00000392542 TRAPPC12Q8WVT3 735 aa12.95□□□□□ -0.34
RFC5-201ENST00000392542 PRCCQ92733 491 aaPredicted RBP12.95□□□□□ -0.34
RFC5-201ENST00000392542 ZNF668Q96K58 619 aaPredicted RBP12.95□□□□□ -0.34
RFC5-201ENST00000392542 PLCD4Q9BRC7 762 aa12.95□□□□□ -0.34
RFC5-201ENST00000392542 FRMD8P1Q9BZ68 369 aaPredicted RBP12.95□□□□□ -0.34
RFC5-201ENST00000392542 RPF1Q9H9Y2 349 aaKnown RBP12.95□□□□□ -0.34
RFC5-201ENST00000392542 TJP2Q9UDY2 1190 aa12.95□□□□□ -0.34
RFC5-201ENST00000392542 AGTPBP1Q9UPW5 1226 aa12.95□□□□□ -0.34
RFC5-201ENST00000392542 TNFSF13BQ9Y275 285 aa12.95□□□□□ -0.34
RFC5-201ENST00000392542 A0A0G2JLL6 359 aaPredicted RBP12.94□□□□□ -0.34
RFC5-201ENST00000392542 IRF6O14896 467 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 CHUKO15111 745 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 SLC25A27O95847 323 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 IFNB1P01574 187 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 PGK2P07205 417 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 GJB1P08034 283 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 KRT19P08727 400 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 CXCL8P10145 99 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 IL1R2P27930 398 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 RAD23BP54727 409 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 IL9RQ01113 521 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 MBTD1Q05BQ5 628 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 ADCY1Q08828 1119 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 SNCBQ16143 134 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 TAZQ16635 292 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 FAM133BQ5BKY9 247 aaKnown RBP12.94□□□□□ -0.34
RFC5-201ENST00000392542 DLK2Q6UY11 383 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 PRRT2Q7Z6L0 340 aaPredicted RBP12.94□□□□□ -0.34
RFC5-201ENST00000392542 PCGF5Q86SE9 256 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 CDR2LQ86X02 465 aaPredicted RBP12.94□□□□□ -0.34
RFC5-201ENST00000392542 DHX37Q8IY37 1157 aaKnown RBP12.94□□□□□ -0.34
RFC5-201ENST00000392542 ARFGAP1Q8N6T3 406 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 CCDC63Q8NA47 563 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 TTC13Q8NBP0 860 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 FAXDC2Q96IV6 333 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 SPATA33Q96N06 139 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 ZWILCHQ9H900 591 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 WDR35Q9P2L0 1181 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 PRKAG3Q9UGI9 489 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 SIX4Q9UIU6 781 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 ARL2BPQ9Y2Y0 163 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 FARP1Q9Y4F1 1045 aaPredicted RBP12.94□□□□□ -0.34
RFC5-201ENST00000392542 POC1B-GALNT4F8VUJ3 575 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 UBOX5O94941 541 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 TAC1P20366 129 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 SLC26A2P50443 739 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 DYNLT1P63172 113 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 OTUD4Q01804 1114 aaKnown RBP12.94□□□□□ -0.34
RFC5-201ENST00000392542 ZKSCAN8Q15776 578 aaPredicted RBP12.94□□□□□ -0.34
RFC5-201ENST00000392542 SMTNL2Q2TAL5 461 aa12.94□□□□□ -0.34
RFC5-201ENST00000392542 BBS12Q6ZW61 710 aa12.94□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms