RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 PSTPIP1O43586 416 aa12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 PYGMP11217 842 aa12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 YY1P25490 414 aa12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 LILRA4P59901 499 aa12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 HTRA3P83110 453 aa12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 PDCLQ13371 301 aa12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 MAP9Q49MG5 647 aa12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 ZNF618Q5T7W0 954 aa12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 CYP4A22Q5TCH4 519 aa12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 CCNI2Q6ZMN8 369 aaPredicted RBP12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 KLHL7Q8IXQ5 586 aa12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 TOP6BLQ8N6T0 577 aa12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 KBTBD7Q8WVZ9 684 aa12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 MCEEQ96PE7 176 aa12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 GAD1Q99259 594 aa12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 SLITRK6Q9H5Y7 841 aa12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 PTCH2Q9Y6C5 1203 aa12.11□□□□□ -0.47
SMARCAL1-203ENST00000392128 GOLGA6L10A0A0M3HER8 536 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 A0A0U1RQF3 1178 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 SIGLEC16A6NMB1 481 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 MGEA5O60502 916 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 GJB6O95452 261 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 THP07101 528 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 FAM163BP0C2L3 166 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 SLC7A5Q01650 507 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 ZNF268Q14587 947 aaPredicted RBP12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 PKDCCQ504Y2 493 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 ARHGAP17Q68EM7 881 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 DCUN1D2Q6PH85 259 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 AGMOQ6ZNB7 445 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 DPH6Q7L8W6 267 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 ACOT1Q86TX2 421 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 XYLT1Q86Y38 959 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 RHOT1Q8IXI2 618 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 NIPA2Q8N8Q9 360 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 APPL2Q8NEU8 664 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 OR6B3Q8NGW1 331 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 DNAI2Q9GZS0 605 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 MIS12Q9H081 205 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 STARD7Q9NQZ5 370 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 PHF24Q9UPV7 400 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 TDRD15B5MCY1 1934 aaKnown RBP12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 ARL5CA6NH57 179 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 SART1O43290 800 aaKnown RBP12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 RAD51CO43502 376 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 ZMYND10O75800 440 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 ERBB2P04626 1255 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 CKBP12277 381 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 SKIP12755 728 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 PSMC1P62191 440 aaKnown RBP12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 ZNF252P-AS1Q0IIN9 211 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 PIGHQ14442 188 aaPredicted RBP12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 PPP1R26Q5T8A7 1209 aaPredicted RBP12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 AADACL2Q6P093 401 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 CRYBG2Q8N1P7 616 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 C12orf29Q8N999 325 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 FNIP1Q8TF40 1166 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 LPPQ93052 612 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 DDX27Q96GQ7 796 aaKnown RBP12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 TSPYL2Q9H2G4 693 aaPredicted RBP12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 SYNCQ9H7C4 482 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 GDF3Q9NR23 364 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 L1RE1Q9UN81 338 aa12.1□□□□□ -0.47
SMARCAL1-203ENST00000392128 A8MXQ7 604 aa12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 HUS1O60921 280 aa12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 HEXIM1O94992 359 aaKnown RBP12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 GLI1P08151 1106 aa12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 PFKMP08237 780 aa12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 SETSIPP0DME0 302 aa12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 FGFR1P11362 822 aa12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 WARSP23381 471 aaKnown RBP12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 GNL1P36915 607 aaPredicted RBP12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 GOLGA7BQ2TAP0 167 aa12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 TRAF7Q6Q0C0 670 aa12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 SLC13A5Q86YT5 568 aaPredicted RBP12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 IFT20Q8IY31 132 aa12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 UBA3Q8TBC4 463 aa12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 MCRS1Q96EZ8 462 aa12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 FUT8Q9BYC5 575 aa12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 SEZ6LQ9BYH1 1024 aa12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 DDX47Q9H0S4 455 aaKnown RBP12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 TRPV6Q9H1D0 765 aa12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 TJP2Q9UDY2 1190 aa12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 TRIM17Q9Y577 477 aa12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 ARVCFO00192 962 aa12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 KRT3P12035 628 aa12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 TAS2R40P59535 323 aa12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 MRPS25P82663 173 aaKnown RBP12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 OGDHQ02218 1023 aa12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 KATNAL2Q8IYT4 538 aa12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 ADGRF2Q8IZF7 708 aa12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 CCDC26Q8TAB7 109 aa12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 PGBD4Q96DM1 585 aa12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 ADAM2Q99965 735 aa12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 SNX25Q9H3E2 840 aa12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 UBN1Q9NPG3 1134 aa12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 MIOSQ9NXC5 875 aa12.09□□□□□ -0.47
SMARCAL1-203ENST00000392128 FAM53CQ9NYF3 392 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms