RNA–Protein interactions for RNA: ENST00000380748.5

HMGN1-203, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 829 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-203ENST00000380748 MATR3P43243 847 aaKnown RBP eCLIP18.78■□□□□ 0.6
HMGN1-203ENST00000380748 PPP2R3AQ06190 1150 aa18.78■□□□□ 0.6
HMGN1-203ENST00000380748 TRIM29Q14134 588 aa18.78■□□□□ 0.6
HMGN1-203ENST00000380748 SOWAHCQ53LP3 525 aaPredicted RBP18.78■□□□□ 0.6
HMGN1-203ENST00000380748 C19orf48Q6RUI8 117 aa18.78■□□□□ 0.6
HMGN1-203ENST00000380748 NSUN7Q8NE18 718 aaKnown RBP18.78■□□□□ 0.6
HMGN1-203ENST00000380748 TTC16Q8NEE8 873 aa18.78■□□□□ 0.6
HMGN1-203ENST00000380748 MDGA1Q8NFP4 955 aa18.78■□□□□ 0.6
HMGN1-203ENST00000380748 COL26A1Q96A83 441 aa18.78■□□□□ 0.6
HMGN1-203ENST00000380748 PTPRDP23468 1912 aa18.77■□□□□ 0.6
HMGN1-203ENST00000380748 HAPLN1P10915 354 aaPredicted RBP18.77■□□□□ 0.6
HMGN1-203ENST00000380748 DDX6P26196 483 aaKnown RBP eCLIP18.77■□□□□ 0.61e-5■■■□□ 17.8
HMGN1-203ENST00000380748 SEC13P55735 322 aa18.77■□□□□ 0.6
HMGN1-203ENST00000380748 LMAN2Q12907 356 aa18.77■□□□□ 0.6
HMGN1-203ENST00000380748 MTF1Q14872 753 aa18.77■□□□□ 0.6
HMGN1-203ENST00000380748 RINT1Q6NUQ1 792 aa18.77■□□□□ 0.6
HMGN1-203ENST00000380748 ZPBP2Q6X784 338 aa18.77■□□□□ 0.6
HMGN1-203ENST00000380748 PIP4P1Q86T03 277 aa18.77■□□□□ 0.6
HMGN1-203ENST00000380748 LRRTM3Q86VH5 581 aa18.77■□□□□ 0.6
HMGN1-203ENST00000380748 TMEM161BQ8NDZ6 487 aa18.77■□□□□ 0.6
HMGN1-203ENST00000380748 SNX29Q8TEQ0 813 aa18.77■□□□□ 0.6
HMGN1-203ENST00000380748 EXOC4Q96A65 974 aa18.77■□□□□ 0.6
HMGN1-203ENST00000380748 CNOT6LQ96LI5 555 aaKnown RBP18.77■□□□□ 0.6
HMGN1-203ENST00000380748 ABI2Q9NYB9 513 aaPredicted RBP18.77■□□□□ 0.6
HMGN1-203ENST00000380748 LRWD1Q9UFC0 647 aa18.77■□□□□ 0.6
HMGN1-203ENST00000380748 WNT6Q9Y6F9 365 aa18.77■□□□□ 0.6
HMGN1-203ENST00000380748 CELSR3Q9NYQ7 3312 aa18.77■□□□□ 0.59
HMGN1-203ENST00000380748 TNRC6BQ9UPQ9 1833 aaKnown RBP18.77■□□□□ 0.59
HMGN1-203ENST00000380748 PI4KAP42356 2102 aa18.76■□□□□ 0.59
HMGN1-203ENST00000380748 XPOTO43592 962 aaKnown RBP18.76■□□□□ 0.59
HMGN1-203ENST00000380748 CAPNS1P04632 268 aa18.76■□□□□ 0.59
HMGN1-203ENST00000380748 CYP11A1P05108 521 aa18.76■□□□□ 0.59
HMGN1-203ENST00000380748 MAPTP10636 758 aaKnown RBP18.76■□□□□ 0.59
HMGN1-203ENST00000380748 ENGP17813 658 aa18.76■□□□□ 0.59
HMGN1-203ENST00000380748 FXR2P51116 673 aaKnown RBP eCLIP18.76■□□□□ 0.59
HMGN1-203ENST00000380748 GUCY1B3Q02153 619 aa18.76■□□□□ 0.59
HMGN1-203ENST00000380748 ENOX2Q16206 610 aaKnown RBP18.76■□□□□ 0.59
HMGN1-203ENST00000380748 ME3Q16798 604 aa18.76■□□□□ 0.59
HMGN1-203ENST00000380748 C2orf27AQ580R0 203 aa18.76■□□□□ 0.59
HMGN1-203ENST00000380748 C1orf186Q6ZWK4 172 aa18.76■□□□□ 0.59
HMGN1-203ENST00000380748 ARMCX6Q7L4S7 300 aa18.76■□□□□ 0.59
HMGN1-203ENST00000380748 MON1AQ86VX9 555 aa18.76■□□□□ 0.59
HMGN1-203ENST00000380748 PROSER1Q86XN7 944 aa18.76■□□□□ 0.59
HMGN1-203ENST00000380748 USP33Q8TEY7 942 aa18.76■□□□□ 0.59
HMGN1-203ENST00000380748 GTF3C6Q969F1 213 aa18.76■□□□□ 0.59
HMGN1-203ENST00000380748 NTPCRQ9BSD7 190 aaKnown RBP18.76■□□□□ 0.59
HMGN1-203ENST00000380748 NUSAP1Q9BXS6 441 aaKnown RBP18.76■□□□□ 0.59
HMGN1-203ENST00000380748 C17orf75Q9HAS0 396 aa18.76■□□□□ 0.59
HMGN1-203ENST00000380748 TMEM74BQ9NUR3 256 aa18.76■□□□□ 0.59
HMGN1-203ENST00000380748 DUS2Q9NX74 493 aaKnown RBP18.76■□□□□ 0.59
HMGN1-203ENST00000380748 DNM3Q9UQ16 869 aa18.76■□□□□ 0.59
HMGN1-203ENST00000380748 GPSM3Q9Y4H4 160 aa18.76■□□□□ 0.59
HMGN1-203ENST00000380748 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.76■□□□□ 0.59
HMGN1-203ENST00000380748 GPR15P49685 360 aa18.75■□□□□ 0.59
HMGN1-203ENST00000380748 RAD51AP2Q09MP3 1159 aa18.75■□□□□ 0.59
HMGN1-203ENST00000380748 ZNF268Q14587 947 aaPredicted RBP18.75■□□□□ 0.59
HMGN1-203ENST00000380748 ZNF77Q15935 545 aa18.75■□□□□ 0.59
HMGN1-203ENST00000380748 SPATA1Q5VX52 437 aa18.75■□□□□ 0.59
HMGN1-203ENST00000380748 KCNK18Q7Z418 384 aa18.75■□□□□ 0.59
HMGN1-203ENST00000380748 TTC30AQ86WT1 665 aa18.75■□□□□ 0.59
HMGN1-203ENST00000380748 CHCHD4Q8N4Q1 142 aa18.75■□□□□ 0.59
HMGN1-203ENST00000380748 SPPL2BQ8TCT7 592 aa18.75■□□□□ 0.59
HMGN1-203ENST00000380748 OSCP1Q8WVF1 389 aa18.75■□□□□ 0.59
HMGN1-203ENST00000380748 SPIRE2Q8WWL2 714 aa18.75■□□□□ 0.59
HMGN1-203ENST00000380748 RLN3Q8WXF3 142 aa18.75■□□□□ 0.59
HMGN1-203ENST00000380748 MRPS31Q92665 395 aaKnown RBP18.75■□□□□ 0.59
HMGN1-203ENST00000380748 ATP2A3Q93084 1043 aa18.75■□□□□ 0.59
HMGN1-203ENST00000380748 FSCN3Q9NQT6 498 aa18.75■□□□□ 0.59
HMGN1-203ENST00000380748 MAGED2Q9UNF1 606 aaPredicted RBP18.75■□□□□ 0.59
HMGN1-203ENST00000380748 ATXN2Q99700 1313 aaKnown RBP18.74■□□□□ 0.59
HMGN1-203ENST00000380748 SCN1AP35498 2009 aa18.74■□□□□ 0.59
HMGN1-203ENST00000380748 HELZ2Q9BYK8 2649 aaKnown RBP18.74■□□□□ 0.59
HMGN1-203ENST00000380748 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.74■□□□□ 0.59
HMGN1-203ENST00000380748 PP2D1A8MPX8 630 aa18.74■□□□□ 0.59
HMGN1-203ENST00000380748 TADA3O75528 432 aa18.74■□□□□ 0.59
HMGN1-203ENST00000380748 HNRNPLP14866 589 aaKnown RBP eCLIP18.74■□□□□ 0.59
HMGN1-203ENST00000380748 PTGER3P43115 390 aa18.74■□□□□ 0.59
HMGN1-203ENST00000380748 IFNAR2P48551 515 aa18.74■□□□□ 0.59
HMGN1-203ENST00000380748 FAM193AP78312 1265 aa18.74■□□□□ 0.59
HMGN1-203ENST00000380748 USP4Q13107 963 aa18.74■□□□□ 0.59
HMGN1-203ENST00000380748 SEMA3BQ13214 749 aa18.74■□□□□ 0.59
HMGN1-203ENST00000380748 ORC2Q13416 577 aaPredicted RBP18.74■□□□□ 0.59
HMGN1-203ENST00000380748 EML3Q32P44 896 aa18.74■□□□□ 0.59
HMGN1-203ENST00000380748 TTC38Q5R3I4 469 aa18.74■□□□□ 0.59
HMGN1-203ENST00000380748 SDHAF4Q5VUM1 108 aa18.74■□□□□ 0.59
HMGN1-203ENST00000380748 C9orf57Q5W0N0 161 aa18.74■□□□□ 0.59
HMGN1-203ENST00000380748 JADE1Q6IE81 842 aa18.74■□□□□ 0.59
HMGN1-203ENST00000380748 PDZD3Q86UT5 571 aa18.74■□□□□ 0.59
HMGN1-203ENST00000380748 TMEFF1Q8IYR6 380 aa18.74■□□□□ 0.59
HMGN1-203ENST00000380748 CCDC33Q8N5R6 958 aa18.74■□□□□ 0.59
HMGN1-203ENST00000380748 FRMD1Q8N878 549 aa18.74■□□□□ 0.59
HMGN1-203ENST00000380748 C4orf32Q8N8J7 132 aa18.74■□□□□ 0.59
HMGN1-203ENST00000380748 OLIG1Q8TAK6 271 aa18.74■□□□□ 0.59
HMGN1-203ENST00000380748 C2orf15Q8WU43 125 aaKnown RBP18.74■□□□□ 0.59
HMGN1-203ENST00000380748 FNBP1Q96RU3 617 aa18.74■□□□□ 0.59
HMGN1-203ENST00000380748 SLC22A12Q96S37 553 aa18.74■□□□□ 0.59
HMGN1-203ENST00000380748 MMP17Q9ULZ9 603 aa18.74■□□□□ 0.59
HMGN1-203ENST00000380748 MYH11P35749 1972 aa18.73■□□□□ 0.59
HMGN1-203ENST00000380748 ASH1LQ9NR48 2969 aaKnown RBP18.73■□□□□ 0.59
HMGN1-203ENST00000380748 FAM221BA6H8Z2 402 aa18.73■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms