RNA–Protein interactions for RNA: ENST00000380107.5

TRIM6-203, Transcript of tripartite motif containing 6, humanhuman

TSL 1 (best) BASIC

Gene TRIM6, Length 2,590 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM6-203ENST00000380107 ARHGAP28Q9P2N2 729 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 PSMC3IPQ9P2W1 217 aaPredicted RBP9.18□□□□□ -0.94
TRIM6-203ENST00000380107 PCSK1NQ9UHG2 260 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 IP6K2Q9UHH9 426 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 RABGEF1Q9UJ41 708 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 SYNPO2Q9UMS6 1093 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 AGTPBP1Q9UPW5 1226 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 CHMP2BQ9UQN3 213 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 EME2A4GXA9 379 aaPredicted RBP9.18□□□□□ -0.94
TRIM6-203ENST00000380107 PIK3R2O00459 728 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 ALOX15BO15296 676 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 MAGEB2O15479 319 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 AVILO75366 819 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 MAP3K6O95382 1288 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 GARTP22102 1010 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 MMP8P22894 467 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 IL1R2P27930 398 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 ALDH3A1P30838 453 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 SFNP31947 248 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 SKIV2L2P42285 1042 aaKnown RBP9.18□□□□□ -0.94
TRIM6-203ENST00000380107 GCLCP48506 637 aaPredicted RBP9.18□□□□□ -0.94
TRIM6-203ENST00000380107 BPIFB4P59827 614 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 FSTL1Q12841 308 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 NR1H3Q13133 447 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 NCOA4Q13772 614 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 PSMD6Q15008 389 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 MDH1BQ5I0G3 518 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 GPAT2Q6NUI2 795 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 KRT27Q7Z3Y8 459 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 CLNKQ7Z7G1 428 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 CDR2LQ86X02 465 aaPredicted RBP9.18□□□□□ -0.94
TRIM6-203ENST00000380107 ZNF677Q86XU0 584 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 PHF13Q86YI8 300 aaPredicted RBP9.18□□□□□ -0.94
TRIM6-203ENST00000380107 RELL1Q8IUW5 271 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 IGDCC3Q8IVU1 814 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 RCOR2Q8IZ40 523 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 LARGE2Q8N3Y3 721 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 FBXO36Q8NEA4 188 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 TFAP2BQ92481 460 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 CPT1BQ92523 772 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 MTMR12Q9C0I1 747 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 RPAP3Q9H6T3 665 aaPredicted RBP9.18□□□□□ -0.94
TRIM6-203ENST00000380107 QTRT2Q9H974 415 aaKnown RBP9.18□□□□□ -0.94
TRIM6-203ENST00000380107 RNF146Q9NTX7 359 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 ARMCX1Q9P291 453 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 HEY2Q9UBP5 337 aa9.18□□□□□ -0.94
TRIM6-203ENST00000380107 CST8O60676 142 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 PLA2G6O60733 806 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 ZC3H11AO75152 810 aaKnown RBP eCLIP9.17□□□□□ -0.94
TRIM6-203ENST00000380107 DCTN3O75935 186 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 FAM155BO75949 473 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 TMEM63AO94886 807 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 MYCNP04198 464 aaPredicted RBP9.17□□□□□ -0.94
TRIM6-203ENST00000380107 POTEJP0CG39 1038 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 NEFHP12036 1026 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 RFC1P35251 1148 aaPredicted RBP9.17□□□□□ -0.94
TRIM6-203ENST00000380107 CDKN2BP42772 138 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 GEMIN4P57678 1058 aaKnown RBP9.17□□□□□ -0.94
TRIM6-203ENST00000380107 MYL6P60660 151 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 ACTR2P61160 394 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 OSTNP61366 133 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 BASP1P80723 227 aaKnown RBP9.17□□□□□ -0.94
TRIM6-203ENST00000380107 SP2Q02086 613 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 EMC2Q15006 297 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 ANO7Q6IWH7 933 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 UNC45BQ8IWX7 931 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 KIAA0319LQ8IZA0 1049 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 JOSD2Q8TAC2 188 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 TTC17Q96AE7 1141 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 RBM41Q96IZ5 413 aaKnown RBP9.17□□□□□ -0.94
TRIM6-203ENST00000380107 TIPINQ9BVW5 301 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 DEFB129Q9H1M3 183 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 SCINQ9Y6U3 715 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 ARID2Q68CP9 1835 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 DPPA5A6NC42 116 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 SPDYE5A6NIY4 337 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 K7ERI5 159 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 ONECUT3O60422 494 aaPredicted RBP9.17□□□□□ -0.94
TRIM6-203ENST00000380107 DGAT1O75907 488 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 LINGO3P0C6S8 592 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 KCNA2P16389 499 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 ATP4AP20648 1035 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 SERPINB3P29508 390 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 CETN2P41208 172 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 RAP1GAPP47736 663 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 BLMHQ13867 455 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 MORF4L2Q15014 288 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 CTC1Q2NKJ3 1217 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 NBPF20Q3BBV1 942 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 RAB6CQ53S08 254 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 TFDP3Q5H9I0 405 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 NPNTQ6UXI9 565 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 AGGF1Q8N302 714 aaeCLIP9.17□□□□□ -0.94
TRIM6-203ENST00000380107 RIBC1Q8N443 379 aaPredicted RBP9.17□□□□□ -0.94
TRIM6-203ENST00000380107 WDTC1Q8N5D0 677 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 ARFGAP1Q8N6T3 406 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 FAM71DQ8N9W8 422 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 ATP6V0A1Q93050 837 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 AKT1S1Q96B36 256 aa9.17□□□□□ -0.94
TRIM6-203ENST00000380107 FAM111AQ96PZ2 611 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms