RNA–Protein interactions for RNA: ENST00000379053.4

LINC00654-201, long intergenic non-protein coding RNA 654, humanhuman

TSL 1 (best) BASIC

Gene LINC00654, Length 6,113 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00654-201ENST00000379053 KANSL3Q9P2N6 904 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 NCOA3Q9Y6Q9 1424 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 CASTOR2A6NHX0 329 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 MUTP22033 750 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 PRMT2P55345 433 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 POLE2P56282 527 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 TP53BP2Q13625 1128 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 ACOT1Q86TX2 421 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 KCTD17Q8N5Z5 321 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 BLOC1S5Q8TDH9 187 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 ABTB1Q969K4 478 aaPredicted RBP11.4□□□□□ -0.58
LINC00654-201ENST00000379053 AKT1S1Q96B36 256 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 ZFYVE19Q96K21 471 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 ALG13Q9NP73 1137 aaKnown RBP11.4□□□□□ -0.58
LINC00654-201ENST00000379053 NMRK2Q9NPI5 230 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 SPASTQ9UBP0 616 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 ADGRA2Q96PE1 1338 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 CAMSAP1Q5T5Y3 1602 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 C2orf81A6NN90 581 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 PCDH8O95206 1070 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 ALOX15P16050 662 aaPredicted RBP11.4□□□□□ -0.58
LINC00654-201ENST00000379053 HNRNPH2P55795 449 aaKnown RBP11.4□□□□□ -0.58
LINC00654-201ENST00000379053 NCALDP61601 193 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 EPC2Q52LR7 807 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 LRRC23Q53EV4 343 aaPredicted RBP11.4□□□□□ -0.58
LINC00654-201ENST00000379053 TGS1Q96RS0 853 aaKnown RBP11.4□□□□□ -0.58
LINC00654-201ENST00000379053 ALDH8A1Q9H2A2 487 aaPredicted RBP11.4□□□□□ -0.58
LINC00654-201ENST00000379053 RAD18Q9NS91 495 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 NSMCE4AQ9NXX6 385 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 DTNAQ9Y4J8 743 aa11.4□□□□□ -0.58
LINC00654-201ENST00000379053 GOLGA8RI6L899 631 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 SPTLC1O15269 473 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 GLI2P10070 1586 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 SLC26A2P50443 739 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 MED21Q13503 144 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 RGS9BPQ6ZS82 235 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 ZCWPW1Q9H0M4 648 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 HPS4Q9NQG7 708 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 PAK5Q9P286 719 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 CAND2O75155 1236 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 KRT4P19013 534 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 PTGER2P43116 358 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 STK4Q13043 487 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 TSGA10IPQ3SY00 556 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 MAP3K14Q99558 947 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 TAF1DQ9H5J8 278 aaPredicted RBP11.39□□□□□ -0.59
LINC00654-201ENST00000379053 SCOCQ9UIL1 159 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 FHOD1Q9Y613 1164 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 DYRK3O43781 588 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 POLBP06746 335 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 DARSP14868 501 aaKnown RBP11.39□□□□□ -0.59
LINC00654-201ENST00000379053 NAMPTP43490 491 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 CENPAP49450 140 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 HERC6Q8IVU3 1022 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 GSPT2Q8IYD1 628 aaKnown RBP11.39□□□□□ -0.59
LINC00654-201ENST00000379053 ADSSL1Q8N142 457 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 B4GALNT2Q8NHY0 566 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 ARL8AQ96BM9 186 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 OSGEPL1Q9H4B0 414 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 YY1AP1Q9H869 796 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 COPS7BQ9H9Q2 264 aaPredicted RBP11.39□□□□□ -0.59
LINC00654-201ENST00000379053 AMACRQ9UHK6 382 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 VPS9D1Q9Y2B5 631 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 MROH7Q68CQ1 1323 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 CNTNAP5Q8WYK1 1306 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 ZNF609O15014 1411 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 LRRIQ3A6PVS8 624 aaPredicted RBP11.39□□□□□ -0.59
LINC00654-201ENST00000379053 STRNO43815 780 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 CLASP2O75122 1294 aaKnown RBP11.39□□□□□ -0.59
LINC00654-201ENST00000379053 ANXA9O76027 345 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 RHOBTB3O94955 611 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 RFX3P48380 749 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 ORC1Q13415 861 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 NFE2Q16621 373 aaPredicted RBP11.39□□□□□ -0.59
LINC00654-201ENST00000379053 SYDE1Q6ZW31 735 aaPredicted RBP11.39□□□□□ -0.59
LINC00654-201ENST00000379053 CHMP1BQ7LBR1 199 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 C1orf131Q8NDD1 294 aaKnown RBP11.39□□□□□ -0.59
LINC00654-201ENST00000379053 UBE2OQ9C0C9 1292 aaKnown RBP11.39□□□□□ -0.59
LINC00654-201ENST00000379053 ACTR5Q9H9F9 607 aaPredicted RBP11.39□□□□□ -0.59
LINC00654-201ENST00000379053 UBXN8O00124 270 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 POMCP01189 267 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 HSPA1AP0DMV8 641 aaKnown RBP11.39□□□□□ -0.59
LINC00654-201ENST00000379053 HSPA1BP0DMV9 641 aaKnown RBP11.39□□□□□ -0.59
LINC00654-201ENST00000379053 GHRP10912 638 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 FGFR4P22455 802 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 SPRP35270 261 aaPredicted RBP11.39□□□□□ -0.59
LINC00654-201ENST00000379053 LRRC14Q15048 493 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 SLC18A3Q16572 532 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 ACSF2Q96CM8 615 aaPredicted RBP11.39□□□□□ -0.59
LINC00654-201ENST00000379053 ADAM33Q9BZ11 813 aa11.39□□□□□ -0.59
LINC00654-201ENST00000379053 CST8O60676 142 aa11.38□□□□□ -0.59
LINC00654-201ENST00000379053 XYLBO75191 536 aa11.38□□□□□ -0.59
LINC00654-201ENST00000379053 RHOCP08134 193 aa11.38□□□□□ -0.59
LINC00654-201ENST00000379053 PBLDP30039 288 aaPredicted RBP11.38□□□□□ -0.59
LINC00654-201ENST00000379053 NUMBP49757 651 aa11.38□□□□□ -0.59
LINC00654-201ENST00000379053 STAT4Q14765 748 aa11.38□□□□□ -0.59
LINC00654-201ENST00000379053 TJAP1Q5JTD0 557 aa11.38□□□□□ -0.59
LINC00654-201ENST00000379053 NUP93Q8N1F7 819 aa11.38□□□□□ -0.59
LINC00654-201ENST00000379053 MKNK1Q9BUB5 465 aa11.38□□□□□ -0.59
LINC00654-201ENST00000379053 MTMR12Q9C0I1 747 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 870.7 ms