RNA–Protein interactions for RNA: ENST00000378821.3

TMEM88B-201, Transcript of transmembrane protein 88B, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM88B, Length 492 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88B-201ENST00000378821 FAM160A1Q05DH4 1040 aa20.33■□□□□ 0.85
TMEM88B-201ENST00000378821 SURF1Q15526 300 aa20.33■□□□□ 0.85
TMEM88B-201ENST00000378821 BMT2Q1RMZ1 405 aa20.33■□□□□ 0.85
TMEM88B-201ENST00000378821 STXBP5Q5T5C0 1151 aa20.33■□□□□ 0.85
TMEM88B-201ENST00000378821 ARID3BQ8IVW6 561 aaPredicted RBP20.33■□□□□ 0.85
TMEM88B-201ENST00000378821 NELFCDQ8IXH7 590 aa20.33■□□□□ 0.85
TMEM88B-201ENST00000378821 CSGALNACT2Q8N6G5 542 aa20.33■□□□□ 0.85
TMEM88B-201ENST00000378821 TMLHEQ9NVH6 421 aa20.33■□□□□ 0.85
TMEM88B-201ENST00000378821 CHADO15335 359 aa20.32■□□□□ 0.84
TMEM88B-201ENST00000378821 GABRR2P28476 465 aa20.32■□□□□ 0.84
TMEM88B-201ENST00000378821 STK4Q13043 487 aa20.32■□□□□ 0.84
TMEM88B-201ENST00000378821 NFE2Q16621 373 aaPredicted RBP20.32■□□□□ 0.84
TMEM88B-201ENST00000378821 MGAT5BQ3V5L5 792 aa20.32■□□□□ 0.84
TMEM88B-201ENST00000378821 TOP6BLQ8N6T0 577 aa20.32■□□□□ 0.84
TMEM88B-201ENST00000378821 NELL1Q92832 810 aa20.32■□□□□ 0.84
TMEM88B-201ENST00000378821 LRRC3BQ96PB8 259 aa20.32■□□□□ 0.84
TMEM88B-201ENST00000378821 SEPT5Q99719 369 aaPredicted RBP20.32■□□□□ 0.84
TMEM88B-201ENST00000378821 LPIN3Q9BQK8 851 aa20.32■□□□□ 0.84
TMEM88B-201ENST00000378821 MTMR12Q9C0I1 747 aa20.32■□□□□ 0.84
TMEM88B-201ENST00000378821 TASP1Q9H6P5 420 aa20.32■□□□□ 0.84
TMEM88B-201ENST00000378821 ABCB6Q9NP58 842 aa20.32■□□□□ 0.84
TMEM88B-201ENST00000378821 HSPBP1Q9NZL4 362 aa20.32■□□□□ 0.84
TMEM88B-201ENST00000378821 ZMYM5Q9UJ78 669 aa20.32■□□□□ 0.84
TMEM88B-201ENST00000378821 PCDHB5Q9Y5E4 795 aa20.32■□□□□ 0.84
TMEM88B-201ENST00000378821 PTPRJQ12913 1337 aa20.31■□□□□ 0.84
TMEM88B-201ENST00000378821 RIF1Q5UIP0 2472 aaKnown RBP20.31■□□□□ 0.84
TMEM88B-201ENST00000378821 KIF26AQ9ULI4 1882 aaPredicted RBP20.31■□□□□ 0.84
TMEM88B-201ENST00000378821 SOBPA7XYQ1 873 aa20.31■□□□□ 0.84
TMEM88B-201ENST00000378821 ZNF263O14978 683 aa20.31■□□□□ 0.84
TMEM88B-201ENST00000378821 HUS1O60921 280 aa20.31■□□□□ 0.84
TMEM88B-201ENST00000378821 HMGA1P17096 107 aaKnown RBP20.31■□□□□ 0.84
TMEM88B-201ENST00000378821 VEPH1Q14D04 833 aa20.31■□□□□ 0.84
TMEM88B-201ENST00000378821 DPH6Q7L8W6 267 aa20.31■□□□□ 0.84
TMEM88B-201ENST00000378821 TMEM150AQ86TG1 271 aa20.31■□□□□ 0.84
TMEM88B-201ENST00000378821 CBWD2Q8IUF1 395 aa20.31■□□□□ 0.84
TMEM88B-201ENST00000378821 FAM84AQ96KN4 292 aa20.31■□□□□ 0.84
TMEM88B-201ENST00000378821 ATXN3LQ9H3M9 355 aa20.31■□□□□ 0.84
TMEM88B-201ENST00000378821 SLITRK6Q9H5Y7 841 aa20.31■□□□□ 0.84
TMEM88B-201ENST00000378821 OBSL1O75147 1896 aa20.3■□□□□ 0.84
TMEM88B-201ENST00000378821 FAM186AA6NE01 2351 aa20.3■□□□□ 0.84
TMEM88B-201ENST00000378821 F5P12259 2224 aa20.3■□□□□ 0.84
TMEM88B-201ENST00000378821 CDC25CP30307 473 aa20.3■□□□□ 0.84
TMEM88B-201ENST00000378821 LHX1P48742 406 aa20.3■□□□□ 0.84
TMEM88B-201ENST00000378821 TSPY1Q01534 308 aa20.3■□□□□ 0.84
TMEM88B-201ENST00000378821 PSMD2Q13200 908 aa20.3■□□□□ 0.84
TMEM88B-201ENST00000378821 PNOCQ13519 176 aa20.3■□□□□ 0.84
TMEM88B-201ENST00000378821 DUOXA2Q1HG44 320 aa20.3■□□□□ 0.84
TMEM88B-201ENST00000378821 SOWAHAQ2M3V2 549 aa20.3■□□□□ 0.84
TMEM88B-201ENST00000378821 INTS6LQ5JSJ4 861 aaKnown RBP20.3■□□□□ 0.84
TMEM88B-201ENST00000378821 GPR158Q5T848 1215 aa20.3■□□□□ 0.84
TMEM88B-201ENST00000378821 ZC3H14Q6PJT7 736 aaKnown RBP20.3■□□□□ 0.84
TMEM88B-201ENST00000378821 WDR49Q8IV35 697 aa20.3■□□□□ 0.84
TMEM88B-201ENST00000378821 OR5B17Q8NGF7 314 aa20.3■□□□□ 0.84
TMEM88B-201ENST00000378821 MSANTD3Q96H12 275 aa20.3■□□□□ 0.84
TMEM88B-201ENST00000378821 AGPAT3Q9NRZ7 376 aa20.3■□□□□ 0.84
TMEM88B-201ENST00000378821 SPATA6Q9NWH7 488 aaPredicted RBP20.3■□□□□ 0.84
TMEM88B-201ENST00000378821 DDX43Q9NXZ2 648 aaKnown RBP20.3■□□□□ 0.84
TMEM88B-201ENST00000378821 ABI2Q9NYB9 513 aaPredicted RBP20.3■□□□□ 0.84
TMEM88B-201ENST00000378821 WDR87Q6ZQQ6 2873 aa20.3■□□□□ 0.84
TMEM88B-201ENST00000378821 ZNF292O60281 2723 aa20.29■□□□□ 0.84
TMEM88B-201ENST00000378821 RHOBTB3O94955 611 aa20.29■□□□□ 0.84
TMEM88B-201ENST00000378821 F11P03951 625 aa20.29■□□□□ 0.84
TMEM88B-201ENST00000378821 TMEM191BP0C7N4 346 aa20.29■□□□□ 0.84
TMEM88B-201ENST00000378821 BFSP1Q12934 665 aa20.29■□□□□ 0.84
TMEM88B-201ENST00000378821 ARHGAP15Q53QZ3 475 aa20.29■□□□□ 0.84
TMEM88B-201ENST00000378821 FAM171BQ6P995 826 aa20.29■□□□□ 0.84
TMEM88B-201ENST00000378821 C1orf228Q6PIY5 440 aa20.29■□□□□ 0.84
TMEM88B-201ENST00000378821 OSTM1Q86WC4 334 aa20.29■□□□□ 0.84
TMEM88B-201ENST00000378821 C12orf56Q8IXR9 622 aa20.29■□□□□ 0.84
TMEM88B-201ENST00000378821 NOC3LQ8WTT2 800 aaKnown RBP20.29■□□□□ 0.84
TMEM88B-201ENST00000378821 CCDC34Q96HJ3 373 aa20.29■□□□□ 0.84
TMEM88B-201ENST00000378821 ANKRD36BP1Q96IX9 119 aa20.29■□□□□ 0.84
TMEM88B-201ENST00000378821 IPO9Q96P70 1041 aaKnown RBP20.29■□□□□ 0.84
TMEM88B-201ENST00000378821 IER2Q9BTL4 223 aa20.29■□□□□ 0.84
TMEM88B-201ENST00000378821 SLC46A2Q9BY10 475 aa20.29■□□□□ 0.84
TMEM88B-201ENST00000378821 CHRDQ9H2X0 955 aa20.29■□□□□ 0.84
TMEM88B-201ENST00000378821 PRMT8Q9NR22 394 aaPredicted RBP20.29■□□□□ 0.84
TMEM88B-201ENST00000378821 CGNQ9P2M7 1197 aaKnown RBP20.29■□□□□ 0.84
TMEM88B-201ENST00000378821 SNX9Q9Y5X1 595 aa20.29■□□□□ 0.84
TMEM88B-201ENST00000378821 PIAS3Q9Y6X2 628 aa20.29■□□□□ 0.84
TMEM88B-201ENST00000378821 R4GN57 208 aa20.29■□□□□ 0.84
TMEM88B-201ENST00000378821 LAMTOR5O43504 91 aa20.28■□□□□ 0.84
TMEM88B-201ENST00000378821 LMNAP02545 664 aaKnown RBP20.28■□□□□ 0.84
TMEM88B-201ENST00000378821 NLRP12P59046 1061 aa20.28■□□□□ 0.84
TMEM88B-201ENST00000378821 MYL7Q01449 175 aa20.28■□□□□ 0.84
TMEM88B-201ENST00000378821 MYO1EQ12965 1108 aa20.28■□□□□ 0.84
TMEM88B-201ENST00000378821 KCNB1Q14721 858 aa20.28■□□□□ 0.84
TMEM88B-201ENST00000378821 SNRNP35Q16560 246 aaKnown RBP20.28■□□□□ 0.84
TMEM88B-201ENST00000378821 KNOP1Q1ED39 458 aaKnown RBP20.28■□□□□ 0.84
TMEM88B-201ENST00000378821 CFAP221Q4G0U5 840 aa20.28■□□□□ 0.84
TMEM88B-201ENST00000378821 ADSSL1Q8N142 457 aa20.28■□□□□ 0.84
TMEM88B-201ENST00000378821 FAM200AQ8TCP9 573 aa20.28■□□□□ 0.84
TMEM88B-201ENST00000378821 GIPC2Q8TF65 315 aa20.28■□□□□ 0.84
TMEM88B-201ENST00000378821 TMEM174Q8WUU8 243 aa20.28■□□□□ 0.84
TMEM88B-201ENST00000378821 FAM3CQ92520 227 aa20.28■□□□□ 0.84
TMEM88B-201ENST00000378821 CCDC47Q96A33 483 aaKnown RBP20.28■□□□□ 0.84
TMEM88B-201ENST00000378821 HPDLQ96IR7 371 aa20.28■□□□□ 0.84
TMEM88B-201ENST00000378821 MYRFLQ96LU7 910 aa20.28■□□□□ 0.84
TMEM88B-201ENST00000378821 TIGD1Q96MW7 591 aa20.28■□□□□ 0.84
TMEM88B-201ENST00000378821 PTPRZ1P23471 2315 aaPredicted RBP20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms