RNA–Protein interactions for RNA: ENST00000378727.8

THUMPD2-201, Transcript of THUMP domain containing 2, humanhuman

TSL 1 (best)

Gene THUMPD2, Length 2,089 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD2-201ENST00000378727 DPEP3Q9H4B8 488 aa18.37■□□□□ 0.53
THUMPD2-201ENST00000378727 ARFGAP3Q9NP61 516 aa18.37■□□□□ 0.53
THUMPD2-201ENST00000378727 STARD7Q9NQZ5 370 aa18.37■□□□□ 0.53
THUMPD2-201ENST00000378727 L1RE1Q9UN81 338 aa18.37■□□□□ 0.53
THUMPD2-201ENST00000378727 RWDD2BP57060 319 aa18.37■□□□□ 0.53
THUMPD2-201ENST00000378727 PDCLQ13371 301 aa18.37■□□□□ 0.53
THUMPD2-201ENST00000378727 BEND6Q5SZJ8 279 aaPredicted RBP18.37■□□□□ 0.53
THUMPD2-201ENST00000378727 PPP1R26Q5T8A7 1209 aaPredicted RBP18.37■□□□□ 0.53
THUMPD2-201ENST00000378727 LPIN3Q9BQK8 851 aa18.37■□□□□ 0.53
THUMPD2-201ENST00000378727 XRN2Q9H0D6 950 aaKnown RBP eCLIP18.37■□□□□ 0.53
THUMPD2-201ENST00000378727 STRIP2Q9ULQ0 834 aa18.37■□□□□ 0.53
THUMPD2-201ENST00000378727 PHF24Q9UPV7 400 aa18.37■□□□□ 0.53
THUMPD2-201ENST00000378727 GIT1Q9Y2X7 761 aa18.37■□□□□ 0.53
THUMPD2-201ENST00000378727 CCDC188H7C350 402 aa18.36■□□□□ 0.53
THUMPD2-201ENST00000378727 CAND2O75155 1236 aa18.36■□□□□ 0.53
THUMPD2-201ENST00000378727 MYBL2P10244 700 aa18.36■□□□□ 0.53
THUMPD2-201ENST00000378727 LMO2P25791 158 aa18.36■□□□□ 0.53
THUMPD2-201ENST00000378727 GSCP56915 257 aaPredicted RBP18.36■□□□□ 0.53
THUMPD2-201ENST00000378727 TAS2R40P59535 323 aa18.36■□□□□ 0.53
THUMPD2-201ENST00000378727 MBTPS1Q14703 1052 aa18.36■□□□□ 0.53
THUMPD2-201ENST00000378727 ADAT2Q7Z6V5 191 aaKnown RBP18.36■□□□□ 0.53
THUMPD2-201ENST00000378727 XYLT1Q86Y38 959 aa18.36■□□□□ 0.53
THUMPD2-201ENST00000378727 C18orf8Q96DM3 657 aa18.36■□□□□ 0.53
THUMPD2-201ENST00000378727 ADAM2Q99965 735 aa18.36■□□□□ 0.53
THUMPD2-201ENST00000378727 DDX47Q9H0S4 455 aaKnown RBP18.36■□□□□ 0.53
THUMPD2-201ENST00000378727 TSPYL2Q9H2G4 693 aaPredicted RBP18.36■□□□□ 0.53
THUMPD2-201ENST00000378727 SLC38A7Q9NVC3 462 aa18.36■□□□□ 0.53
THUMPD2-201ENST00000378727 STIM2Q9P246 746 aa18.36■□□□□ 0.53
THUMPD2-201ENST00000378727 IP6K2Q9UHH9 426 aa18.36■□□□□ 0.53
THUMPD2-201ENST00000378727 SQORQ9Y6N5 450 aa18.36■□□□□ 0.53
THUMPD2-201ENST00000378727 A0A0U1RQF3 1178 aa18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 A0A0U1RQG5 324 aaPredicted RBP18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 A8MXQ7 604 aa18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 RAD51CO43502 376 aa18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 THP07101 528 aa18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 GLI1P08151 1106 aa18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 MAN1A1P33908 653 aa18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 GABRB2P47870 512 aa18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 RAB27AP51159 221 aa18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 SCNN1GP51170 649 aa18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 GOLGA7BQ2TAP0 167 aa18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 PKDCCQ504Y2 493 aa18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 ZDHHC14Q8IZN3 488 aa18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 APPL2Q8NEU8 664 aa18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 GADD45GIP1Q8TAE8 222 aaPredicted RBP18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 DDX27Q96GQ7 796 aaKnown RBP18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 UNC93B1Q9H1C4 597 aa18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 FAM49BQ9NUQ9 324 aa18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 GOLGA8SH3BPF8 625 aa18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 SART1O43290 800 aaKnown RBP18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 ERLIN1O75477 346 aa18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 MCM3P25205 808 aa18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 GNL1P36915 607 aaPredicted RBP18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 PSMC1P62191 440 aaKnown RBP18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 TAP1Q03518 808 aa18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 STILQ15468 1287 aa18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 DCUN1D2Q6PH85 259 aa18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 CCNI2Q6ZMN8 369 aaPredicted RBP18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 TTC30AQ86WT1 665 aa18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 RUBCNQ92622 972 aa18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 NAP1L3Q99457 506 aaPredicted RBP18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 PLEKHA4Q9H4M7 779 aa18.35■□□□□ 0.53
THUMPD2-201ENST00000378727 SIGLEC16A6NMB1 481 aa18.34■□□□□ 0.53
THUMPD2-201ENST00000378727 ARVCFO00192 962 aa18.34■□□□□ 0.53
THUMPD2-201ENST00000378727 PDGFRBP09619 1106 aa18.34■□□□□ 0.53
THUMPD2-201ENST00000378727 SEL1L2Q5TEA6 688 aa18.34■□□□□ 0.53
THUMPD2-201ENST00000378727 CRYBG2Q8N1P7 616 aa18.34■□□□□ 0.53
THUMPD2-201ENST00000378727 JOSD2Q8TAC2 188 aa18.34■□□□□ 0.53
THUMPD2-201ENST00000378727 USTQ9Y2C2 406 aa18.34■□□□□ 0.53
THUMPD2-201ENST00000378727 ZSCAN5CA6NGD5 496 aaPredicted RBP18.34■□□□□ 0.53
THUMPD2-201ENST00000378727 TCF4P15884 667 aa18.34■□□□□ 0.53
THUMPD2-201ENST00000378727 RFC1P35251 1148 aaPredicted RBP18.34■□□□□ 0.53
THUMPD2-201ENST00000378727 CLCNKBP51801 687 aa18.34■□□□□ 0.53
THUMPD2-201ENST00000378727 ZNF268Q14587 947 aaPredicted RBP18.34■□□□□ 0.53
THUMPD2-201ENST00000378727 CLUL1Q15846 466 aa18.34■□□□□ 0.53
THUMPD2-201ENST00000378727 OSTM1Q86WC4 334 aa18.34■□□□□ 0.53
THUMPD2-201ENST00000378727 GSPT2Q8IYD1 628 aaKnown RBP18.34■□□□□ 0.53
THUMPD2-201ENST00000378727 ADGRF2Q8IZF7 708 aa18.34■□□□□ 0.53
THUMPD2-201ENST00000378727 TOP6BLQ8N6T0 577 aa18.34■□□□□ 0.53
THUMPD2-201ENST00000378727 RNF169Q8NCN4 708 aa18.34■□□□□ 0.53
THUMPD2-201ENST00000378727 MCRS1Q96EZ8 462 aa18.34■□□□□ 0.53
THUMPD2-201ENST00000378727 SYNCQ9H7C4 482 aa18.34■□□□□ 0.53
THUMPD2-201ENST00000378727 WDR35Q9P2L0 1181 aa18.34■□□□□ 0.53
THUMPD2-201ENST00000378727 TCRBV7S2A1N4TA0A589 114 aa18.33■□□□□ 0.52
THUMPD2-201ENST00000378727 F8VP50 259 aa18.33■□□□□ 0.52
THUMPD2-201ENST00000378727 TULP2O00295 520 aa18.33■□□□□ 0.52
THUMPD2-201ENST00000378727 HUS1O60921 280 aa18.33■□□□□ 0.52
THUMPD2-201ENST00000378727 SASH3O75995 380 aa18.33■□□□□ 0.52
THUMPD2-201ENST00000378727 HEXIM1O94992 359 aaKnown RBP18.33■□□□□ 0.52
THUMPD2-201ENST00000378727 KRT3P12035 628 aa18.33■□□□□ 0.52
THUMPD2-201ENST00000378727 ARHGAP17Q68EM7 881 aa18.33■□□□□ 0.52
THUMPD2-201ENST00000378727 SLC13A5Q86YT5 568 aaPredicted RBP18.33■□□□□ 0.52
THUMPD2-201ENST00000378727 C3orf58Q8NDZ4 430 aa18.33■□□□□ 0.52
THUMPD2-201ENST00000378727 FUT8Q9BYC5 575 aa18.33■□□□□ 0.52
THUMPD2-201ENST00000378727 SNX25Q9H3E2 840 aa18.33■□□□□ 0.52
THUMPD2-201ENST00000378727 RSAD1Q9HA92 442 aa18.33■□□□□ 0.52
THUMPD2-201ENST00000378727 TDRD15B5MCY1 1934 aaKnown RBP18.33■□□□□ 0.52
THUMPD2-201ENST00000378727 KBTBD13C9JR72 458 aa18.32■□□□□ 0.52
THUMPD2-201ENST00000378727 PODXLO00592 558 aa18.32■□□□□ 0.52
THUMPD2-201ENST00000378727 CYB561D2O14569 222 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms