RNA–Protein interactions for RNA: ENST00000377342.9

CBWD3-202, Transcript of COBW domain containing 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CBWD3, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-202ENST00000377342 PCDHGC5Q9Y5F6 944 aa22.67■■□□□ 1.22
CBWD3-202ENST00000377342 BACE2Q9Y5Z0 518 aa22.67■■□□□ 1.22
CBWD3-202ENST00000377342 MYBPHLA2RUH7 354 aa22.66■■□□□ 1.22
CBWD3-202ENST00000377342 FSCN2O14926 492 aa22.66■■□□□ 1.22
CBWD3-202ENST00000377342 BRD2P25440 801 aaKnown RBP22.66■■□□□ 1.22
CBWD3-202ENST00000377342 GNA15P30679 374 aa22.66■■□□□ 1.22
CBWD3-202ENST00000377342 CCDC173Q0VFZ6 552 aa22.66■■□□□ 1.22
CBWD3-202ENST00000377342 LRRTM3Q86VH5 581 aa22.66■■□□□ 1.22
CBWD3-202ENST00000377342 GPR65Q8IYL9 337 aa22.66■■□□□ 1.22
CBWD3-202ENST00000377342 SLC20A1Q8WUM9 679 aa22.66■■□□□ 1.22
CBWD3-202ENST00000377342 DDX1Q92499 740 aaKnown RBP22.66■■□□□ 1.22
CBWD3-202ENST00000377342 TNIP3Q96KP6 325 aa22.66■■□□□ 1.22
CBWD3-202ENST00000377342 PANX2Q96RD6 677 aa22.66■■□□□ 1.22
CBWD3-202ENST00000377342 ZCWPW1Q9H0M4 648 aa22.66■■□□□ 1.22
CBWD3-202ENST00000377342 FAM49BQ9NUQ9 324 aa22.66■■□□□ 1.22
CBWD3-202ENST00000377342 TMLHEQ9NVH6 421 aa22.66■■□□□ 1.22
CBWD3-202ENST00000377342 PUF60Q9UHX1 559 aaKnown RBP22.66■■□□□ 1.22
CBWD3-202ENST00000377342 PATJQ8NI35 1801 aa22.66■■□□□ 1.22
CBWD3-202ENST00000377342 OR6C75A6NL08 312 aa22.65■■□□□ 1.22
CBWD3-202ENST00000377342 H7C4K7 107 aa22.65■■□□□ 1.22
CBWD3-202ENST00000377342 CSPG5O95196 566 aa22.65■■□□□ 1.22
CBWD3-202ENST00000377342 PTPN1P18031 435 aaKnown RBP22.65■■□□□ 1.22
CBWD3-202ENST00000377342 FECHP22830 423 aa22.65■■□□□ 1.22
CBWD3-202ENST00000377342 IRS1P35568 1242 aa22.65■■□□□ 1.22
CBWD3-202ENST00000377342 FAM171BQ6P995 826 aa22.65■■□□□ 1.22
CBWD3-202ENST00000377342 CLSTN3Q9BQT9 956 aa22.65■■□□□ 1.22
CBWD3-202ENST00000377342 MRPL17Q9NRX2 175 aaKnown RBP22.65■■□□□ 1.22
CBWD3-202ENST00000377342 CDY1Q9Y6F8 540 aa22.65■■□□□ 1.22
CBWD3-202ENST00000377342 GOLGA6L6A8MZA4 724 aa22.65■■□□□ 1.22
CBWD3-202ENST00000377342 PLEKP08567 350 aaPredicted RBP22.65■■□□□ 1.22
CBWD3-202ENST00000377342 SKILP12757 684 aa22.65■■□□□ 1.22
CBWD3-202ENST00000377342 CCDC130P13994 396 aa22.65■■□□□ 1.22
CBWD3-202ENST00000377342 CD19P15391 556 aa22.65■■□□□ 1.22
CBWD3-202ENST00000377342 PDE6CP51160 858 aa22.65■■□□□ 1.22
CBWD3-202ENST00000377342 CDR1P51861 262 aa22.65■■□□□ 1.22
CBWD3-202ENST00000377342 GSDMDP57764 484 aa22.65■■□□□ 1.22
CBWD3-202ENST00000377342 PTK2Q05397 1052 aa22.65■■□□□ 1.22
CBWD3-202ENST00000377342 MDH1BQ5I0G3 518 aa22.65■■□□□ 1.22
CBWD3-202ENST00000377342 SLC8B1Q6J4K2 584 aa22.65■■□□□ 1.22
CBWD3-202ENST00000377342 TMEM139Q8IV31 216 aa22.65■■□□□ 1.22
CBWD3-202ENST00000377342 FMNL3Q8IVF7 1028 aa22.65■■□□□ 1.22
CBWD3-202ENST00000377342 HEXIM2Q96MH2 286 aaKnown RBP22.65■■□□□ 1.22
CBWD3-202ENST00000377342 ARHGAP20Q9P2F6 1191 aa22.65■■□□□ 1.22
CBWD3-202ENST00000377342 GTF3C4Q9UKN8 822 aa22.65■■□□□ 1.22
CBWD3-202ENST00000377342 O00370 1275 aa22.64■■□□□ 1.21
CBWD3-202ENST00000377342 SOX1O00570 391 aaPredicted RBP22.64■■□□□ 1.21
CBWD3-202ENST00000377342 CFHP08603 1231 aa22.64■■□□□ 1.21
CBWD3-202ENST00000377342 CHRNB2P17787 502 aa22.64■■□□□ 1.21
CBWD3-202ENST00000377342 TSPY1Q01534 308 aa22.64■■□□□ 1.21
CBWD3-202ENST00000377342 TMC7Q7Z402 723 aa22.64■■□□□ 1.21
CBWD3-202ENST00000377342 MYCBPAPQ8TBZ2 947 aa22.64■■□□□ 1.21
CBWD3-202ENST00000377342 MYLPFQ96A32 169 aa22.64■■□□□ 1.21
CBWD3-202ENST00000377342 PCED1BQ96HM7 432 aa22.64■■□□□ 1.21
CBWD3-202ENST00000377342 HAUS4Q9H6D7 363 aa22.64■■□□□ 1.21
CBWD3-202ENST00000377342 RXFP1Q9HBX9 757 aa22.64■■□□□ 1.21
CBWD3-202ENST00000377342 ENTPD7Q9NQZ7 604 aa22.64■■□□□ 1.21
CBWD3-202ENST00000377342 IRAK3Q9Y616 596 aa22.64■■□□□ 1.21
CBWD3-202ENST00000377342 THAP12O43422 761 aa22.63■■□□□ 1.21
CBWD3-202ENST00000377342 LPXNO60711 386 aa22.63■■□□□ 1.21
CBWD3-202ENST00000377342 VNN2O95498 520 aa22.63■■□□□ 1.21
CBWD3-202ENST00000377342 VDRP11473 427 aa22.63■■□□□ 1.21
CBWD3-202ENST00000377342 BPIFB4P59827 614 aa22.63■■□□□ 1.21
CBWD3-202ENST00000377342 ROR1Q01973 937 aa22.63■■□□□ 1.21
CBWD3-202ENST00000377342 SGO2Q562F6 1265 aa22.63■■□□□ 1.21
CBWD3-202ENST00000377342 PPP1R26Q5T8A7 1209 aaPredicted RBP22.63■■□□□ 1.21
CBWD3-202ENST00000377342 PLPP4Q5VZY2 271 aa22.63■■□□□ 1.21
CBWD3-202ENST00000377342 FUKQ8N0W3 1084 aa22.63■■□□□ 1.21
CBWD3-202ENST00000377342 OXCT2Q9BYC2 517 aaPredicted RBP22.63■■□□□ 1.21
CBWD3-202ENST00000377342 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP22.62■■□□□ 1.21
CBWD3-202ENST00000377342 WDR27A2RRH5 827 aa22.62■■□□□ 1.21
CBWD3-202ENST00000377342 HIDE1A8MVS5 230 aa22.62■■□□□ 1.21
CBWD3-202ENST00000377342 TEX28O15482 410 aa22.62■■□□□ 1.21
CBWD3-202ENST00000377342 SERPING1P05155 500 aa22.62■■□□□ 1.21
CBWD3-202ENST00000377342 SSTR3P32745 418 aaPredicted RBP22.62■■□□□ 1.21
CBWD3-202ENST00000377342 KLHL30Q0D2K2 578 aa22.62■■□□□ 1.21
CBWD3-202ENST00000377342 SLC39A12Q504Y0 691 aa22.62■■□□□ 1.21
CBWD3-202ENST00000377342 TAF3Q5VWG9 929 aa22.62■■□□□ 1.21
CBWD3-202ENST00000377342 ARHGAP17Q68EM7 881 aa22.62■■□□□ 1.21
CBWD3-202ENST00000377342 PAQR9Q6ZVX9 377 aa22.62■■□□□ 1.21
CBWD3-202ENST00000377342 ZNF571Q7Z3V5 609 aaPredicted RBP22.62■■□□□ 1.21
CBWD3-202ENST00000377342 ZNF606Q8WXB4 792 aa22.62■■□□□ 1.21
CBWD3-202ENST00000377342 CHP1Q99653 195 aa22.62■■□□□ 1.21
CBWD3-202ENST00000377342 B3GNT5Q9BYG0 378 aa22.62■■□□□ 1.21
CBWD3-202ENST00000377342 ZNF576Q9H609 170 aa22.62■■□□□ 1.21
CBWD3-202ENST00000377342 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP22.62■■□□□ 1.21
CBWD3-202ENST00000377342 FNIP2Q9P278 1114 aa22.62■■□□□ 1.21
CBWD3-202ENST00000377342 WDR3Q9UNX4 943 aaKnown RBP eCLIP22.62■■□□□ 1.21
CBWD3-202ENST00000377342 C2orf71A6NGG8 1288 aa22.62■■□□□ 1.21
CBWD3-202ENST00000377342 RFXAPO00287 272 aa22.62■■□□□ 1.21
CBWD3-202ENST00000377342 CNPP09543 421 aaKnown RBP22.62■■□□□ 1.21
CBWD3-202ENST00000377342 CPB1P15086 417 aa22.62■■□□□ 1.21
CBWD3-202ENST00000377342 OR1D2P34982 312 aa22.62■■□□□ 1.21
CBWD3-202ENST00000377342 FMO1Q01740 532 aa22.62■■□□□ 1.21
CBWD3-202ENST00000377342 SMC1AQ14683 1233 aaKnown RBP22.62■■□□□ 1.21
CBWD3-202ENST00000377342 TDRD12Q587J7 1177 aaKnown RBP22.62■■□□□ 1.21
CBWD3-202ENST00000377342 PALB2Q86YC2 1186 aa22.62■■□□□ 1.21
CBWD3-202ENST00000377342 GLYCTKQ8IVS8 523 aa22.62■■□□□ 1.21
CBWD3-202ENST00000377342 SLC2A14Q8TDB8 520 aa22.62■■□□□ 1.21
CBWD3-202ENST00000377342 RHOBTB2Q9BYZ6 727 aa22.62■■□□□ 1.21
CBWD3-202ENST00000377342 TTYH1Q9H313 450 aaPredicted RBP22.62■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms