RNA–Protein interactions for RNA: ENST00000376839.7

ACTN1-202, Transcript of actinin alpha 1, humanhuman

TSL 2 BASIC

Gene ACTN1, Length 2,824 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-202ENST00000376839 PEX11AO75192 247 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 DCTN3O75935 186 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 ITGBL1O95965 494 aaPredicted RBP13.91□□□□□ -0.18
ACTN1-202ENST00000376839 PIGRP01833 764 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 SUPT20HL2P0C7V6 817 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 CTCFP49711 727 aaPredicted RBP13.91□□□□□ -0.18
ACTN1-202ENST00000376839 SUPT20HL1Q3ZLR7 823 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 PPP1R15BQ5SWA1 713 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 AGGF1Q8N302 714 aaeCLIP13.91□□□□□ -0.18
ACTN1-202ENST00000376839 WDTC1Q8N5D0 677 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 SLC35B2Q8TB61 432 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 KLF6Q99612 283 aaPredicted RBP13.91□□□□□ -0.18
ACTN1-202ENST00000376839 PORCNQ9H237 461 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 NPHS2Q9NP85 383 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 ZMYND8Q9ULU4 1186 aaPredicted RBP13.91□□□□□ -0.18
ACTN1-202ENST00000376839 C3orf70A6NLC5 250 aaPredicted RBP13.91□□□□□ -0.18
ACTN1-202ENST00000376839 GOLGA8RI6L899 631 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 ATP5HO75947 161 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 CALB1P05937 261 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 HSPA1LP34931 641 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 GEMIN4P57678 1058 aaKnown RBP13.91□□□□□ -0.18
ACTN1-202ENST00000376839 TAF1BQ53T94 588 aaPredicted RBP13.91□□□□□ -0.18
ACTN1-202ENST00000376839 GPAT2Q6NUI2 795 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 LONP2Q86WA8 852 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 CCDC125Q86Z20 511 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 NSUN6Q8TEA1 469 aaKnown RBP13.91□□□□□ -0.18
ACTN1-202ENST00000376839 TFAP2BQ92481 460 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 CPT1BQ92523 772 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 ZNRF3Q9ULT6 936 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 TCRBV7S3A2A0A539 114 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 ALDH3A1P30838 453 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 PTPN7P35236 360 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 MYL6P60660 151 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 OTUD4Q01804 1114 aaKnown RBP13.91□□□□□ -0.18
ACTN1-202ENST00000376839 KCNT1Q5JUK3 1230 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 SLFN12LQ6IEE8 588 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 ACTL9Q8TC94 416 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 FAXDC2Q96IV6 333 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 MTMR12Q9C0I1 747 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 ZWILCHQ9H900 591 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 RNPEPL1Q9HAU8 725 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 TJP2Q9UDY2 1190 aa13.91□□□□□ -0.18
ACTN1-202ENST00000376839 ATP2A1O14983 1001 aa13.9□□□□□ -0.18
ACTN1-202ENST00000376839 ASS1P00966 412 aaKnown RBP13.9□□□□□ -0.18
ACTN1-202ENST00000376839 GNAZP19086 355 aa13.9□□□□□ -0.18
ACTN1-202ENST00000376839 IL1R2P27930 398 aa13.9□□□□□ -0.18
ACTN1-202ENST00000376839 NAMPTP43490 491 aa13.9□□□□□ -0.18
ACTN1-202ENST00000376839 TGFB2P61812 414 aa13.9□□□□□ -0.18
ACTN1-202ENST00000376839 OVGP1Q12889 678 aa13.9□□□□□ -0.18
ACTN1-202ENST00000376839 SCARA5Q6ZMJ2 495 aa13.9□□□□□ -0.18
ACTN1-202ENST00000376839 NLRP9Q7RTR0 991 aa13.9□□□□□ -0.18
ACTN1-202ENST00000376839 RHPN2Q8IUC4 686 aa13.9□□□□□ -0.18
ACTN1-202ENST00000376839 REPS2Q8NFH8 660 aa13.9□□□□□ -0.18
ACTN1-202ENST00000376839 PYROXD1Q8WU10 500 aa13.9□□□□□ -0.18
ACTN1-202ENST00000376839 INPP5DQ92835 1189 aa13.9□□□□□ -0.18
ACTN1-202ENST00000376839 PAFAH2Q99487 392 aa13.9□□□□□ -0.18
ACTN1-202ENST00000376839 DHX33Q9H6R0 707 aaKnown RBP13.9□□□□□ -0.18
ACTN1-202ENST00000376839 CISHQ9NSE2 258 aa13.9□□□□□ -0.18
ACTN1-202ENST00000376839 KANSL3Q9P2N6 904 aa13.9□□□□□ -0.18
ACTN1-202ENST00000376839 ARL2P36404 184 aa13.9□□□□□ -0.18
ACTN1-202ENST00000376839 CCNG1P51959 295 aa13.9□□□□□ -0.18
ACTN1-202ENST00000376839 FAM182AQ5T1J6 154 aa13.9□□□□□ -0.18
ACTN1-202ENST00000376839 PPP1R2P3Q6NXS1 205 aa13.9□□□□□ -0.18
ACTN1-202ENST00000376839 ZNF276Q8N554 614 aa13.9□□□□□ -0.18
ACTN1-202ENST00000376839 ARFGAP1Q8N6T3 406 aa13.9□□□□□ -0.18
ACTN1-202ENST00000376839 TMEM35BQ8NCS4 154 aa13.9□□□□□ -0.18
ACTN1-202ENST00000376839 AGBL3Q8NEM8 1001 aa13.9□□□□□ -0.18
ACTN1-202ENST00000376839 RFWD2Q8NHY2 731 aa13.9□□□□□ -0.18
ACTN1-202ENST00000376839 MZB1Q8WU39 189 aa13.9□□□□□ -0.18
ACTN1-202ENST00000376839 IMPG2Q9BZV3 1241 aa13.9□□□□□ -0.18
ACTN1-202ENST00000376839 ALG13Q9NP73 1137 aaKnown RBP13.9□□□□□ -0.18
ACTN1-202ENST00000376839 MYOZ2Q9NPC6 264 aa13.9□□□□□ -0.18
ACTN1-202ENST00000376839 SLC17A7Q9P2U7 560 aa13.9□□□□□ -0.18
ACTN1-202ENST00000376839 DCTN4Q9UJW0 460 aa13.9□□□□□ -0.18
ACTN1-202ENST00000376839 SNCAIPQ9Y6H5 919 aa13.9□□□□□ -0.18
ACTN1-202ENST00000376839 COL11A1P12107 1806 aaPredicted RBP13.9□□□□□ -0.18
ACTN1-202ENST00000376839 EIF4E1BA6NMX2 242 aaKnown RBP13.89□□□□□ -0.19
ACTN1-202ENST00000376839 TMEM63AO94886 807 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 LDHAP00338 332 aaKnown RBP13.89□□□□□ -0.19
ACTN1-202ENST00000376839 OATP04181 439 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 CD48P09326 243 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 WEE2P0C1S8 567 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 ABL2P42684 1182 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 NRLP54845 237 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 CXCL9Q07325 125 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 PIGHQ14442 188 aaPredicted RBP13.89□□□□□ -0.19
ACTN1-202ENST00000376839 RASA2Q15283 850 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 C3orf62Q6ZUJ4 267 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 ZBTB33Q86T24 672 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 MTDHQ86UE4 582 aaKnown RBP13.89□□□□□ -0.19
ACTN1-202ENST00000376839 NAT8LQ8N9F0 302 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 JOSD2Q8TAC2 188 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 TTC8Q8TAM2 541 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 TCP10LQ8TDR4 215 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 BATF3Q9NR55 127 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 DDX56Q9NY93 547 aaKnown RBP13.89□□□□□ -0.19
ACTN1-202ENST00000376839 ZFP69BQ9UJL9 534 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 AGTPBP1Q9UPW5 1226 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 SPATA31C2B4DYI2 1134 aa13.89□□□□□ -0.19
ACTN1-202ENST00000376839 CST8O60676 142 aa13.89□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms