RNA–Protein interactions for RNA: ENST00000376545.7

ABCF1-202, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ABCF1, Length 3,131 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-202ENST00000376545 NIF3L1Q9GZT8 377 aa11.24□□□□□ -0.61
ABCF1-202ENST00000376545 XYLT2Q9H1B5 865 aa11.24□□□□□ -0.61
ABCF1-202ENST00000376545 CPSF3Q9UKF6 684 aaKnown RBP11.24□□□□□ -0.61
ABCF1-202ENST00000376545 PHTF1Q9UMS5 762 aa11.24□□□□□ -0.61
ABCF1-202ENST00000376545 DYNC1LI1Q9Y6G9 523 aaKnown RBP11.24□□□□□ -0.61
ABCF1-202ENST00000376545 CLUHO75153 1309 aa11.24□□□□□ -0.61
ABCF1-202ENST00000376545 PTPRFP10586 1907 aa11.24□□□□□ -0.61
ABCF1-202ENST00000376545 SPDYE16A6NNV3 312 aaPredicted RBP11.24□□□□□ -0.61
ABCF1-202ENST00000376545 TOM1L1O75674 476 aa11.24□□□□□ -0.61
ABCF1-202ENST00000376545 ATP5HO75947 161 aa11.24□□□□□ -0.61
ABCF1-202ENST00000376545 FARP2O94887 1054 aaPredicted RBP11.24□□□□□ -0.61
ABCF1-202ENST00000376545 ATF7P17544 494 aaPredicted RBP11.24□□□□□ -0.61
ABCF1-202ENST00000376545 PROZP22891 400 aa11.24□□□□□ -0.61
ABCF1-202ENST00000376545 EDNRBP24530 442 aa11.24□□□□□ -0.61
ABCF1-202ENST00000376545 GJC1P36383 396 aa11.24□□□□□ -0.61
ABCF1-202ENST00000376545 MSH2P43246 934 aa11.24□□□□□ -0.61
ABCF1-202ENST00000376545 ASPAP45381 313 aa11.24□□□□□ -0.61
ABCF1-202ENST00000376545 CCNG1P51959 295 aa11.24□□□□□ -0.61
ABCF1-202ENST00000376545 EFNA5P52803 228 aa11.24□□□□□ -0.61
ABCF1-202ENST00000376545 MYL6P60660 151 aa11.24□□□□□ -0.61
ABCF1-202ENST00000376545 CENPUQ71F23 418 aa11.24□□□□□ -0.61
ABCF1-202ENST00000376545 PNMA8AQ86V59 439 aaPredicted RBP11.24□□□□□ -0.61
ABCF1-202ENST00000376545 ACO2Q99798 780 aaKnown RBP11.24□□□□□ -0.61
ABCF1-202ENST00000376545 IMPG2Q9BZV3 1241 aa11.24□□□□□ -0.61
ABCF1-202ENST00000376545 SIGLEC16A6NMB1 481 aa11.23□□□□□ -0.61
ABCF1-202ENST00000376545 ELF1P32519 619 aa11.23□□□□□ -0.61
ABCF1-202ENST00000376545 RPA3P35244 121 aaPredicted RBP11.23□□□□□ -0.61
ABCF1-202ENST00000376545 SSR1P43307 286 aaKnown RBP11.23□□□□□ -0.61
ABCF1-202ENST00000376545 SURF1Q15526 300 aa11.23□□□□□ -0.61
ABCF1-202ENST00000376545 SEZ6Q53EL9 994 aa11.23□□□□□ -0.61
ABCF1-202ENST00000376545 GPAT2Q6NUI2 795 aa11.23□□□□□ -0.61
ABCF1-202ENST00000376545 ADGRD1Q6QNK2 874 aa11.23□□□□□ -0.61
ABCF1-202ENST00000376545 CHST13Q8NET6 341 aa11.23□□□□□ -0.61
ABCF1-202ENST00000376545 UTP4Q969X6 686 aaKnown RBP11.23□□□□□ -0.61
ABCF1-202ENST00000376545 TMEM237Q96Q45 408 aa11.23□□□□□ -0.61
ABCF1-202ENST00000376545 WDR83Q9BRX9 315 aaKnown RBP11.23□□□□□ -0.61
ABCF1-202ENST00000376545 LRMDAQ9H2I8 198 aa11.23□□□□□ -0.61
ABCF1-202ENST00000376545 PSMC3IPQ9P2W1 217 aaPredicted RBP11.23□□□□□ -0.61
ABCF1-202ENST00000376545 CHKBQ9Y259 395 aa11.23□□□□□ -0.61
ABCF1-202ENST00000376545 USH1CQ9Y6N9 552 aa11.23□□□□□ -0.61
ABCF1-202ENST00000376545 PAPPA2Q9BXP8 1791 aa11.23□□□□□ -0.61
ABCF1-202ENST00000376545 SPAG7O75391 227 aa11.23□□□□□ -0.61
ABCF1-202ENST00000376545 HOXC6P09630 235 aa11.23□□□□□ -0.61
ABCF1-202ENST00000376545 TSHRP16473 764 aa11.23□□□□□ -0.61
ABCF1-202ENST00000376545 E2F5Q15329 346 aa11.23□□□□□ -0.61
ABCF1-202ENST00000376545 SLC1A5Q15758 541 aa11.23□□□□□ -0.61
ABCF1-202ENST00000376545 BBS12Q6ZW61 710 aa11.23□□□□□ -0.61
ABCF1-202ENST00000376545 C10orf82Q8WW14 230 aa11.23□□□□□ -0.61
ABCF1-202ENST00000376545 CPT1BQ92523 772 aa11.23□□□□□ -0.61
ABCF1-202ENST00000376545 FAXDC2Q96IV6 333 aa11.23□□□□□ -0.61
ABCF1-202ENST00000376545 SMC6Q96SB8 1091 aa11.23□□□□□ -0.61
ABCF1-202ENST00000376545 TMEM121Q9BTD3 319 aa11.23□□□□□ -0.61
ABCF1-202ENST00000376545 MTMR12Q9C0I1 747 aa11.23□□□□□ -0.61
ABCF1-202ENST00000376545 MYLK2Q9H1R3 596 aa11.23□□□□□ -0.61
ABCF1-202ENST00000376545 KIF9Q9HAQ2 790 aa11.23□□□□□ -0.61
ABCF1-202ENST00000376545 PTPRHQ9HD43 1115 aa11.23□□□□□ -0.61
ABCF1-202ENST00000376545 NRBP2Q9NSY0 501 aa11.23□□□□□ -0.61
ABCF1-202ENST00000376545 HOXC10Q9NYD6 342 aa11.23□□□□□ -0.61
ABCF1-202ENST00000376545 STRIP2Q9ULQ0 834 aa11.23□□□□□ -0.61
ABCF1-202ENST00000376545 IGKV6-21A0A0C4DH24 114 aa11.22□□□□□ -0.61
ABCF1-202ENST00000376545 OGTO15294 1046 aa11.22□□□□□ -0.61
ABCF1-202ENST00000376545 UBA1P22314 1058 aaKnown RBP11.22□□□□□ -0.61
ABCF1-202ENST00000376545 GEMIN4P57678 1058 aaKnown RBP11.22□□□□□ -0.61
ABCF1-202ENST00000376545 DUOXA2Q1HG44 320 aa11.22□□□□□ -0.61
ABCF1-202ENST00000376545 ACCSLQ4AC99 568 aa11.22□□□□□ -0.61
ABCF1-202ENST00000376545 SH3D19Q5HYK7 790 aa11.22□□□□□ -0.61
ABCF1-202ENST00000376545 ERICH1Q86X53 443 aa11.22□□□□□ -0.61
ABCF1-202ENST00000376545 PPIL6Q8IXY8 311 aa11.22□□□□□ -0.61
ABCF1-202ENST00000376545 THNSL1Q8IYQ7 743 aa11.22□□□□□ -0.61
ABCF1-202ENST00000376545 ZBED8Q8IZ13 594 aa11.22□□□□□ -0.61
ABCF1-202ENST00000376545 KIAA0319LQ8IZA0 1049 aa11.22□□□□□ -0.61
ABCF1-202ENST00000376545 MAK16Q9BXY0 300 aaKnown RBP11.22□□□□□ -0.61
ABCF1-202ENST00000376545 MRPL4Q9BYD3 311 aaKnown RBP11.22□□□□□ -0.61
ABCF1-202ENST00000376545 EPB41L3Q9Y2J2 1087 aaPredicted RBP11.22□□□□□ -0.61
ABCF1-202ENST00000376545 ZSWIM8A7E2V4 1837 aa11.22□□□□□ -0.61
ABCF1-202ENST00000376545 SMAPO00193 183 aa11.22□□□□□ -0.61
ABCF1-202ENST00000376545 TRAFD1O14545 582 aaPredicted RBP11.22□□□□□ -0.61
ABCF1-202ENST00000376545 LRCH4O75427 683 aa11.22□□□□□ -0.61
ABCF1-202ENST00000376545 FGFR1P11362 822 aa11.22□□□□□ -0.61
ABCF1-202ENST00000376545 IL1R2P27930 398 aa11.22□□□□□ -0.61
ABCF1-202ENST00000376545 NF2P35240 595 aa11.22□□□□□ -0.61
ABCF1-202ENST00000376545 PDIA2Q13087 525 aaKnown RBP11.22□□□□□ -0.61
ABCF1-202ENST00000376545 NOL9Q5SY16 702 aaKnown RBP11.22□□□□□ -0.61
ABCF1-202ENST00000376545 DCUN1D2Q6PH85 259 aa11.22□□□□□ -0.61
ABCF1-202ENST00000376545 SAMD7Q7Z3H4 446 aa11.22□□□□□ -0.61
ABCF1-202ENST00000376545 TTC13Q8NBP0 860 aa11.22□□□□□ -0.61
ABCF1-202ENST00000376545 PRPF31Q8WWY3 499 aaKnown RBP11.22□□□□□ -0.61
ABCF1-202ENST00000376545 STAMBPL1Q96FJ0 436 aa11.22□□□□□ -0.61
ABCF1-202ENST00000376545 PICK1Q9NRD5 415 aa11.22□□□□□ -0.61
ABCF1-202ENST00000376545 TXLNGQ9NUQ3 528 aa11.22□□□□□ -0.61
ABCF1-202ENST00000376545 CYTH4Q9UIA0 394 aa11.22□□□□□ -0.61
ABCF1-202ENST00000376545 TRIM33Q9UPN9 1127 aa11.22□□□□□ -0.61
ABCF1-202ENST00000376545 C15orf41Q9Y2V0 281 aa11.22□□□□□ -0.61
ABCF1-202ENST00000376545 AFG3L2Q9Y4W6 797 aa11.22□□□□□ -0.61
ABCF1-202ENST00000376545 A0A1W2PPM1 405 aa11.22□□□□□ -0.61
ABCF1-202ENST00000376545 POC1B-GALNT4F8VUJ3 575 aa11.22□□□□□ -0.61
ABCF1-202ENST00000376545 B4GALT4O60513 344 aa11.22□□□□□ -0.61
ABCF1-202ENST00000376545 ZWINTO95229 277 aa11.22□□□□□ -0.61
ABCF1-202ENST00000376545 T-ENOLP0DO92 83 aa11.22□□□□□ -0.61
ABCF1-202ENST00000376545 RFC1P35251 1148 aaPredicted RBP11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 79.1 ms