RNA–Protein interactions for RNA: ENST00000375340.10

SMC1A-202, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 1 (best) BASIC

Gene SMC1A, Length 9,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-202ENST00000375340 MCOLN2Q8IZK6 566 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 UNKQ9C0B0 810 aaKnown RBP6.84□□□□□ -1.31
SMC1A-202ENST00000375340 KCTD10Q9H3F6 313 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 ARHGAP26Q9UNA1 814 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 FZD1Q9UP38 647 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 AURKCQ9UQB9 309 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 ANGPTL3Q9Y5C1 460 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 ITGB3P05106 788 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 ACCSLQ4AC99 568 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 ATF7IP2Q5U623 682 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 DSTYKQ6XUX3 929 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 HACE1Q8IYU2 909 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 FAM167AQ96KS9 214 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 AGPSO00116 658 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 ATP9AO75110 1047 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 ENO3P13929 434 aaPredicted RBP6.84□□□□□ -1.31
SMC1A-202ENST00000375340 STAT5BP51692 787 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 ACTR2P61160 394 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 SGSM1Q2NKQ1 1148 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 BZW1Q7L1Q6 419 aaKnown RBP6.84□□□□□ -1.31
SMC1A-202ENST00000375340 SUGP1Q8IWZ8 645 aaKnown RBP6.84□□□□□ -1.31
SMC1A-202ENST00000375340 CD302Q8IX05 232 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 EMC1Q8N766 993 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 E2F7Q96AV8 911 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 ATG4CQ96DT6 458 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 PRMT6Q96LA8 375 aaPredicted RBP6.84□□□□□ -1.31
SMC1A-202ENST00000375340 WDR18Q9BV38 432 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 ZFATQ9P243 1243 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 O00370 1275 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 MOCS2O96007 188 aaPredicted RBP6.84□□□□□ -1.31
SMC1A-202ENST00000375340 GCLCP48506 637 aaPredicted RBP6.84□□□□□ -1.31
SMC1A-202ENST00000375340 SATB1Q01826 763 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 TFDP3Q5H9I0 405 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 SPOUT1Q5T280 376 aaKnown RBP6.84□□□□□ -1.31
SMC1A-202ENST00000375340 MICALL2Q8IY33 904 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 CDC26Q8NHZ8 85 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 TTC8Q8TAM2 541 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 OTUD5Q96G74 571 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 GJD4Q96KN9 370 aaPredicted RBP6.84□□□□□ -1.31
SMC1A-202ENST00000375340 PURBQ96QR8 312 aaKnown RBP6.84□□□□□ -1.31
SMC1A-202ENST00000375340 ARMCX1Q9P291 453 aa6.84□□□□□ -1.31
SMC1A-202ENST00000375340 DCCP43146 1447 aa6.84□□□□□ -1.32
SMC1A-202ENST00000375340 PDAP1Q13442 181 aaKnown RBP6.84□□□□□ -1.32
SMC1A-202ENST00000375340 CNGA2Q16280 664 aa6.84□□□□□ -1.32
SMC1A-202ENST00000375340 OLFM3Q96PB7 478 aa6.84□□□□□ -1.32
SMC1A-202ENST00000375340 WDR46O15213 610 aaKnown RBP6.83□□□□□ -1.32
SMC1A-202ENST00000375340 CAP2P40123 477 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 EFHC2Q5JST6 749 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 SLC30A9Q6PML9 568 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 RNF168Q8IYW5 571 aaPredicted RBP6.83□□□□□ -1.32
SMC1A-202ENST00000375340 RIBC1Q8N443 379 aaPredicted RBP6.83□□□□□ -1.32
SMC1A-202ENST00000375340 NCLNQ969V3 563 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 SAE1Q9UBE0 346 aaPredicted RBP6.83□□□□□ -1.32
SMC1A-202ENST00000375340 V9GYQ6 96 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 XPO1O14980 1071 aaKnown RBP6.83□□□□□ -1.32
SMC1A-202ENST00000375340 HADHAP40939 763 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 DYNC1I2Q13409 638 aaKnown RBP6.83□□□□□ -1.32
SMC1A-202ENST00000375340 VPS72Q15906 364 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 RARS2Q5T160 578 aaKnown RBP6.83□□□□□ -1.32
SMC1A-202ENST00000375340 BEST2Q8NFU1 509 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 CYGBQ8WWM9 190 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 ALKBH8Q96BT7 664 aaKnown RBP6.83□□□□□ -1.32
SMC1A-202ENST00000375340 SIK2Q9H0K1 926 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 FBXO40Q9UH90 709 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 PCDHA3Q9Y5H8 950 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 NR3C2P08235 984 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 EEF1DP29692 281 aaKnown RBP6.83□□□□□ -1.32
SMC1A-202ENST00000375340 AQP5P55064 265 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 IRX1P78414 480 aaPredicted RBP6.83□□□□□ -1.32
SMC1A-202ENST00000375340 DEUP1Q05D60 604 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 SLC10A5Q5PT55 438 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 ARID3BQ8IVW6 561 aaPredicted RBP6.83□□□□□ -1.32
SMC1A-202ENST00000375340 AGAP11Q8TF27 550 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 SH3GL2Q99962 352 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 EFHD1Q9BUP0 239 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 CEP41Q9BYV8 373 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 PXMP2Q9NR77 195 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 DNPEPQ9ULA0 475 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 CDYLQ9Y232 598 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 C15orf41Q9Y2V0 281 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 LOC100653049A0A140TA62 436 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 KRT34O76011 436 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 PAMP19021 973 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 ESRRGP62508 458 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 EML3Q32P44 896 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 OTOP1Q7RTM1 612 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 ZNF677Q86XU0 584 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 RIT2Q99578 217 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 ELP3Q9H9T3 547 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 KCNMB3Q9NPA1 279 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 HOXC10Q9NYD6 342 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 MCM8Q9UJA3 840 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 ECM29Q5VYK3 1845 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 PCSK7Q16549 785 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 ARSHQ5FYA8 562 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 NPNTQ6UXI9 565 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 FUKQ8N0W3 1084 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 RFWD2Q8NHY2 731 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 NIF3L1Q9GZT8 377 aa6.83□□□□□ -1.32
SMC1A-202ENST00000375340 KIAA1683Q9H0B3 1180 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms