RNA–Protein interactions for RNA: ENST00000375218.3

UBR4-201, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2 BASIC

Gene UBR4, Length 4,031 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-201ENST00000375218 A0A087WV62 115 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 MAGEB16A2A368 324 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 PYGMP11217 842 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 PRKACAP17612 351 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 ALDH3A1P30838 453 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 MAPK4P31152 587 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 CAMK2DQ13557 499 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 GALNT3Q14435 633 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 MRM1Q6IN84 353 aaKnown RBP9.52□□□□□ -0.89
UBR4-201ENST00000375218 LRRC34Q8IZ02 419 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 ZNF527Q8NB42 609 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 SLC30A5Q8TAD4 765 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 RAPGEF4Q8WZA2 1011 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 PHF12Q96QT6 1004 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 DRC3Q9H069 523 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 PDE7BQ9NP56 450 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 TBCCD1Q9NVR7 557 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 RHBDL2Q9NX52 303 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 HMGXB4Q9UGU5 601 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 MBD1Q9UIS9 605 aaPredicted RBP9.52□□□□□ -0.89
UBR4-201ENST00000375218 MAPRE3Q9UPY8 281 aa9.52□□□□□ -0.89
UBR4-201ENST00000375218 A0A087WZG4 1122 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 E7EVH7 732 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 H0YCG3 227 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 WEE2P0C1S8 567 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 PRG2P13727 222 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 CCT4P50991 539 aaKnown RBP9.51□□□□□ -0.89
UBR4-201ENST00000375218 RNASE9P60153 205 aaKnown RBP9.51□□□□□ -0.89
UBR4-201ENST00000375218 EML3Q32P44 896 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 LRIT3Q3SXY7 679 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 BANPQ8N9N5 519 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 FUBP3Q96I24 572 aaKnown RBP eCLIP9.51□□□□□ -0.89
UBR4-201ENST00000375218 EDEM2Q9BV94 578 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 KCND1Q9NSA2 647 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 ASH2LQ9UBL3 628 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 ANKRD6Q9Y2G4 727 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 MED23Q9ULK4 1368 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 PPEF2O14830 753 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 BACH1O14867 736 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 RNF113AO15541 343 aaKnown RBP9.51□□□□□ -0.89
UBR4-201ENST00000375218 NIPSNAP2O75323 286 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 PSAPP07602 524 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 TRA2BP62995 288 aaKnown RBP9.51□□□□□ -0.89
UBR4-201ENST00000375218 GTF2IP78347 998 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 ZNF827Q17R98 1081 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 PDPK2PQ6A1A2 396 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 FBXL19Q6PCT2 694 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 P3H2Q8IVL5 708 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 BTN2A2Q8WVV5 523 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 BAIAP2L1Q9UHR4 511 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 L1RE1Q9UN81 338 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 CFL2Q9Y281 166 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 TLR6Q9Y2C9 796 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 BZW2Q9Y6E2 419 aaKnown RBP9.51□□□□□ -0.89
UBR4-201ENST00000375218 A0A0U1RQK1 487 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 ZNF320A2RRD8 509 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 LRRIQ3A6PVS8 624 aaPredicted RBP9.51□□□□□ -0.89
UBR4-201ENST00000375218 PRPSAP2O60256 369 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 MAFKO60675 156 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 ERAL1O75616 437 aaKnown RBP9.51□□□□□ -0.89
UBR4-201ENST00000375218 DHPSP49366 369 aaPredicted RBP9.51□□□□□ -0.89
UBR4-201ENST00000375218 KRT17Q04695 432 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 TCAIMQ8N3R3 496 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 PRR18Q8N4B5 295 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 EHBP1Q8NDI1 1231 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 RHPN1Q8TCX5 695 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.51□□□□□ -0.89
UBR4-201ENST00000375218 FAM216AQ8WUB2 273 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 PHF24Q9UPV7 400 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 SLX4Q8IY92 1834 aa9.51□□□□□ -0.89
UBR4-201ENST00000375218 VCANP13611 3396 aa9.5□□□□□ -0.89
UBR4-201ENST00000375218 OR6C65A6NJZ3 312 aa9.5□□□□□ -0.89
UBR4-201ENST00000375218 GOLGA8RI6L899 631 aa9.5□□□□□ -0.89
UBR4-201ENST00000375218 BCAS2O75934 225 aaPredicted RBP9.5□□□□□ -0.89
UBR4-201ENST00000375218 SCAF4O95104 1147 aaKnown RBP9.5□□□□□ -0.89
UBR4-201ENST00000375218 MSH2P43246 934 aa9.5□□□□□ -0.89
UBR4-201ENST00000375218 GPC3P51654 580 aa9.5□□□□□ -0.89
UBR4-201ENST00000375218 ADCK5Q3MIX3 580 aa9.5□□□□□ -0.89
UBR4-201ENST00000375218 PRPF40BQ6NWY9 871 aaKnown RBP9.5□□□□□ -0.89
UBR4-201ENST00000375218 MICALL2Q8IY33 904 aa9.5□□□□□ -0.89
UBR4-201ENST00000375218 CCDC155Q8N6L0 562 aa9.5□□□□□ -0.89
UBR4-201ENST00000375218 IARS2Q9NSE4 1012 aaKnown RBP9.5□□□□□ -0.89
UBR4-201ENST00000375218 DNAJB9Q9UBS3 223 aa9.5□□□□□ -0.89
UBR4-201ENST00000375218 KCNH4Q9UQ05 1017 aa9.5□□□□□ -0.89
UBR4-201ENST00000375218 AURKCQ9UQB9 309 aa9.5□□□□□ -0.89
UBR4-201ENST00000375218 DNAH14Q0VDD8 3507 aa9.5□□□□□ -0.89
UBR4-201ENST00000375218 ADRB2P07550 413 aa9.5□□□□□ -0.89
UBR4-201ENST00000375218 TUBA3EQ6PEY2 450 aa9.5□□□□□ -0.89
UBR4-201ENST00000375218 HSPBAP1Q96EW2 488 aa9.5□□□□□ -0.89
UBR4-201ENST00000375218 EYA3Q99504 573 aa9.5□□□□□ -0.89
UBR4-201ENST00000375218 NYXQ9GZU5 481 aa9.5□□□□□ -0.89
UBR4-201ENST00000375218 SARS2Q9NP81 518 aaKnown RBP9.5□□□□□ -0.89
UBR4-201ENST00000375218 SDAD1Q9NVU7 687 aaKnown RBP eCLIP9.5□□□□□ -0.896e-7■■■■□ 22.4
UBR4-201ENST00000375218 POLIQ9UNA4 740 aa9.5□□□□□ -0.89
UBR4-201ENST00000375218 EIF1AYO14602 144 aaKnown RBP9.5□□□□□ -0.89
UBR4-201ENST00000375218 FRAT2O75474 233 aaPredicted RBP9.5□□□□□ -0.89
UBR4-201ENST00000375218 PRKD3O94806 890 aa9.5□□□□□ -0.89
UBR4-201ENST00000375218 PRAMEF12O95522 483 aa9.5□□□□□ -0.89
UBR4-201ENST00000375218 CYP2C19P33261 490 aa9.5□□□□□ -0.89
UBR4-201ENST00000375218 HOXD13P35453 343 aa9.5□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms