RNA–Protein interactions for RNA: ENST00000374446.6

ZNF239-202, Transcript of zinc finger protein 239, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ZNF239, Length 2,037 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF239-202ENST00000374446 SUSD3Q96L08 255 aa12.79□□□□□ -0.36
ZNF239-202ENST00000374446 CALR3Q96L12 384 aaKnown RBP12.79□□□□□ -0.36
ZNF239-202ENST00000374446 LPIN3Q9BQK8 851 aa12.79□□□□□ -0.36
ZNF239-202ENST00000374446 MRPL9Q9BYD2 267 aaKnown RBP12.79□□□□□ -0.36
ZNF239-202ENST00000374446 NRDE2Q9H7Z3 1164 aa12.79□□□□□ -0.36
ZNF239-202ENST00000374446 AVENQ9NQS1 362 aaPredicted RBP12.79□□□□□ -0.36
ZNF239-202ENST00000374446 FAM49BQ9NUQ9 324 aa12.79□□□□□ -0.36
ZNF239-202ENST00000374446 DDX43Q9NXZ2 648 aaKnown RBP12.79□□□□□ -0.36
ZNF239-202ENST00000374446 TSPAN16Q9UKR8 245 aa12.79□□□□□ -0.36
ZNF239-202ENST00000374446 SCN5AQ14524 2016 aa12.79□□□□□ -0.36
ZNF239-202ENST00000374446 TMEM189-UBE2V1I3L0A0 370 aa12.78□□□□□ -0.36
ZNF239-202ENST00000374446 ALDH2P05091 517 aa12.78□□□□□ -0.36
ZNF239-202ENST00000374446 CYP11A1P05108 521 aa12.78□□□□□ -0.36
ZNF239-202ENST00000374446 RRM1P23921 792 aa12.78□□□□□ -0.36
ZNF239-202ENST00000374446 GPD2P43304 727 aa12.78□□□□□ -0.36
ZNF239-202ENST00000374446 HADHBP55084 474 aaKnown RBP12.78□□□□□ -0.36
ZNF239-202ENST00000374446 PTP4A2Q12974 167 aa12.78□□□□□ -0.36
ZNF239-202ENST00000374446 GOLGA7BQ2TAP0 167 aa12.78□□□□□ -0.36
ZNF239-202ENST00000374446 PHLDB2Q86SQ0 1253 aa12.78□□□□□ -0.36
ZNF239-202ENST00000374446 METTL23Q86XA0 190 aa12.78□□□□□ -0.36
ZNF239-202ENST00000374446 B3GALNT2Q8NCR0 500 aa12.78□□□□□ -0.36
ZNF239-202ENST00000374446 NUP85Q9BW27 656 aa12.78□□□□□ -0.36
ZNF239-202ENST00000374446 UVRAGQ9P2Y5 699 aa12.78□□□□□ -0.36
ZNF239-202ENST00000374446 DSEQ9UL01 958 aa12.78□□□□□ -0.36
ZNF239-202ENST00000374446 PRG3Q9Y2Y8 225 aaPredicted RBP12.78□□□□□ -0.36
ZNF239-202ENST00000374446 TANC1Q9C0D5 1861 aa12.78□□□□□ -0.36
ZNF239-202ENST00000374446 ARHGEF37A1IGU5 675 aa12.78□□□□□ -0.36
ZNF239-202ENST00000374446 ATP2C2O75185 946 aa12.78□□□□□ -0.36
ZNF239-202ENST00000374446 TADA2AO75478 443 aa12.78□□□□□ -0.36
ZNF239-202ENST00000374446 MTA2O94776 668 aa12.78□□□□□ -0.36
ZNF239-202ENST00000374446 ATP1A1P05023 1023 aaKnown RBP12.78□□□□□ -0.36
ZNF239-202ENST00000374446 CALB1P05937 261 aa12.78□□□□□ -0.36
ZNF239-202ENST00000374446 PFKMP08237 780 aa12.78□□□□□ -0.36
ZNF239-202ENST00000374446 PTPN1P18031 435 aaKnown RBP12.78□□□□□ -0.36
ZNF239-202ENST00000374446 ACAT1P24752 427 aaKnown RBP12.78□□□□□ -0.36
ZNF239-202ENST00000374446 LRRC57Q8N9N7 239 aa12.78□□□□□ -0.36
ZNF239-202ENST00000374446 SPATA18Q8TC71 538 aa12.78□□□□□ -0.36
ZNF239-202ENST00000374446 HESX1Q9UBX0 185 aa12.78□□□□□ -0.36
ZNF239-202ENST00000374446 PRKAG2Q9UGJ0 569 aa12.78□□□□□ -0.36
ZNF239-202ENST00000374446 CYTH4Q9UIA0 394 aa12.78□□□□□ -0.36
ZNF239-202ENST00000374446 NRP1O14786 923 aa12.77□□□□□ -0.37
ZNF239-202ENST00000374446 TRAPPC3O43617 180 aa12.77□□□□□ -0.37
ZNF239-202ENST00000374446 BUB1BO60566 1050 aaPredicted RBP12.77□□□□□ -0.37
ZNF239-202ENST00000374446 EFCAB14O75071 495 aa12.77□□□□□ -0.37
ZNF239-202ENST00000374446 FTCDO95954 541 aa12.77□□□□□ -0.37
ZNF239-202ENST00000374446 AMHP03971 560 aa12.77□□□□□ -0.37
ZNF239-202ENST00000374446 ACRP10323 421 aa12.77□□□□□ -0.37
ZNF239-202ENST00000374446 CCDC130P13994 396 aa12.77□□□□□ -0.37
ZNF239-202ENST00000374446 PSMC1P62191 440 aaKnown RBP12.77□□□□□ -0.37
ZNF239-202ENST00000374446 DAAM2Q86T65 1068 aa12.77□□□□□ -0.37
ZNF239-202ENST00000374446 SYCE1Q8N0S2 351 aa12.77□□□□□ -0.37
ZNF239-202ENST00000374446 ZNF564Q8TBZ8 553 aaPredicted RBP12.77□□□□□ -0.37
ZNF239-202ENST00000374446 TOP1MTQ969P6 601 aa12.77□□□□□ -0.37
ZNF239-202ENST00000374446 COLEC11Q9BWP8 271 aa12.77□□□□□ -0.37
ZNF239-202ENST00000374446 PCDHB8Q9UN66 801 aa12.77□□□□□ -0.37
ZNF239-202ENST00000374446 FAN1Q9Y2M0 1017 aa12.77□□□□□ -0.37
ZNF239-202ENST00000374446 TTC3P53804 2025 aa12.77□□□□□ -0.37
ZNF239-202ENST00000374446 DGKIO75912 1065 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 TYMPP19971 482 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 PCSK1P29120 753 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 PTPN20Q4JDL3 420 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 PKDCCQ504Y2 493 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 KIAA0319Q5VV43 1072 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 PAPD7Q5XG87 772 aaKnown RBP12.76□□□□□ -0.37
ZNF239-202ENST00000374446 PLEKHA7Q6IQ23 1121 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 LLGL2Q6P1M3 1020 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 SLFN11Q7Z7L1 901 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 TTC30AQ86WT1 665 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 ANKRD52Q8NB46 1076 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 MSANTD4Q8NCY6 345 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 SLC2A14Q8TDB8 520 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 TMEM175Q9BSA9 504 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 MRPL47Q9HD33 250 aaKnown RBP12.76□□□□□ -0.37
ZNF239-202ENST00000374446 IL23AQ9NPF7 189 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 CDH9Q9ULB4 789 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 GALTP07902 379 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 ADORA2BP29275 332 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 SLC11A1P49279 550 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 PDCLQ13371 301 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 MAMLD1Q13495 774 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 TUBB2AQ13885 445 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 MEI1Q5TIA1 1274 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 OVOS1Q6IE37 1185 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 THEM5Q8N1Q8 247 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 LRRC43Q8N309 656 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 C18orf8Q96DM3 657 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 CPXM1Q96SM3 734 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 HNRNPABQ99729 332 aaKnown RBP12.76□□□□□ -0.37
ZNF239-202ENST00000374446 RTP3Q9BQQ7 232 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 SYT15Q9BQS2 421 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 ACBD6Q9BR61 282 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 TUBB2BQ9BVA1 445 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 GOLPH3Q9H4A6 298 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 SYNCQ9H7C4 482 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 L2HGDHQ9H9P8 463 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 PARVAQ9NVD7 372 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 PCDH10Q9P2E7 1040 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 HCSTQ9UBK5 93 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 STRIP2Q9ULQ0 834 aa12.76□□□□□ -0.37
ZNF239-202ENST00000374446 SCINQ9Y6U3 715 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms