RNA–Protein interactions for RNA: ENST00000372755.7

VCL-202, Transcript of vinculin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCL, Length 6,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-202ENST00000372755 SFSWAPQ12872 951 aaKnown RBP12.01□□□□□ -0.49
VCL-202ENST00000372755 C10orf120Q5SQS8 335 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 NOTUMQ6P988 496 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 TFB1MQ8WVM0 346 aaKnown RBP12.01□□□□□ -0.49
VCL-202ENST00000372755 HPS3Q969F9 1004 aa12.01□□□□□ -0.49
VCL-202ENST00000372755 TMEM120BA0PK00 339 aa12□□□□□ -0.49
VCL-202ENST00000372755 ALBP02768 609 aa12□□□□□ -0.49
VCL-202ENST00000372755 FAM200BP0CF97 657 aa12□□□□□ -0.49
VCL-202ENST00000372755 MAPK1P28482 360 aa12□□□□□ -0.49
VCL-202ENST00000372755 ETFBP38117 255 aa12□□□□□ -0.49
VCL-202ENST00000372755 STX5Q13190 355 aa12□□□□□ -0.49
VCL-202ENST00000372755 CHI3L2Q15782 390 aa12□□□□□ -0.49
VCL-202ENST00000372755 HOMEZQ8IX15 550 aa12□□□□□ -0.49
VCL-202ENST00000372755 CHST13Q8NET6 341 aa12□□□□□ -0.49
VCL-202ENST00000372755 SYN2Q92777 582 aaPredicted RBP12□□□□□ -0.49
VCL-202ENST00000372755 CNDP1Q96KN2 507 aa12□□□□□ -0.49
VCL-202ENST00000372755 CHP1Q99653 195 aa12□□□□□ -0.49
VCL-202ENST00000372755 ECSITQ9BQ95 431 aa12□□□□□ -0.49
VCL-202ENST00000372755 METTL5Q9NRN9 209 aaKnown RBP12□□□□□ -0.49
VCL-202ENST00000372755 ERAP1Q9NZ08 941 aa12□□□□□ -0.49
VCL-202ENST00000372755 TRMT6Q9UJA5 497 aaKnown RBP12□□□□□ -0.49
VCL-202ENST00000372755 NAGPAQ9UK23 515 aa12□□□□□ -0.49
VCL-202ENST00000372755 SLC39A10Q9ULF5 831 aa12□□□□□ -0.49
VCL-202ENST00000372755 GTF3C5Q9Y5Q8 519 aaPredicted RBP12□□□□□ -0.49
VCL-202ENST00000372755 AFF2P51816 1311 aa12□□□□□ -0.49
VCL-202ENST00000372755 GRAP2O75791 330 aa12□□□□□ -0.49
VCL-202ENST00000372755 CYP2C9P11712 490 aa12□□□□□ -0.49
VCL-202ENST00000372755 PHKG1Q16816 387 aa12□□□□□ -0.49
VCL-202ENST00000372755 TRIM48Q8IWZ4 208 aa12□□□□□ -0.49
VCL-202ENST00000372755 MICU2Q8IYU8 434 aa12□□□□□ -0.49
VCL-202ENST00000372755 DPF2Q92785 391 aa12□□□□□ -0.49
VCL-202ENST00000372755 ZNF669Q96BR6 464 aaPredicted RBP12□□□□□ -0.49
VCL-202ENST00000372755 MXRA8Q9BRK3 442 aa12□□□□□ -0.49
VCL-202ENST00000372755 TUBGCP4Q9UGJ1 667 aa12□□□□□ -0.49
VCL-202ENST00000372755 MYO5CQ9NQX4 1742 aa12□□□□□ -0.49
VCL-202ENST00000372755 STX7O15400 261 aaKnown RBP12□□□□□ -0.49
VCL-202ENST00000372755 CAND2O75155 1236 aa12□□□□□ -0.49
VCL-202ENST00000372755 SERPINB1P30740 379 aa12□□□□□ -0.49
VCL-202ENST00000372755 PTPN7P35236 360 aa12□□□□□ -0.49
VCL-202ENST00000372755 OR1G1P47890 313 aa12□□□□□ -0.49
VCL-202ENST00000372755 PRIM2P49643 509 aa12□□□□□ -0.49
VCL-202ENST00000372755 TAF6P49848 677 aa12□□□□□ -0.49
VCL-202ENST00000372755 TMEM154Q6P9G4 183 aa12□□□□□ -0.49
VCL-202ENST00000372755 RDM1Q8NG50 284 aa12□□□□□ -0.49
VCL-202ENST00000372755 A2ML1A8K2U0 1454 aa12□□□□□ -0.49
VCL-202ENST00000372755 RASSF9O75901 435 aa12□□□□□ -0.49
VCL-202ENST00000372755 NCAM1P13591 858 aa12□□□□□ -0.49
VCL-202ENST00000372755 EPB42P16452 691 aa12□□□□□ -0.49
VCL-202ENST00000372755 TCN1P20061 433 aaPredicted RBP12□□□□□ -0.49
VCL-202ENST00000372755 MUTP22033 750 aa12□□□□□ -0.49
VCL-202ENST00000372755 CYLC2Q14093 348 aaPredicted RBP12□□□□□ -0.49
VCL-202ENST00000372755 TBC1D16Q8TBP0 767 aa12□□□□□ -0.49
VCL-202ENST00000372755 PLA2G12BQ9BX93 195 aa12□□□□□ -0.49
VCL-202ENST00000372755 ISCUQ9H1K1 167 aa12□□□□□ -0.49
VCL-202ENST00000372755 RMND5AQ9H871 391 aa12□□□□□ -0.49
VCL-202ENST00000372755 ANKEF1Q9NU02 776 aa12□□□□□ -0.49
VCL-202ENST00000372755 PCDHB7Q9Y5E2 793 aa12□□□□□ -0.49
VCL-202ENST00000372755 MYMKA6NI61 221 aa12□□□□□ -0.49
VCL-202ENST00000372755 PSMD14O00487 310 aa12□□□□□ -0.49
VCL-202ENST00000372755 UPP2O95045 317 aa12□□□□□ -0.49
VCL-202ENST00000372755 GTF2H1P32780 548 aa12□□□□□ -0.49
VCL-202ENST00000372755 NR1I3Q14994 352 aa12□□□□□ -0.49
VCL-202ENST00000372755 DGKDQ16760 1214 aa12□□□□□ -0.49
VCL-202ENST00000372755 BOLA3Q53S33 107 aa12□□□□□ -0.49
VCL-202ENST00000372755 AGAP9Q5VTM2 703 aa12□□□□□ -0.49
VCL-202ENST00000372755 EFCAB12Q6NXP0 572 aa12□□□□□ -0.49
VCL-202ENST00000372755 SH2D3CQ8N5H7 860 aa12□□□□□ -0.49
VCL-202ENST00000372755 RBM12Q9NTZ6 932 aaKnown RBP12□□□□□ -0.49
VCL-202ENST00000372755 C2orf81A6NN90 581 aa11.99□□□□□ -0.49
VCL-202ENST00000372755 RAD51CO43502 376 aa11.99□□□□□ -0.49
VCL-202ENST00000372755 USP1O94782 785 aa11.99□□□□□ -0.49
VCL-202ENST00000372755 RBP3P10745 1247 aa11.99□□□□□ -0.49
VCL-202ENST00000372755 ODC1P11926 461 aa11.99□□□□□ -0.49
VCL-202ENST00000372755 CPT1AP50416 773 aa11.99□□□□□ -0.49
VCL-202ENST00000372755 ANGPT1Q15389 498 aa11.99□□□□□ -0.49
VCL-202ENST00000372755 ERP44Q9BS26 406 aa11.99□□□□□ -0.49
VCL-202ENST00000372755 STN1Q9H668 368 aaKnown RBP11.99□□□□□ -0.49
VCL-202ENST00000372755 IL1RL2Q9HB29 575 aa11.99□□□□□ -0.49
VCL-202ENST00000372755 PSMA4P25789 261 aaKnown RBP11.99□□□□□ -0.49
VCL-202ENST00000372755 ERFP50548 548 aa11.99□□□□□ -0.49
VCL-202ENST00000372755 FAM9CQ8IZT9 166 aa11.99□□□□□ -0.49
VCL-202ENST00000372755 DNAJC7Q99615 494 aa11.99□□□□□ -0.49
VCL-202ENST00000372755 RNF103O00237 685 aa11.99□□□□□ -0.49
VCL-202ENST00000372755 SLC11A2P49281 568 aa11.99□□□□□ -0.49
VCL-202ENST00000372755 NFIXQ14938 502 aa11.99□□□□□ -0.49
VCL-202ENST00000372755 MRNIPQ6NTE8 343 aa11.99□□□□□ -0.49
VCL-202ENST00000372755 ERAP2Q6P179 960 aa11.99□□□□□ -0.49
VCL-202ENST00000372755 CCNJLQ8IV13 435 aa11.99□□□□□ -0.49
VCL-202ENST00000372755 CCDC60Q8IWA6 550 aaPredicted RBP11.99□□□□□ -0.49
VCL-202ENST00000372755 UBA3Q8TBC4 463 aa11.99□□□□□ -0.49
VCL-202ENST00000372755 TUBGCP3Q96CW5 907 aa11.99□□□□□ -0.49
VCL-202ENST00000372755 CCDC126Q96EE4 140 aa11.99□□□□□ -0.49
VCL-202ENST00000372755 HPDLQ96IR7 371 aa11.99□□□□□ -0.49
VCL-202ENST00000372755 MRPS26Q9BYN8 205 aaKnown RBP11.99□□□□□ -0.49
VCL-202ENST00000372755 VCPKMTQ9H867 229 aa11.99□□□□□ -0.49
VCL-202ENST00000372755 AAASQ9NRG9 546 aa11.99□□□□□ -0.49
VCL-202ENST00000372755 IMPAD1Q9NX62 359 aa11.99□□□□□ -0.49
VCL-202ENST00000372755 PRR12Q9ULL5 1215 aa11.99□□□□□ -0.49
VCL-202ENST00000372755 EIF2S1P05198 315 aaKnown RBP11.99□□□□□ -0.49
VCL-202ENST00000372755 COPAP53621 1224 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms