RNA–Protein interactions for RNA: ENST00000370828.3

GPC4-201, Transcript of glypican 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC4, Length 4,960 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4-201ENST00000370828 SF3B3Q15393 1217 aaKnown RBP13.23□□□□□ -0.29
GPC4-201ENST00000370828 CDKL3Q8IVW4 592 aaPredicted RBP13.23□□□□□ -0.29
GPC4-201ENST00000370828 KIAA0895Q8NCT3 520 aa13.23□□□□□ -0.29
GPC4-201ENST00000370828 DIS3LQ8TF46 1054 aaKnown RBP13.23□□□□□ -0.29
GPC4-201ENST00000370828 ZFRQ96KR1 1074 aaKnown RBP13.23□□□□□ -0.29
GPC4-201ENST00000370828 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.23□□□□□ -0.29
GPC4-201ENST00000370828 PXDNLA1KZ92 1463 aa13.23□□□□□ -0.29
GPC4-201ENST00000370828 E9PBE3 544 aa13.23□□□□□ -0.29
GPC4-201ENST00000370828 KLHL41O60662 606 aa13.23□□□□□ -0.29
GPC4-201ENST00000370828 WDR47O94967 919 aa13.23□□□□□ -0.29
GPC4-201ENST00000370828 NPR1P16066 1061 aa13.23□□□□□ -0.29
GPC4-201ENST00000370828 TFE3P19532 575 aaPredicted RBP13.23□□□□□ -0.29
GPC4-201ENST00000370828 RIPK1Q13546 671 aa13.23□□□□□ -0.29
GPC4-201ENST00000370828 ZNF699Q32M78 642 aa13.23□□□□□ -0.29
GPC4-201ENST00000370828 FAXCQ5TGI0 409 aa13.23□□□□□ -0.29
GPC4-201ENST00000370828 BNC2Q6ZN30 1099 aaPredicted RBP13.23□□□□□ -0.29
GPC4-201ENST00000370828 NT5DC3Q86UY8 548 aa13.23□□□□□ -0.29
GPC4-201ENST00000370828 SPATA18Q8TC71 538 aa13.23□□□□□ -0.29
GPC4-201ENST00000370828 TUBGCP3Q96CW5 907 aa13.23□□□□□ -0.29
GPC4-201ENST00000370828 CDYLQ9Y232 598 aa13.23□□□□□ -0.29
GPC4-201ENST00000370828 TMEM191CA6NGB0 347 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 ALBP02768 609 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 ADRA1DP25100 572 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 NLRP11P59045 1033 aaKnown RBP13.22□□□□□ -0.29
GPC4-201ENST00000370828 NSUN2Q08J23 767 aaKnown RBP eCLIP13.22□□□□□ -0.29
GPC4-201ENST00000370828 NKX1-1Q15270 411 aaPredicted RBP13.22□□□□□ -0.29
GPC4-201ENST00000370828 C11orf63Q6NUN7 778 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 RNF148Q8N7C7 305 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 USP13Q92995 863 aaPredicted RBP13.22□□□□□ -0.29
GPC4-201ENST00000370828 LENG1Q96BZ8 264 aaPredicted RBP13.22□□□□□ -0.29
GPC4-201ENST00000370828 PGBD4Q96DM1 585 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 TASP1Q9H6P5 420 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 TRPC7Q9HCX4 862 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 SOX13Q9UN79 622 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 A0A0A6YYK5 440 aaPredicted RBP13.22□□□□□ -0.29
GPC4-201ENST00000370828 M0QYV0 167 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 POLR2EP19388 210 aaKnown RBP13.22□□□□□ -0.29
GPC4-201ENST00000370828 TBXAS1P24557 533 aaPredicted RBP13.22□□□□□ -0.29
GPC4-201ENST00000370828 MAPK11Q15759 364 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 LACTB2Q53H82 288 aaPredicted RBP13.22□□□□□ -0.29
GPC4-201ENST00000370828 PPP1R18Q6NYC8 613 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 AGAP3Q96P47 875 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 RNPEPQ9H4A4 650 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 LRRC4Q9HBW1 653 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 PEX1O43933 1283 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 TBC1D4O60343 1298 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 SGPL1O95470 568 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 FLT3P36888 993 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 SLFN12LQ6IEE8 588 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.22□□□□□ -0.29
GPC4-201ENST00000370828 TERB1Q8NA31 727 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 ISCA1Q9BUE6 129 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 PCDHGC5Q9Y5F6 944 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 PCDHGA3Q9Y5H0 932 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 LINC00854A0A1B0GVQ3 168 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 GTPBP10A4D1E9 387 aaKnown RBP13.22□□□□□ -0.29
GPC4-201ENST00000370828 EPHB6O15197 1021 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 SPAG6O75602 509 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 RTN3O95197 1032 aaPredicted RBP13.22□□□□□ -0.29
GPC4-201ENST00000370828 PRLP01236 227 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 HSPA1AP0DMV8 641 aaKnown RBP13.22□□□□□ -0.29
GPC4-201ENST00000370828 HSPA1BP0DMV9 641 aaKnown RBP13.22□□□□□ -0.29
GPC4-201ENST00000370828 SP100P23497 879 aaPredicted RBP13.22□□□□□ -0.29
GPC4-201ENST00000370828 KRT20P35900 424 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 TSTA3Q13630 321 aaPredicted RBP13.22□□□□□ -0.29
GPC4-201ENST00000370828 RNF43Q68DV7 783 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 RBM44Q6ZP01 1051 aaKnown RBP13.22□□□□□ -0.29
GPC4-201ENST00000370828 ZBTB49Q6ZSB9 765 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 PID1Q7Z2X4 250 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 CHCHD4Q8N4Q1 142 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 EIF1ADQ8N9N8 165 aaKnown RBP13.22□□□□□ -0.29
GPC4-201ENST00000370828 SLC20A1Q8WUM9 679 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 SLCO1B3Q9NPD5 702 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 ADGRA3Q8IWK6 1321 aa13.22□□□□□ -0.29
GPC4-201ENST00000370828 ZNF839A8K0R7 811 aa13.21□□□□□ -0.29
GPC4-201ENST00000370828 MGRN1O60291 552 aa13.21□□□□□ -0.29
GPC4-201ENST00000370828 ALOX15P16050 662 aaPredicted RBP13.21□□□□□ -0.29
GPC4-201ENST00000370828 GALK1P51570 392 aa13.21□□□□□ -0.29
GPC4-201ENST00000370828 MRPL28Q13084 256 aaKnown RBP13.21□□□□□ -0.29
GPC4-201ENST00000370828 DLGAP5Q15398 846 aa13.21□□□□□ -0.29
GPC4-201ENST00000370828 AADACL2Q6P093 401 aa13.21□□□□□ -0.29
GPC4-201ENST00000370828 ANGPTL8Q6UXH0 198 aa13.21□□□□□ -0.29
GPC4-201ENST00000370828 SETD3Q86TU7 594 aaPredicted RBP13.21□□□□□ -0.29
GPC4-201ENST00000370828 CCDC117Q8IWD4 279 aaPredicted RBP13.21□□□□□ -0.29
GPC4-201ENST00000370828 MCRS1Q96EZ8 462 aa13.21□□□□□ -0.29
GPC4-201ENST00000370828 VPS50Q96JG6 964 aa13.21□□□□□ -0.29
GPC4-201ENST00000370828 DCDC2CA8MYV0 355 aa13.21□□□□□ -0.29
GPC4-201ENST00000370828 RARAP10276 462 aa13.21□□□□□ -0.29
GPC4-201ENST00000370828 PYGMP11217 842 aa13.21□□□□□ -0.29
GPC4-201ENST00000370828 TCAIMQ8N3R3 496 aa13.21□□□□□ -0.29
GPC4-201ENST00000370828 RMND5BQ96G75 393 aaPredicted RBP13.21□□□□□ -0.29
GPC4-201ENST00000370828 CCDC28BQ9BUN5 200 aa13.21□□□□□ -0.29
GPC4-201ENST00000370828 NPHP4O75161 1426 aaPredicted RBP13.21□□□□□ -0.29
GPC4-201ENST00000370828 CES2O00748 559 aa13.21□□□□□ -0.29
GPC4-201ENST00000370828 APOL1O14791 398 aa13.21□□□□□ -0.29
GPC4-201ENST00000370828 THRAP10827 490 aa13.21□□□□□ -0.29
GPC4-201ENST00000370828 CHN2P52757 468 aa13.21□□□□□ -0.29
GPC4-201ENST00000370828 FCHO2Q0JRZ9 810 aa13.21□□□□□ -0.29
GPC4-201ENST00000370828 SLC45A4Q5BKX6 768 aa13.21□□□□□ -0.29
GPC4-201ENST00000370828 SULF1Q8IWU6 871 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms