RNA–Protein interactions for RNA: ENST00000370361.5

VMA21-202, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 5 BASIC

Gene VMA21, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-202ENST00000370361 SUMF1Q8NBK3 374 aa17.34■□□□□ 0.37
VMA21-202ENST00000370361 EXOC4Q96A65 974 aa17.34■□□□□ 0.37
VMA21-202ENST00000370361 TRMT2BQ96GJ1 504 aaKnown RBP17.34■□□□□ 0.37
VMA21-202ENST00000370361 C7orf25Q9BPX7 421 aa17.34■□□□□ 0.37
VMA21-202ENST00000370361 HINFPQ9BQA5 517 aa17.34■□□□□ 0.37
VMA21-202ENST00000370361 LPIN3Q9BQK8 851 aa17.34■□□□□ 0.37
VMA21-202ENST00000370361 EPC1Q9H2F5 836 aa17.34■□□□□ 0.37
VMA21-202ENST00000370361 IL21Q9HBE4 155 aa17.34■□□□□ 0.37
VMA21-202ENST00000370361 INTS13Q9NVM9 706 aa17.34■□□□□ 0.37
VMA21-202ENST00000370361 DDX43Q9NXZ2 648 aaKnown RBP17.34■□□□□ 0.37
VMA21-202ENST00000370361 CFAP45Q9UL16 551 aa17.34■□□□□ 0.37
VMA21-202ENST00000370361 GABRDO14764 452 aa17.33■□□□□ 0.36
VMA21-202ENST00000370361 SOAT2O75908 522 aa17.33■□□□□ 0.36
VMA21-202ENST00000370361 PRPF6O94906 941 aaKnown RBP17.33■□□□□ 0.36
VMA21-202ENST00000370361 PAPSS2O95340 614 aaPredicted RBP17.33■□□□□ 0.36
VMA21-202ENST00000370361 KRT19P08727 400 aa17.33■□□□□ 0.36
VMA21-202ENST00000370361 FAM163BP0C2L3 166 aa17.33■□□□□ 0.36
VMA21-202ENST00000370361 AVPR1AP37288 418 aa17.33■□□□□ 0.36
VMA21-202ENST00000370361 ZNF268Q14587 947 aaPredicted RBP17.33■□□□□ 0.36
VMA21-202ENST00000370361 FAM26FQ5R3K3 315 aa17.33■□□□□ 0.36
VMA21-202ENST00000370361 C4orf50Q6ZRC1 276 aa17.33■□□□□ 0.36
VMA21-202ENST00000370361 HS2ST1Q7LGA3 356 aa17.33■□□□□ 0.36
VMA21-202ENST00000370361 ADGRF2Q8IZF7 708 aa17.33■□□□□ 0.36
VMA21-202ENST00000370361 CMTM8Q8IZV2 173 aa17.33■□□□□ 0.36
VMA21-202ENST00000370361 SPEM1Q8N4L4 309 aa17.33■□□□□ 0.36
VMA21-202ENST00000370361 CXorf38Q8TB03 319 aa17.33■□□□□ 0.36
VMA21-202ENST00000370361 ZNF507Q8TCN5 953 aa17.33■□□□□ 0.36
VMA21-202ENST00000370361 MRPS31Q92665 395 aaKnown RBP17.33■□□□□ 0.36
VMA21-202ENST00000370361 MTMR12Q9C0I1 747 aa17.33■□□□□ 0.36
VMA21-202ENST00000370361 IKZF4Q9H2S9 585 aa17.33■□□□□ 0.36
VMA21-202ENST00000370361 LMAN1LQ9HAT1 526 aa17.33■□□□□ 0.36
VMA21-202ENST00000370361 PDE11AQ9HCR9 933 aa17.33■□□□□ 0.36
VMA21-202ENST00000370361 FAM13BQ9NYF5 915 aa17.33■□□□□ 0.36
VMA21-202ENST00000370361 EHD2Q9NZN4 543 aa17.33■□□□□ 0.36
VMA21-202ENST00000370361 L1RE1Q9UN81 338 aa17.33■□□□□ 0.36
VMA21-202ENST00000370361 SNX9Q9Y5X1 595 aa17.33■□□□□ 0.36
VMA21-202ENST00000370361 EP300Q09472 2414 aaPredicted RBP17.32■□□□□ 0.36
VMA21-202ENST00000370361 OTOGLQ3ZCN5 2332 aa17.32■□□□□ 0.36
VMA21-202ENST00000370361 ZSCAN22P10073 491 aaPredicted RBP17.32■□□□□ 0.36
VMA21-202ENST00000370361 CHRNB1P11230 501 aa17.32■□□□□ 0.36
VMA21-202ENST00000370361 PFKLP17858 780 aa17.32■□□□□ 0.36
VMA21-202ENST00000370361 SDHBP21912 280 aa17.32■□□□□ 0.36
VMA21-202ENST00000370361 CCNE1P24864 410 aa17.32■□□□□ 0.36
VMA21-202ENST00000370361 CTHP32929 405 aa17.32■□□□□ 0.36
VMA21-202ENST00000370361 MAGEA11P43364 429 aa17.32■□□□□ 0.36
VMA21-202ENST00000370361 ID4P47928 161 aa17.32■□□□□ 0.36
VMA21-202ENST00000370361 PDE6CP51160 858 aa17.32■□□□□ 0.36
VMA21-202ENST00000370361 NLRP12P59046 1061 aa17.32■□□□□ 0.36
VMA21-202ENST00000370361 STXBP5Q5T5C0 1151 aa17.32■□□□□ 0.36
VMA21-202ENST00000370361 UNC13DQ70J99 1090 aa17.32■□□□□ 0.36
VMA21-202ENST00000370361 EPM2AIP1Q7L775 607 aaPredicted RBP17.32■□□□□ 0.36
VMA21-202ENST00000370361 FSIP1Q8NA03 581 aa17.32■□□□□ 0.36
VMA21-202ENST00000370361 DHX58Q96C10 678 aa17.32■□□□□ 0.36
VMA21-202ENST00000370361 RSPRY1Q96DX4 576 aa17.32■□□□□ 0.36
VMA21-202ENST00000370361 MYRFLQ96LU7 910 aa17.32■□□□□ 0.36
VMA21-202ENST00000370361 PCIF1Q9H4Z3 704 aa17.32■□□□□ 0.36
VMA21-202ENST00000370361 HSPBP1Q9NZL4 362 aa17.32■□□□□ 0.36
VMA21-202ENST00000370361 SIX4Q9UIU6 781 aa17.32■□□□□ 0.36
VMA21-202ENST00000370361 COL4A3Q01955 1670 aa17.32■□□□□ 0.36
VMA21-202ENST00000370361 ZNF292O60281 2723 aa17.32■□□□□ 0.36
VMA21-202ENST00000370361 DENND4CQ5VZ89 1909 aa17.31■□□□□ 0.36
VMA21-202ENST00000370361 NCANO14594 1321 aa17.31■□□□□ 0.36
VMA21-202ENST00000370361 PVALEFA0A1B0GWK0 134 aa17.31■□□□□ 0.36
VMA21-202ENST00000370361 GOLGA8IPA6NC78 632 aa17.31■□□□□ 0.36
VMA21-202ENST00000370361 GOLGA8JA6NMD2 632 aa17.31■□□□□ 0.36
VMA21-202ENST00000370361 SPECC1L-ADORA2AF8WAN1 911 aa17.31■□□□□ 0.36
VMA21-202ENST00000370361 NOL4O94818 638 aa17.31■□□□□ 0.36
VMA21-202ENST00000370361 F11P03951 625 aa17.31■□□□□ 0.36
VMA21-202ENST00000370361 HMGA1P17096 107 aaKnown RBP17.31■□□□□ 0.36
VMA21-202ENST00000370361 CNR2P34972 360 aa17.31■□□□□ 0.36
VMA21-202ENST00000370361 CXCL12P48061 93 aa17.31■□□□□ 0.36
VMA21-202ENST00000370361 ITPRIPL2Q3MIP1 535 aa17.31■□□□□ 0.36
VMA21-202ENST00000370361 VSTM1Q6UX27 236 aa17.31■□□□□ 0.36
VMA21-202ENST00000370361 LIMS2Q7Z4I7 341 aa17.31■□□□□ 0.36
VMA21-202ENST00000370361 SPATA2LQ8IUW3 424 aaPredicted RBP17.31■□□□□ 0.36
VMA21-202ENST00000370361 GOLGA5Q8TBA6 731 aa17.31■□□□□ 0.36
VMA21-202ENST00000370361 GIPC2Q8TF65 315 aa17.31■□□□□ 0.36
VMA21-202ENST00000370361 NOC3LQ8WTT2 800 aaKnown RBP17.31■□□□□ 0.36
VMA21-202ENST00000370361 HPDLQ96IR7 371 aa17.31■□□□□ 0.36
VMA21-202ENST00000370361 FNBP1Q96RU3 617 aa17.31■□□□□ 0.36
VMA21-202ENST00000370361 FGFBP2Q9BYJ0 223 aa17.31■□□□□ 0.36
VMA21-202ENST00000370361 NCDNQ9UBB6 729 aa17.31■□□□□ 0.36
VMA21-202ENST00000370361 CDH9Q9ULB4 789 aa17.31■□□□□ 0.36
VMA21-202ENST00000370361 KIF26AQ9ULI4 1882 aaPredicted RBP17.31■□□□□ 0.36
VMA21-202ENST00000370361 SPTBN4Q9H254 2564 aa17.31■□□□□ 0.36
VMA21-202ENST00000370361 WNT7BP56706 349 aa17.3■□□□□ 0.36
VMA21-202ENST00000370361 CYP4F8P98187 520 aa17.3■□□□□ 0.36
VMA21-202ENST00000370361 EHHADHQ08426 723 aa17.3■□□□□ 0.36
VMA21-202ENST00000370361 SNRNP35Q16560 246 aaKnown RBP17.3■□□□□ 0.36
VMA21-202ENST00000370361 BMT2Q1RMZ1 405 aa17.3■□□□□ 0.36
VMA21-202ENST00000370361 CC2D1AQ6P1N0 951 aaPredicted RBP17.3■□□□□ 0.36
VMA21-202ENST00000370361 FAM171BQ6P995 826 aa17.3■□□□□ 0.36
VMA21-202ENST00000370361 SHC4Q6S5L8 630 aa17.3■□□□□ 0.36
VMA21-202ENST00000370361 MON1AQ86VX9 555 aa17.3■□□□□ 0.36
VMA21-202ENST00000370361 C12orf56Q8IXR9 622 aa17.3■□□□□ 0.36
VMA21-202ENST00000370361 ZSWIM2Q8NEG5 633 aa17.3■□□□□ 0.36
VMA21-202ENST00000370361 PKMYT1Q99640 499 aa17.3■□□□□ 0.36
VMA21-202ENST00000370361 PI4K2AQ9BTU6 479 aa17.3■□□□□ 0.36
VMA21-202ENST00000370361 SLC46A2Q9BY10 475 aa17.3■□□□□ 0.36
VMA21-202ENST00000370361 AGPAT3Q9NRZ7 376 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms