RNA–Protein interactions for RNA: ENST00000369746.2

UBE3D-202, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 2,740 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-202ENST00000369746 PBX4Q9BYU1 374 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 PARVBQ9HBI1 364 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 PPT2Q9UMR5 302 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 SATB2Q9UPW6 733 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 ATP11BQ9Y2G3 1177 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 R3HDM2Q9Y2K5 976 aaKnown RBP5.36□□□□□ -1.55
UBE3D-202ENST00000369746 TCHHQ07283 1943 aa5.36□□□□□ -1.55
UBE3D-202ENST00000369746 INO80B-WBP1J3KQ70 363 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 FRS3O43559 492 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 TLR5O60602 858 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 DKC1O60832 514 aaKnown RBP eCLIP5.35□□□□□ -1.55
UBE3D-202ENST00000369746 S100A6P06703 90 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 PDHBP11177 359 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 ZNF3P17036 446 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 MPSTP25325 297 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 BASP1P80723 227 aaKnown RBP5.35□□□□□ -1.55
UBE3D-202ENST00000369746 MXRA7P84157 204 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 CLUL1Q15846 466 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 RGS9BPQ6ZS82 235 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 USP51Q70EK9 711 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 UBE3BQ7Z3V4 1068 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 ITPRIPQ8IWB1 547 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 CCDC33Q8N5R6 958 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 SCAIQ8N9R8 606 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 LRRN4CLQ8ND94 238 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 HDAC2Q92769 488 aaKnown RBP5.35□□□□□ -1.55
UBE3D-202ENST00000369746 NR1H4Q96RI1 486 aaPredicted RBP5.35□□□□□ -1.55
UBE3D-202ENST00000369746 TCF12Q99081 682 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 NDNQ99608 321 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 EPN3Q9H201 632 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 KAT14Q9H8E8 782 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 NOD2Q9HC29 1040 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 IL1RAPL1Q9NZN1 696 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 ZSWIM5Q9P217 1185 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 SUCLA2Q9P2R7 463 aaPredicted RBP5.35□□□□□ -1.55
UBE3D-202ENST00000369746 EXOC7Q9UPT5 735 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 PCDHGB6Q9Y5F9 930 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 COMMD3-BMI1R4GMX3 469 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 PLXNA1Q9UIW2 1896 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 SOBPA7XYQ1 873 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 BECN2A8MW95 431 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 ANKRD65E5RJM6 399 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 SGK1O00141 431 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 GFRA3O60609 400 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 GADD45BO75293 160 aaPredicted RBP5.35□□□□□ -1.55
UBE3D-202ENST00000369746 IDH1O75874 414 aaKnown RBP5.35□□□□□ -1.55
UBE3D-202ENST00000369746 SLC25A27O95847 323 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 LTA4HP09960 611 aaKnown RBP5.35□□□□□ -1.55
UBE3D-202ENST00000369746 PF4V1P10720 104 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 PLCG2P16885 1265 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 GDI1P31150 447 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 OR1G1P47890 313 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 DIO1P49895 249 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 CUL2Q13617 745 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 DPYSQ14117 519 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 ZNF268Q14587 947 aaPredicted RBP5.35□□□□□ -1.55
UBE3D-202ENST00000369746 NDUFA5Q16718 116 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 ZNF792Q3KQV3 632 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 RPS26P11Q5JNZ5 115 aaPredicted RBP5.35□□□□□ -1.55
UBE3D-202ENST00000369746 PCNX4Q63HM2 1172 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 WDR73Q6P4I2 378 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 MEX3BQ6ZN04 569 aaKnown RBP5.35□□□□□ -1.55
UBE3D-202ENST00000369746 CCDC121Q6ZUS5 278 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 GALNT7Q86SF2 657 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 LRRC71Q8N4P6 559 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 FBXL6Q8N531 539 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 PDCD7Q8N8D1 485 aaKnown RBP5.35□□□□□ -1.55
UBE3D-202ENST00000369746 PRSS33Q8NF86 280 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 Q8NFD4 153 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 DNAJB8Q8NHS0 232 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 NEDD1Q8NHV4 660 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 C1orf216Q8TAB5 229 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 KIFAP3Q92845 792 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 EDC3Q96F86 508 aaKnown RBP5.35□□□□□ -1.55
UBE3D-202ENST00000369746 CATSPER2Q96P56 530 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 HAPLN3Q96S86 360 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 HNRNPABQ99729 332 aaKnown RBP5.35□□□□□ -1.55
UBE3D-202ENST00000369746 PRKD2Q9BZL6 878 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 NUP62CLQ9H1M0 184 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 MYLK2Q9H1R3 596 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 CLSTN2Q9H4D0 955 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 PREBQ9HCU5 417 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 OLA1Q9NTK5 396 aaKnown RBP5.35□□□□□ -1.55
UBE3D-202ENST00000369746 RMND1Q9NWS8 449 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 AKAP7Q9P0M2 348 aaPredicted RBP5.35□□□□□ -1.55
UBE3D-202ENST00000369746 ADGRE2Q9UHX3 823 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 TRAF3IP3Q9Y228 551 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 FADS3Q9Y5Q0 445 aa5.35□□□□□ -1.55
UBE3D-202ENST00000369746 A0A0G2JPF8 293 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 TRIM43BA6NCK2 446 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 PRR23AA6NEV1 266 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 HNRNPCL3B7ZW38 293 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 SMAD7O15105 426 aaKnown RBP5.34□□□□□ -1.55
UBE3D-202ENST00000369746 DOK2O60496 412 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 B4GALT4O60513 344 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 BCAR3O75815 825 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 URI1O94763 535 aaPredicted RBP5.34□□□□□ -1.55
UBE3D-202ENST00000369746 ANP32DO95626 131 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 HMOX1P09601 288 aa5.34□□□□□ -1.55
UBE3D-202ENST00000369746 HNRNPCL4P0DMR1 293 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms