RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 MICALL1Q8N3F8 863 aa9.45□□□□□ -0.9
TPM3-213ENST00000368545 ZNF397Q8NF99 534 aaPredicted RBP9.45□□□□□ -0.9
TPM3-213ENST00000368545 TCP11Q8WWU5 503 aa9.45□□□□□ -0.9
TPM3-213ENST00000368545 COPS5Q92905 334 aa9.45□□□□□ -0.9
TPM3-213ENST00000368545 CDC6Q99741 560 aa9.45□□□□□ -0.9
TPM3-213ENST00000368545 TTYH3Q9C0H2 523 aa9.45□□□□□ -0.9
TPM3-213ENST00000368545 ADAM19Q9H013 955 aa9.45□□□□□ -0.9
TPM3-213ENST00000368545 UBE2ZQ9H832 354 aaPredicted RBP9.45□□□□□ -0.9
TPM3-213ENST00000368545 TRIM33Q9UPN9 1127 aa9.45□□□□□ -0.9
TPM3-213ENST00000368545 PHLPP2Q6ZVD8 1323 aa9.45□□□□□ -0.9
TPM3-213ENST00000368545 A0A0U1RQG5 324 aaPredicted RBP9.44□□□□□ -0.9
TPM3-213ENST00000368545 A0A1W2PQ45 241 aaPredicted RBP9.44□□□□□ -0.9
TPM3-213ENST00000368545 A0A1W2PQY0 241 aa9.44□□□□□ -0.9
TPM3-213ENST00000368545 DENND3A2RUS2 1198 aa9.44□□□□□ -0.9
TPM3-213ENST00000368545 TNFRSF10CO14798 259 aa9.44□□□□□ -0.9
TPM3-213ENST00000368545 KRT9P35527 623 aa9.44□□□□□ -0.9
TPM3-213ENST00000368545 ARL2P36404 184 aa9.44□□□□□ -0.9
TPM3-213ENST00000368545 IKBKEQ14164 716 aa9.44□□□□□ -0.9
TPM3-213ENST00000368545 HSP90AA2PQ14568 343 aaPredicted RBP9.44□□□□□ -0.9
TPM3-213ENST00000368545 PLCB4Q15147 1175 aa9.44□□□□□ -0.9
TPM3-213ENST00000368545 CCL14Q16627 93 aa9.44□□□□□ -0.9
TPM3-213ENST00000368545 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.44□□□□□ -0.91e-17■□□□□ 9.7
TPM3-213ENST00000368545 CDCP2Q5VXM1 449 aa9.44□□□□□ -0.9
TPM3-213ENST00000368545 KSR1Q8IVT5 923 aa9.44□□□□□ -0.9
TPM3-213ENST00000368545 PRSS33Q8NF86 280 aa9.44□□□□□ -0.9
TPM3-213ENST00000368545 EDEM3Q9BZQ6 932 aa9.44□□□□□ -0.9
TPM3-213ENST00000368545 XPNPEP3Q9NQH7 507 aa9.44□□□□□ -0.9
TPM3-213ENST00000368545 STARD7Q9NQZ5 370 aa9.44□□□□□ -0.9
TPM3-213ENST00000368545 ZHX1Q9UKY1 873 aaPredicted RBP9.44□□□□□ -0.9
TPM3-213ENST00000368545 ZNF215Q9UL58 517 aaPredicted RBP9.44□□□□□ -0.9
TPM3-213ENST00000368545 SIK3Q9Y2K2 1263 aa9.44□□□□□ -0.9
TPM3-213ENST00000368545 TTC26A0AVF1 554 aa9.44□□□□□ -0.9
TPM3-213ENST00000368545 GTPBP10A4D1E9 387 aaKnown RBP9.44□□□□□ -0.9
TPM3-213ENST00000368545 EXOC3O60645 756 aa9.44□□□□□ -0.9
TPM3-213ENST00000368545 PPFIA4O75335 1185 aa9.44□□□□□ -0.9
TPM3-213ENST00000368545 AFPP02771 609 aaKnown RBP9.44□□□□□ -0.9
TPM3-213ENST00000368545 LGALS2P05162 132 aa9.44□□□□□ -0.9
TPM3-213ENST00000368545 CPB1P15086 417 aa9.44□□□□□ -0.9
TPM3-213ENST00000368545 MARK3P27448 753 aa9.44□□□□□ -0.9
TPM3-213ENST00000368545 RAB27AP51159 221 aa9.44□□□□□ -0.9
TPM3-213ENST00000368545 ZBED6P86452 979 aa9.44□□□□□ -0.9
TPM3-213ENST00000368545 MXD4Q14582 209 aaPredicted RBP9.44□□□□□ -0.9
TPM3-213ENST00000368545 NEK11Q8NG66 645 aa9.44□□□□□ -0.9
TPM3-213ENST00000368545 OR8K1Q8NGG5 319 aa9.44□□□□□ -0.9
TPM3-213ENST00000368545 SEMA4AQ9H3S1 761 aa9.44□□□□□ -0.9
TPM3-213ENST00000368545 COL1A2P08123 1366 aa9.44□□□□□ -0.9
TPM3-213ENST00000368545 RASGRP1O95267 797 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 ECEL1O95672 775 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 AKR1A1P14550 325 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 CASP4P49662 377 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 CYP2J2P51589 502 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 GOLGA8FQ08AF8 430 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 GOLGA8DPQ0D2H9 430 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 STRN3Q13033 797 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 DCAF17Q5H9S7 520 aaPredicted RBP9.43□□□□□ -0.9
TPM3-213ENST00000368545 ZNF484Q5JVG2 852 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 TCERG1LQ5VWI1 586 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 CYP26C1Q6V0L0 522 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 LHFPL2Q6ZUX7 228 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 INTS8Q75QN2 995 aaKnown RBP9.43□□□□□ -0.9
TPM3-213ENST00000368545 FAM35AQ86V20 835 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 TMTC1Q8IUR5 882 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 ADHFE1Q8IWW8 467 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 XXYLT1Q8NBI6 393 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 OR6J1Q8NGC5 347 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 DEPTORQ8TB45 409 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 PSPC1Q8WXF1 523 aaKnown RBP9.43□□□□□ -0.9
TPM3-213ENST00000368545 SLC35C1Q96A29 364 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 TMEM143Q96AN5 459 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 BORCS6Q96GS4 357 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 GLT1D1Q96MS3 346 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 ZNHIT6Q9NWK9 470 aaKnown RBP9.43□□□□□ -0.9
TPM3-213ENST00000368545 KLHL3Q9UH77 587 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 YBX2Q9Y2T7 364 aaKnown RBP9.43□□□□□ -0.9
TPM3-213ENST00000368545 KAT6AQ92794 2004 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 ADGRA3Q8IWK6 1321 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 IGKV6-21A0A0C4DH24 114 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.43□□□□□ -0.9
TPM3-213ENST00000368545 LRRIQ4A6NIV6 560 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 HNRNPDLO14979 420 aaKnown RBP9.43□□□□□ -0.9
TPM3-213ENST00000368545 KIAA0391O15091 583 aaKnown RBP9.43□□□□□ -0.9
TPM3-213ENST00000368545 ZSCAN12O43309 604 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 PQBP1O60828 265 aaKnown RBP9.43□□□□□ -0.9
TPM3-213ENST00000368545 KRT13P13646 458 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 GLRA2P23416 452 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 POLR2BP30876 1174 aaKnown RBP9.43□□□□□ -0.9
TPM3-213ENST00000368545 CDK7P50613 346 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 ENPEPQ07075 957 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 BFSP1Q12934 665 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 DGKDQ16760 1214 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 SV2CQ496J9 727 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 C14orf80Q86SX3 495 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 CCAR2Q8N163 923 aaKnown RBP9.43□□□□□ -0.9
TPM3-213ENST00000368545 RIN3Q8TB24 985 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 AFG1LQ8WV93 481 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 EDAQ92838 391 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 SAMD11Q96NU1 681 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 KIFC3Q9BVG8 833 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 MMRN2Q9H8L6 949 aa9.43□□□□□ -0.9
TPM3-213ENST00000368545 HSPBP1Q9NZL4 362 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms