RNA–Protein interactions for RNA: ENST00000368439.5

CKS1B-203, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 1 (best) BASIC

Gene CKS1B, Length 912 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-203ENST00000368439 ELSPBP1Q96BH3 223 aa20.3■□□□□ 0.84
CKS1B-203ENST00000368439 CCDC34Q96HJ3 373 aa20.3■□□□□ 0.84
CKS1B-203ENST00000368439 GSDMAQ96QA5 445 aa20.3■□□□□ 0.84
CKS1B-203ENST00000368439 MRPL45Q9BRJ2 306 aaKnown RBP20.3■□□□□ 0.84
CKS1B-203ENST00000368439 PI4K2AQ9BTU6 479 aa20.3■□□□□ 0.84
CKS1B-203ENST00000368439 MKNK1Q9BUB5 465 aa20.3■□□□□ 0.84
CKS1B-203ENST00000368439 ABCB6Q9NP58 842 aa20.3■□□□□ 0.84
CKS1B-203ENST00000368439 CRTAC1Q9NQ79 661 aa20.3■□□□□ 0.84
CKS1B-203ENST00000368439 FBXL21Q9UKT6 434 aa20.3■□□□□ 0.84
CKS1B-203ENST00000368439 PCDHA5Q9Y5H7 936 aa20.3■□□□□ 0.84
CKS1B-203ENST00000368439 COL4A2P08572 1712 aa20.3■□□□□ 0.84
CKS1B-203ENST00000368439 NCANO14594 1321 aa20.29■□□□□ 0.84
CKS1B-203ENST00000368439 GADD45BO75293 160 aaPredicted RBP20.29■□□□□ 0.84
CKS1B-203ENST00000368439 HMGA1P17096 107 aaKnown RBP20.29■□□□□ 0.84
CKS1B-203ENST00000368439 NR2F2P24468 414 aa20.29■□□□□ 0.84
CKS1B-203ENST00000368439 WDR72Q3MJ13 1102 aa20.29■□□□□ 0.84
CKS1B-203ENST00000368439 ZACNQ401N2 412 aa20.29■□□□□ 0.84
CKS1B-203ENST00000368439 CFAP221Q4G0U5 840 aa20.29■□□□□ 0.84
CKS1B-203ENST00000368439 COBLL1Q53SF7 1204 aa20.29■□□□□ 0.84
CKS1B-203ENST00000368439 STXBP5Q5T5C0 1151 aa20.29■□□□□ 0.84
CKS1B-203ENST00000368439 ASTLQ6HA08 431 aaPredicted RBP20.29■□□□□ 0.84
CKS1B-203ENST00000368439 ITIH5Q86UX2 942 aa20.29■□□□□ 0.84
CKS1B-203ENST00000368439 ELOA2Q8IYF1 753 aaPredicted RBP20.29■□□□□ 0.84
CKS1B-203ENST00000368439 PRSS33Q8NF86 280 aa20.29■□□□□ 0.84
CKS1B-203ENST00000368439 GIPC2Q8TF65 315 aa20.29■□□□□ 0.84
CKS1B-203ENST00000368439 SMARCD2Q92925 531 aa20.29■□□□□ 0.84
CKS1B-203ENST00000368439 MMS19Q96T76 1030 aa20.29■□□□□ 0.84
CKS1B-203ENST00000368439 SYT15Q9BQS2 421 aa20.29■□□□□ 0.84
CKS1B-203ENST00000368439 TRPV4Q9HBA0 871 aa20.29■□□□□ 0.84
CKS1B-203ENST00000368439 CDH9Q9ULB4 789 aa20.29■□□□□ 0.84
CKS1B-203ENST00000368439 CA14Q9ULX7 337 aa20.29■□□□□ 0.84
CKS1B-203ENST00000368439 FRMD4BQ9Y2L6 1034 aa20.29■□□□□ 0.84
CKS1B-203ENST00000368439 IKBKBO14920 756 aa20.28■□□□□ 0.84
CKS1B-203ENST00000368439 CYP2F1P24903 491 aa20.28■□□□□ 0.84
CKS1B-203ENST00000368439 PRCPP42785 496 aa20.28■□□□□ 0.84
CKS1B-203ENST00000368439 CLCN5P51795 746 aa20.28■□□□□ 0.84
CKS1B-203ENST00000368439 TRPC3Q13507 836 aa20.28■□□□□ 0.84
CKS1B-203ENST00000368439 ZNF658Q5TYW1 1059 aaPredicted RBP20.28■□□□□ 0.84
CKS1B-203ENST00000368439 ZSCAN18Q8TBC5 510 aaPredicted RBP20.28■□□□□ 0.84
CKS1B-203ENST00000368439 SYAP1Q96A49 352 aaPredicted RBP20.28■□□□□ 0.84
CKS1B-203ENST00000368439 GPR88Q9GZN0 384 aa20.28■□□□□ 0.84
CKS1B-203ENST00000368439 MFSD1Q9H3U5 465 aa20.28■□□□□ 0.84
CKS1B-203ENST00000368439 RMND1Q9NWS8 449 aa20.28■□□□□ 0.84
CKS1B-203ENST00000368439 PI15O43692 258 aa20.27■□□□□ 0.84
CKS1B-203ENST00000368439 PHACTR2O75167 634 aa20.27■□□□□ 0.84
CKS1B-203ENST00000368439 PDGFRBP09619 1106 aa20.27■□□□□ 0.84
CKS1B-203ENST00000368439 AOC1P19801 751 aa20.27■□□□□ 0.84
CKS1B-203ENST00000368439 GABRR2P28476 465 aa20.27■□□□□ 0.84
CKS1B-203ENST00000368439 PLA2G5P39877 138 aa20.27■□□□□ 0.84
CKS1B-203ENST00000368439 PSMC1P62191 440 aaKnown RBP20.27■□□□□ 0.84
CKS1B-203ENST00000368439 BIRC3Q13489 604 aa20.27■□□□□ 0.84
CKS1B-203ENST00000368439 NCOA4Q13772 614 aa20.27■□□□□ 0.84
CKS1B-203ENST00000368439 VEPH1Q14D04 833 aa20.27■□□□□ 0.84
CKS1B-203ENST00000368439 EDRF1Q3B7T1 1238 aa20.27■□□□□ 0.84
CKS1B-203ENST00000368439 SV2AQ7L0J3 742 aa20.27■□□□□ 0.84
CKS1B-203ENST00000368439 TMEM150AQ86TG1 271 aa20.27■□□□□ 0.84
CKS1B-203ENST00000368439 STKLD1Q8NE28 680 aa20.27■□□□□ 0.84
CKS1B-203ENST00000368439 FAM200AQ8TCP9 573 aa20.27■□□□□ 0.84
CKS1B-203ENST00000368439 ELMO3Q96BJ8 720 aa20.27■□□□□ 0.84
CKS1B-203ENST00000368439 FUBP3Q96I24 572 aaKnown RBP eCLIP20.27■□□□□ 0.84
CKS1B-203ENST00000368439 ZFP14Q9HCL3 533 aa20.27■□□□□ 0.84
CKS1B-203ENST00000368439 ARHGEF3Q9NR81 526 aa20.27■□□□□ 0.84
CKS1B-203ENST00000368439 ANAPC1Q9H1A4 1944 aa20.26■□□□□ 0.83
CKS1B-203ENST00000368439 FGF19O95750 216 aa20.26■□□□□ 0.83
CKS1B-203ENST00000368439 GNL1P36915 607 aaPredicted RBP20.26■□□□□ 0.83
CKS1B-203ENST00000368439 VIPR2P41587 438 aa20.26■□□□□ 0.83
CKS1B-203ENST00000368439 VAMP7P51809 220 aa20.26■□□□□ 0.83
CKS1B-203ENST00000368439 TNNC1P63316 161 aa20.26■□□□□ 0.83
CKS1B-203ENST00000368439 ENPEPQ07075 957 aa20.26■□□□□ 0.83
CKS1B-203ENST00000368439 TCF15Q12870 199 aa20.26■□□□□ 0.83
CKS1B-203ENST00000368439 ADAM9Q13443 819 aa20.26■□□□□ 0.83
CKS1B-203ENST00000368439 DDR2Q16832 855 aa20.26■□□□□ 0.83
CKS1B-203ENST00000368439 SDHAF4Q5VUM1 108 aa20.26■□□□□ 0.83
CKS1B-203ENST00000368439 VITQ6UXI7 678 aa20.26■□□□□ 0.83
CKS1B-203ENST00000368439 FLCNQ8NFG4 579 aa20.26■□□□□ 0.83
CKS1B-203ENST00000368439 MYLPFQ96A32 169 aa20.26■□□□□ 0.83
CKS1B-203ENST00000368439 RSPRY1Q96DX4 576 aa20.26■□□□□ 0.83
CKS1B-203ENST00000368439 ATXN3LQ9H3M9 355 aa20.26■□□□□ 0.83
CKS1B-203ENST00000368439 NXF1Q9UBU9 619 aaKnown RBP20.26■□□□□ 0.83
CKS1B-203ENST00000368439 SMC2O95347 1197 aa20.25■□□□□ 0.83
CKS1B-203ENST00000368439 F11P03951 625 aa20.25■□□□□ 0.83
CKS1B-203ENST00000368439 RPL13P26373 211 aaKnown RBP20.25■□□□□ 0.83
CKS1B-203ENST00000368439 PSMC2P35998 433 aaKnown RBP20.25■□□□□ 0.83
CKS1B-203ENST00000368439 MAGEA11P43364 429 aa20.25■□□□□ 0.83
CKS1B-203ENST00000368439 NUBP1P53384 320 aa20.25■□□□□ 0.83
CKS1B-203ENST00000368439 PPP3CAQ08209 521 aa20.25■□□□□ 0.83
CKS1B-203ENST00000368439 ZNF699Q32M78 642 aa20.25■□□□□ 0.83
CKS1B-203ENST00000368439 PHLDB3Q6NSJ2 640 aa20.25■□□□□ 0.83
CKS1B-203ENST00000368439 INTS8Q75QN2 995 aaKnown RBP20.25■□□□□ 0.83
CKS1B-203ENST00000368439 SPATA2LQ8IUW3 424 aaPredicted RBP20.25■□□□□ 0.83
CKS1B-203ENST00000368439 ZC3H3Q8IXZ2 948 aaKnown RBP20.25■□□□□ 0.83
CKS1B-203ENST00000368439 FAM186BQ8IYM0 893 aa20.25■□□□□ 0.83
CKS1B-203ENST00000368439 OR6B3Q8NGW1 331 aa20.25■□□□□ 0.83
CKS1B-203ENST00000368439 MYCBPAPQ8TBZ2 947 aa20.25■□□□□ 0.83
CKS1B-203ENST00000368439 SMARCE1Q969G3 411 aa20.25■□□□□ 0.83
CKS1B-203ENST00000368439 SDCBP2Q9H190 292 aa20.25■□□□□ 0.83
CKS1B-203ENST00000368439 SNX25Q9H3E2 840 aa20.25■□□□□ 0.83
CKS1B-203ENST00000368439 DPEP3Q9H4B8 488 aa20.25■□□□□ 0.83
CKS1B-203ENST00000368439 SMYD3Q9H7B4 428 aa20.25■□□□□ 0.83
CKS1B-203ENST00000368439 TICRRQ7Z2Z1 1910 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms