RNA–Protein interactions for RNA: ENST00000368291.6

ECHDC1-203, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,354 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-203ENST00000368291 CBWD3Q5JTY5 395 aa23.99■■□□□ 1.43
ECHDC1-203ENST00000368291 PRSS36Q5K4E3 855 aa23.99■■□□□ 1.43
ECHDC1-203ENST00000368291 CBWD5Q5RIA9 395 aa23.99■■□□□ 1.43
ECHDC1-203ENST00000368291 TCERG1LQ5VWI1 586 aa23.99■■□□□ 1.43
ECHDC1-203ENST00000368291 SCARA5Q6ZMJ2 495 aa23.99■■□□□ 1.43
ECHDC1-203ENST00000368291 FRMD5Q7Z6J6 570 aa23.99■■□□□ 1.43
ECHDC1-203ENST00000368291 MLKLQ8NB16 471 aa23.99■■□□□ 1.43
ECHDC1-203ENST00000368291 OR6B3Q8NGW1 331 aa23.99■■□□□ 1.43
ECHDC1-203ENST00000368291 LRRC3Q9BY71 257 aa23.99■■□□□ 1.43
ECHDC1-203ENST00000368291 SNX25Q9H3E2 840 aa23.99■■□□□ 1.43
ECHDC1-203ENST00000368291 UTP3Q9NQZ2 479 aaKnown RBP eCLIP23.99■■□□□ 1.432e-6■■■■■ 96.1
ECHDC1-203ENST00000368291 EPS15L1Q9UBC2 864 aa23.99■■□□□ 1.43
ECHDC1-203ENST00000368291 LIMD1Q9UGP4 676 aa23.99■■□□□ 1.43
ECHDC1-203ENST00000368291 RWDD2AQ9UIY3 292 aa23.99■■□□□ 1.43
ECHDC1-203ENST00000368291 TRIOO75962 3097 aa23.98■■□□□ 1.43
ECHDC1-203ENST00000368291 ASPAP45381 313 aa23.98■■□□□ 1.43
ECHDC1-203ENST00000368291 ALDH1A3P47895 512 aa23.98■■□□□ 1.43
ECHDC1-203ENST00000368291 TUFMP49411 452 aaKnown RBP23.98■■□□□ 1.43
ECHDC1-203ENST00000368291 MXI1P50539 228 aa23.98■■□□□ 1.43
ECHDC1-203ENST00000368291 EPHA5P54756 1037 aa23.98■■□□□ 1.43
ECHDC1-203ENST00000368291 PLD1Q13393 1074 aa23.98■■□□□ 1.43
ECHDC1-203ENST00000368291 DPCR1Q3MIW9 517 aa23.98■■□□□ 1.43
ECHDC1-203ENST00000368291 RBM43Q6ZSC3 357 aaKnown RBP23.98■■□□□ 1.43
ECHDC1-203ENST00000368291 ZNF512Q96ME7 567 aaPredicted RBP23.98■■□□□ 1.43
ECHDC1-203ENST00000368291 SEPT5Q99719 369 aaPredicted RBP23.98■■□□□ 1.43
ECHDC1-203ENST00000368291 LPIN3Q9BQK8 851 aa23.98■■□□□ 1.43
ECHDC1-203ENST00000368291 SRRTQ9BXP5 876 aaKnown RBP23.98■■□□□ 1.43
ECHDC1-203ENST00000368291 DPEP3Q9H4B8 488 aa23.98■■□□□ 1.43
ECHDC1-203ENST00000368291 METTL14Q9HCE5 456 aaKnown RBP23.98■■□□□ 1.43
ECHDC1-203ENST00000368291 ASGR2P07307 311 aa23.97■■□□□ 1.43
ECHDC1-203ENST00000368291 LAMP2P13473 410 aa23.97■■□□□ 1.43
ECHDC1-203ENST00000368291 NOP14P78316 857 aaKnown RBP23.97■■□□□ 1.43
ECHDC1-203ENST00000368291 TMC8Q8IU68 726 aa23.97■■□□□ 1.43
ECHDC1-203ENST00000368291 ELMOD1Q8N336 334 aa23.97■■□□□ 1.43
ECHDC1-203ENST00000368291 FGF13Q92913 245 aa23.97■■□□□ 1.43
ECHDC1-203ENST00000368291 TCEAL4Q96EI5 215 aa23.97■■□□□ 1.43
ECHDC1-203ENST00000368291 BCO2Q9BYV7 579 aa23.97■■□□□ 1.43
ECHDC1-203ENST00000368291 ABCB6Q9NP58 842 aa23.97■■□□□ 1.43
ECHDC1-203ENST00000368291 COQ4Q9Y3A0 265 aa23.97■■□□□ 1.43
ECHDC1-203ENST00000368291 MYH10P35580 1976 aa23.97■■□□□ 1.43
ECHDC1-203ENST00000368291 ZNF638Q14966 1978 aaKnown RBP23.97■■□□□ 1.43
ECHDC1-203ENST00000368291 DCXO43602 365 aa23.96■■□□□ 1.43
ECHDC1-203ENST00000368291 STX10O60499 249 aa23.96■■□□□ 1.43
ECHDC1-203ENST00000368291 MOSPD3O75425 235 aa23.96■■□□□ 1.43
ECHDC1-203ENST00000368291 CYP2F1P24903 491 aa23.96■■□□□ 1.43
ECHDC1-203ENST00000368291 GPR15P49685 360 aa23.96■■□□□ 1.43
ECHDC1-203ENST00000368291 EPHB3P54753 998 aa23.96■■□□□ 1.43
ECHDC1-203ENST00000368291 MARSP56192 900 aaKnown RBP23.96■■□□□ 1.43
ECHDC1-203ENST00000368291 NLRP12P59046 1061 aa23.96■■□□□ 1.43
ECHDC1-203ENST00000368291 CFAP221Q4G0U5 840 aa23.96■■□□□ 1.43
ECHDC1-203ENST00000368291 CCDC40Q4G0X9 1142 aa23.96■■□□□ 1.43
ECHDC1-203ENST00000368291 IQCEQ6IPM2 695 aa23.96■■□□□ 1.43
ECHDC1-203ENST00000368291 NPAS3Q8IXF0 933 aa23.96■■□□□ 1.43
ECHDC1-203ENST00000368291 FBXL13Q8NEE6 735 aa23.96■■□□□ 1.43
ECHDC1-203ENST00000368291 ING5Q8WYH8 240 aa23.96■■□□□ 1.43
ECHDC1-203ENST00000368291 PSMG2Q969U7 264 aa23.96■■□□□ 1.43
ECHDC1-203ENST00000368291 CDH7Q9ULB5 785 aa23.96■■□□□ 1.43
ECHDC1-203ENST00000368291 MRPS23Q9Y3D9 190 aaKnown RBP23.96■■□□□ 1.43
ECHDC1-203ENST00000368291 TECTAO75443 2155 aa23.96■■□□□ 1.43
ECHDC1-203ENST00000368291 A8MXQ7 604 aa23.95■■□□□ 1.42
ECHDC1-203ENST00000368291 CLSTN1O94985 981 aa23.95■■□□□ 1.42
ECHDC1-203ENST00000368291 CEBPBP17676 345 aa23.95■■□□□ 1.42
ECHDC1-203ENST00000368291 PTPN1P18031 435 aaKnown RBP23.95■■□□□ 1.42
ECHDC1-203ENST00000368291 PTPN21Q16825 1174 aa23.95■■□□□ 1.42
ECHDC1-203ENST00000368291 DNAJB7Q7Z6W7 309 aaPredicted RBP23.95■■□□□ 1.42
ECHDC1-203ENST00000368291 MYCBPAPQ8TBZ2 947 aa23.95■■□□□ 1.42
ECHDC1-203ENST00000368291 MYLPFQ96A32 169 aa23.95■■□□□ 1.42
ECHDC1-203ENST00000368291 PCED1BQ96HM7 432 aa23.95■■□□□ 1.42
ECHDC1-203ENST00000368291 FUBP3Q96I24 572 aaKnown RBP eCLIP23.95■■□□□ 1.42
ECHDC1-203ENST00000368291 ZNF334Q9HCZ1 680 aaPredicted RBP23.95■■□□□ 1.42
ECHDC1-203ENST00000368291 RAB20Q9NX57 234 aa23.95■■□□□ 1.42
ECHDC1-203ENST00000368291 ASB3Q9Y575 518 aa23.95■■□□□ 1.42
ECHDC1-203ENST00000368291 P4HA1P13674 534 aa23.94■■□□□ 1.42
ECHDC1-203ENST00000368291 PDZD4Q76G19 769 aaPredicted RBP23.94■■□□□ 1.42
ECHDC1-203ENST00000368291 SPATA2LQ8IUW3 424 aaPredicted RBP23.94■■□□□ 1.42
ECHDC1-203ENST00000368291 TRIM59Q8IWR1 403 aa23.94■■□□□ 1.42
ECHDC1-203ENST00000368291 GIPC2Q8TF65 315 aa23.94■■□□□ 1.42
ECHDC1-203ENST00000368291 IMPG2Q9BZV3 1241 aa23.94■■□□□ 1.42
ECHDC1-203ENST00000368291 KCNK12Q9HB15 430 aa23.94■■□□□ 1.42
ECHDC1-203ENST00000368291 HMGXB4Q9UGU5 601 aa23.94■■□□□ 1.42
ECHDC1-203ENST00000368291 ZFP37Q9Y6Q3 630 aaPredicted RBP23.94■■□□□ 1.42
ECHDC1-203ENST00000368291 ANAPC1Q9H1A4 1944 aa23.94■■□□□ 1.42
ECHDC1-203ENST00000368291 MYL4P12829 197 aa23.93■■□□□ 1.42
ECHDC1-203ENST00000368291 ALADP13716 330 aa23.93■■□□□ 1.42
ECHDC1-203ENST00000368291 FMO5P49326 533 aa23.93■■□□□ 1.42
ECHDC1-203ENST00000368291 MAPRE1Q15691 268 aaKnown RBP23.93■■□□□ 1.42
ECHDC1-203ENST00000368291 MDH1BQ5I0G3 518 aa23.93■■□□□ 1.42
ECHDC1-203ENST00000368291 CYP4A22Q5TCH4 519 aa23.93■■□□□ 1.42
ECHDC1-203ENST00000368291 SDHAF4Q5VUM1 108 aa23.93■■□□□ 1.42
ECHDC1-203ENST00000368291 LEMD2Q8NC56 503 aa23.93■■□□□ 1.42
ECHDC1-203ENST00000368291 B3GALNT2Q8NCR0 500 aa23.93■■□□□ 1.42
ECHDC1-203ENST00000368291 STKLD1Q8NE28 680 aa23.93■■□□□ 1.42
ECHDC1-203ENST00000368291 GPR152Q8TDT2 470 aa23.93■■□□□ 1.42
ECHDC1-203ENST00000368291 RSAD2Q8WXG1 361 aa23.93■■□□□ 1.42
ECHDC1-203ENST00000368291 NIF3L1Q9GZT8 377 aa23.93■■□□□ 1.42
ECHDC1-203ENST00000368291 ASAH2Q9NR71 780 aa23.93■■□□□ 1.42
ECHDC1-203ENST00000368291 ANHXE9PGG2 379 aa23.92■■□□□ 1.42
ECHDC1-203ENST00000368291 ZNF197O14709 1029 aa23.92■■□□□ 1.42
ECHDC1-203ENST00000368291 PMM2O15305 246 aa23.92■■□□□ 1.42
ECHDC1-203ENST00000368291 MICAL2O94851 1124 aa23.92■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms