RNA–Protein interactions for RNA: ENST00000368019.5

USF1-201, Transcript of upstream transcription factor 1, humanhuman

TSL 5 BASIC

Gene USF1, Length 998 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-201ENST00000368019 CCNB1P14635 433 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 ABCB4P21439 1286 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 GBP2P32456 591 aaPredicted RBP12.2□□□□□ -0.46
USF1-201ENST00000368019 RWDD2BP57060 319 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 COPS2P61201 443 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 IFI35P80217 286 aaPredicted RBP12.2□□□□□ -0.46
USF1-201ENST00000368019 MRPS9P82933 396 aaKnown RBP12.2□□□□□ -0.46
USF1-201ENST00000368019 HTRA4P83105 476 aaPredicted RBP12.2□□□□□ -0.46
USF1-201ENST00000368019 PTP4A2Q12974 167 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 PTK6Q13882 451 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 CBWD6Q4V339 395 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 CBWD3Q5JTY5 395 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 CBWD5Q5RIA9 395 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 SMYD5Q6GMV2 418 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 PPP1R21Q6ZMI0 780 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.2□□□□□ -0.46
USF1-201ENST00000368019 RGS9BPQ6ZS82 235 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 FAM178BQ8IXR5 827 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 MYCT1Q8N699 235 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 DBF4BQ8NFT6 615 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 GDPD5Q8WTR4 605 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 GLG1Q92896 1179 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 C18orf8Q96DM3 657 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 FAM81BQ96LP2 452 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 MAGEB18Q96M61 343 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 RAB3IPQ96QF0 476 aaPredicted RBP12.2□□□□□ -0.46
USF1-201ENST00000368019 TGS1Q96RS0 853 aaKnown RBP12.2□□□□□ -0.46
USF1-201ENST00000368019 TIPINQ9BVW5 301 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 CTNNAL1Q9UBT7 734 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 BAIAP2L1Q9UHR4 511 aa12.2□□□□□ -0.46
USF1-201ENST00000368019 EMSYQ7Z589 1322 aa12.19□□□□□ -0.46
USF1-201ENST00000368019 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.19□□□□□ -0.46
USF1-201ENST00000368019 TLDC2A0PJX2 215 aa12.19□□□□□ -0.46
USF1-201ENST00000368019 H3BRB1 525 aa12.19□□□□□ -0.46
USF1-201ENST00000368019 ABLIM1O14639 778 aa12.19□□□□□ -0.46
USF1-201ENST00000368019 CLGNO14967 610 aa12.19□□□□□ -0.46
USF1-201ENST00000368019 UBOX5O94941 541 aa12.19□□□□□ -0.46
USF1-201ENST00000368019 LUC7L3O95232 432 aaKnown RBP12.19□□□□□ -0.46
USF1-201ENST00000368019 FTLP02792 175 aaPredicted RBP12.19□□□□□ -0.46
USF1-201ENST00000368019 COMTP21964 271 aa12.19□□□□□ -0.46
USF1-201ENST00000368019 CCND2P30279 289 aa12.19□□□□□ -0.46
USF1-201ENST00000368019 ICAM3P32942 547 aa12.19□□□□□ -0.46
USF1-201ENST00000368019 STRN3Q13033 797 aa12.19□□□□□ -0.46
USF1-201ENST00000368019 STAT4Q14765 748 aa12.19□□□□□ -0.46
USF1-201ENST00000368019 PARP6Q2NL67 630 aa12.19□□□□□ -0.46
USF1-201ENST00000368019 PLEKHG4Q58EX7 1191 aa12.19□□□□□ -0.46
USF1-201ENST00000368019 PHLDB3Q6NSJ2 640 aa12.19□□□□□ -0.46
USF1-201ENST00000368019 TTC27Q6P3X3 843 aa12.19□□□□□ -0.46
USF1-201ENST00000368019 ARHGEF18Q6ZSZ5 1173 aa12.19□□□□□ -0.46
USF1-201ENST00000368019 ASRGL1Q7L266 308 aa12.19□□□□□ -0.46
USF1-201ENST00000368019 FAM71AQ8IYT1 594 aa12.19□□□□□ -0.46
USF1-201ENST00000368019 SP7Q8TDD2 431 aaPredicted RBP12.19□□□□□ -0.46
USF1-201ENST00000368019 EPS8L3Q8TE67 593 aaKnown RBP12.19□□□□□ -0.46
USF1-201ENST00000368019 ARHGEF2Q92974 986 aaKnown RBP12.19□□□□□ -0.46
USF1-201ENST00000368019 SNF8Q96H20 258 aa12.19□□□□□ -0.46
USF1-201ENST00000368019 C1QTNF1Q9BXJ1 281 aa12.19□□□□□ -0.46
USF1-201ENST00000368019 CDC42EP4Q9H3Q1 356 aaKnown RBP12.19□□□□□ -0.46
USF1-201ENST00000368019 EPHX3Q9H6B9 360 aa12.19□□□□□ -0.46
USF1-201ENST00000368019 TUT1Q9H6E5 874 aaKnown RBP12.19□□□□□ -0.46
USF1-201ENST00000368019 LRRC4CQ9HCJ2 640 aa12.19□□□□□ -0.46
USF1-201ENST00000368019 UBN1Q9NPG3 1134 aa12.19□□□□□ -0.46
USF1-201ENST00000368019 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.19□□□□□ -0.46
USF1-201ENST00000368019 INSL6Q9Y581 213 aa12.19□□□□□ -0.46
USF1-201ENST00000368019 ATG2AQ2TAZ0 1938 aa12.19□□□□□ -0.46
USF1-201ENST00000368019 RALGAPA2Q2PPJ7 1873 aa12.19□□□□□ -0.46
USF1-201ENST00000368019 SPATA31C2B4DYI2 1134 aa12.18□□□□□ -0.46
USF1-201ENST00000368019 FOXN3O00409 490 aaPredicted RBP12.18□□□□□ -0.46
USF1-201ENST00000368019 MEIS1O00470 390 aa12.18□□□□□ -0.46
USF1-201ENST00000368019 MAGEB2O15479 319 aa12.18□□□□□ -0.46
USF1-201ENST00000368019 TREHO43280 583 aa12.18□□□□□ -0.46
USF1-201ENST00000368019 HNRNPCL1O60812 293 aaKnown RBP12.18□□□□□ -0.46
USF1-201ENST00000368019 SLITRK3O94933 977 aa12.18□□□□□ -0.46
USF1-201ENST00000368019 TTC4O95801 387 aa12.18□□□□□ -0.46
USF1-201ENST00000368019 GAS8O95995 478 aa12.18□□□□□ -0.46
USF1-201ENST00000368019 LGALS2P05162 132 aa12.18□□□□□ -0.46
USF1-201ENST00000368019 SMIM10L2AP0DMW4 78 aa12.18□□□□□ -0.46
USF1-201ENST00000368019 SMIM10L2BP0DMW5 78 aa12.18□□□□□ -0.46
USF1-201ENST00000368019 CALRP27797 417 aaKnown RBP12.18□□□□□ -0.46
USF1-201ENST00000368019 NMT1P30419 496 aaKnown RBP12.18□□□□□ -0.46
USF1-201ENST00000368019 THPOP40225 353 aa12.18□□□□□ -0.46
USF1-201ENST00000368019 SLC1A1P43005 524 aa12.18□□□□□ -0.46
USF1-201ENST00000368019 IRX1P78414 480 aaPredicted RBP12.18□□□□□ -0.46
USF1-201ENST00000368019 ADAM17P78536 824 aa12.18□□□□□ -0.46
USF1-201ENST00000368019 CENPCQ03188 943 aa12.18□□□□□ -0.46
USF1-201ENST00000368019 ZNF211Q13398 564 aaPredicted RBP12.18□□□□□ -0.46
USF1-201ENST00000368019 RASA2Q15283 850 aa12.18□□□□□ -0.46
USF1-201ENST00000368019 ZKSCAN8Q15776 578 aaPredicted RBP12.18□□□□□ -0.46
USF1-201ENST00000368019 VSTM1Q6UX27 236 aa12.18□□□□□ -0.46
USF1-201ENST00000368019 B3GNT9Q6UX72 402 aa12.18□□□□□ -0.46
USF1-201ENST00000368019 SPATA21Q7Z572 469 aa12.18□□□□□ -0.46
USF1-201ENST00000368019 CCDC105Q8IYK2 499 aa12.18□□□□□ -0.46
USF1-201ENST00000368019 DYDC1Q8WWB3 177 aa12.18□□□□□ -0.46
USF1-201ENST00000368019 PSPC1Q8WXF1 523 aaKnown RBP12.18□□□□□ -0.46
USF1-201ENST00000368019 ATP6V0A1Q93050 837 aa12.18□□□□□ -0.46
USF1-201ENST00000368019 TMEM237Q96Q45 408 aa12.18□□□□□ -0.46
USF1-201ENST00000368019 RNPEPQ9H4A4 650 aa12.18□□□□□ -0.46
USF1-201ENST00000368019 ECT2Q9H8V3 914 aa12.18□□□□□ -0.46
USF1-201ENST00000368019 AVENQ9NQS1 362 aaPredicted RBP12.18□□□□□ -0.46
USF1-201ENST00000368019 TXLNGQ9NUQ3 528 aa12.18□□□□□ -0.46
USF1-201ENST00000368019 NOCTQ9UK39 431 aaKnown RBP12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms