RNA–Protein interactions for RNA: ENST00000368012.3

NECTIN4-201, Transcript of nectin cell adhesion molecule 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NECTIN4, Length 3,502 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN4-201ENST00000368012 BATF3Q9NR55 127 aa11.59□□□□□ -0.55
NECTIN4-201ENST00000368012 RAB6BQ9NRW1 208 aa11.59□□□□□ -0.55
NECTIN4-201ENST00000368012 TBC1D22BQ9NU19 505 aa11.59□□□□□ -0.55
NECTIN4-201ENST00000368012 RNF19AQ9NV58 838 aa11.59□□□□□ -0.55
NECTIN4-201ENST00000368012 TMX2Q9Y320 296 aa11.59□□□□□ -0.55
NECTIN4-201ENST00000368012 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.59□□□□□ -0.55
NECTIN4-201ENST00000368012 COL14A1Q05707 1796 aaKnown RBP11.59□□□□□ -0.55
NECTIN4-201ENST00000368012 CCDC78A2IDD5 438 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 MEI4A8MW99 385 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 FDX1P10109 184 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 SLC1A1P43005 524 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 MRPS9P82933 396 aaKnown RBP11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 PRKCEQ02156 737 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 CUL2Q13617 745 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 SNRNP48Q6IEG0 339 aaKnown RBP11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 CRELD2Q6UXH1 353 aaPredicted RBP11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 POU5F2Q8N7G0 328 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 FAM81BQ96LP2 452 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 ARHGEF3Q9NR81 526 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 ARL8BQ9NVJ2 186 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 SEPT10Q9P0V9 454 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 IP6K2Q9UHH9 426 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 SCINQ9Y6U3 715 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 ASTN2O75129 1339 aaPredicted RBP11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 MCF2LO15068 1137 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 MAP3K7O43318 606 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 CCNE2O96020 404 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 KRT3P12035 628 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 SKIP12755 728 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 KCNA3P22001 575 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 SERPINB4P48594 390 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 RGS7P49802 495 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 NR1H3Q13133 447 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 HADHQ16836 314 aaKnown RBP11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 SCARA3Q6AZY7 606 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 CGB2Q6NT52 195 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 NPNTQ6UXI9 565 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 RSPH3Q86UC2 560 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 TMEM130Q8N3G9 435 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 ATP11CQ8NB49 1132 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 TMEM35BQ8NCS4 154 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 UBA3Q8TBC4 463 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 SPATA18Q8TC71 538 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 SYTL5Q8TDW5 730 aaPredicted RBP11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 ATG4CQ96DT6 458 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 PRR11Q96HE9 360 aaPredicted RBP11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 APOL6Q9BWW8 343 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 TMEM120AQ9BXJ8 343 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 PAPOLBQ9NRJ5 636 aaKnown RBP11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 PCMTD2Q9NV79 361 aa11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 ZNF70Q9UC06 446 aaPredicted RBP11.58□□□□□ -0.56
NECTIN4-201ENST00000368012 DNALI1O14645 258 aaPredicted RBP11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 NR3C2P08235 984 aa11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 RANBP1P43487 201 aa11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 CDH6P55285 790 aa11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 GEMIN4P57678 1058 aaKnown RBP11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 MYL6P60660 151 aa11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 WDR72Q3MJ13 1102 aa11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 TDRD10Q5VZ19 366 aaKnown RBP11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 OR6B2Q6IFH4 312 aa11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 SPOCD1Q6ZMY3 1216 aa11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 LRRC71Q8N4P6 559 aa11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 SMC1BQ8NDV3 1235 aa11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 KCND2Q9NZV8 630 aa11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 TJP2Q9UDY2 1190 aa11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 NUB1Q9Y5A7 615 aa11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 TRIM49D1C9J1S8 452 aa11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 P4HA2O15460 535 aa11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 ELK3P41970 407 aa11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 FAAP100Q0VG06 881 aa11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 GRIK3Q13003 919 aa11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 ALYREFQ86V81 257 aaKnown RBP11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 FAM160B2Q86V87 743 aa11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 C7orf31Q8N865 590 aa11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 SCG3Q8WXD2 468 aaKnown RBP11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 CD48P09326 243 aa11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 GDF10P55107 478 aa11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 MMRN1Q13201 1228 aa11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 TATDN1Q6P1N9 297 aa11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 RCOR2Q8IZ40 523 aa11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 SLC26A7Q8TE54 656 aa11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 ZNF516Q92618 1163 aa11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 CD101Q93033 1021 aa11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 FEM1BQ9UK73 627 aa11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 SMG5Q9UPR3 1016 aaKnown RBP11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 UBE4BO95155 1302 aa11.57□□□□□ -0.56
NECTIN4-201ENST00000368012 TNRC6CQ9HCJ0 1690 aaKnown RBP11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 CCDC22O60826 627 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 CST3P01034 146 aaPredicted RBP11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 ASNSP08243 561 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 TNFSF9P41273 254 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 WNT7BP56706 349 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 INHBEP58166 350 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 GTF2BQ00403 316 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 CENPCQ03188 943 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 TAF5Q15542 800 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 VPS72Q15906 364 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 SLC15A2Q16348 729 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 RGS9BPQ6ZS82 235 aa11.56□□□□□ -0.56
NECTIN4-201ENST00000368012 SLC9A9Q8IVB4 645 aa11.56□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms