RNA–Protein interactions for RNA: ENST00000366769.7

CDC42BPA-205, Transcript of CDC42 binding protein kinase alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-205ENST00000366769 FOSP01100 380 aaPredicted RBP11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 COPZ1P61923 177 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 BNIP1Q12981 228 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 CCDC153Q494R4 210 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 C12orf60Q5U649 245 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 PARP8Q8N3A8 854 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 RAB42Q8N4Z0 105 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 WDR35Q9P2L0 1181 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 PCDH11XQ9BZA7 1347 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 PCDH11YQ9BZA8 1340 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 RNF103O00237 685 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 PIK3R2O00459 728 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 ADSLP30566 484 aaPredicted RBP11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 PCNX4Q63HM2 1172 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 GALNT18Q6P9A2 607 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 EAF2Q96CJ1 260 aaPredicted RBP11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 METTL22Q9BUU2 404 aaPredicted RBP11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 ETNK2Q9NVF9 386 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 H2AFY2Q9P0M6 372 aaPredicted RBP11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 SLC12A4Q9UP95 1085 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 SLC10A5Q5PT55 438 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 BNC2Q6ZN30 1099 aaPredicted RBP11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 RERGLQ9H628 205 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 A1CFQ9NQ94 594 aaKnown RBP11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 MAGI1Q96QZ7 1491 aaPredicted RBP11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 SLC5A9Q2M3M2 681 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 SPRTNQ9H040 489 aaPredicted RBP11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 MYL2P10916 166 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 CHRM1P11229 460 aaPredicted RBP11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 ZNF23P17027 643 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 TRIP4Q15650 581 aaPredicted RBP11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 IL31Q6EBC2 164 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 RIPOR1Q6ZS17 1223 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 THEM5Q8N1Q8 247 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 DCUN1D1Q96GG9 259 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 OXNAD1Q96HP4 312 aaPredicted RBP11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 BCL2L14Q9BZR8 327 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 POLR1BQ9H9Y6 1135 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 EHD3Q9NZN3 535 aa11.51□□□□□ -0.57
CDC42BPA-205ENST00000366769 APBA3O96018 575 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 SGO1Q5FBB7 561 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 USP13Q92995 863 aaPredicted RBP11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 SENP7Q9BQF6 1050 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 DIS3Q9Y2L1 958 aaKnown RBP11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 DRD4P21917 467 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 CCNE1P24864 410 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 PARP10Q53GL7 1025 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 SH2B2O14492 632 aaPredicted RBP11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 ALBP02768 609 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 CYP21A2P08686 494 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 GALNT6Q8NCL4 622 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 SLC39A3Q9BRY0 314 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 MPP6Q9NZW5 540 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 MAD2L2Q9UI95 211 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 A0A0U1RQJ8 604 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 RNMTO43148 476 aaKnown RBP11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 GYG1P46976 350 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 CSE1LP55060 971 aaKnown RBP11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 NME5P56597 212 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 NFX1Q12986 1120 aaKnown RBP11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 SGSM1Q2NKQ1 1148 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 C17orf80Q9BSJ5 609 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 TRIM54Q9BYV2 358 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 EMC3Q9P0I2 261 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 BOLA2-SMG1P6H3BVE0 249 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 NME3Q13232 169 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 MAPRE1Q15691 268 aaKnown RBP11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 C6orf10Q5SRN2 563 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 DCAF5Q96JK2 942 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 MSTO1Q9BUK6 570 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 CLEC4MQ9H2X3 399 aaPredicted RBP11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 ZNF556Q9HAH1 456 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 TRIM49D1C9J1S8 452 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 KDELC2Q7Z4H8 507 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 CCDC78A2IDD5 438 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 TOMM70O94826 608 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 YWHABP31946 246 aaKnown RBP11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 MAGEC3Q8TD91 643 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 KCTD4Q8WVF5 259 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 MROH5Q6ZUA9 1318 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 E9PBE3 544 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 TJP3O95049 919 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 NADKO95544 446 aaPredicted RBP11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 BGNP21810 368 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 ADORA1P30542 326 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 C15orf59Q2T9L4 293 aaPredicted RBP11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 CYFIP1Q7L576 1253 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 PEX5LQ8IYB4 626 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.5□□□□□ -0.573e-6■■■■■ 34.1
CDC42BPA-205ENST00000366769 MAGEB5Q9BZ81 275 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 MYOM2P54296 1465 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 CLASP1Q7Z460 1538 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 ZNF862O60290 1169 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 BCAMP50895 628 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 PLBD2Q8NHP8 589 aa11.5□□□□□ -0.57
CDC42BPA-205ENST00000366769 LOC100506127A0A0U1RQW1 187 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 SOX6P35712 828 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 SHROOM1Q2M3G4 852 aaPredicted RBP11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 ANKRD40Q6AI12 368 aa11.49□□□□□ -0.57
CDC42BPA-205ENST00000366769 ZBTB49Q6ZSB9 765 aa11.49□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms