RNA–Protein interactions for RNA: ENST00000366767.7

CDC42BPA-204, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 9,320 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-204ENST00000366767 PTK6Q13882 451 aa5.62□□□□□ -1.51
CDC42BPA-204ENST00000366767 PGM5Q15124 567 aa5.62□□□□□ -1.51
CDC42BPA-204ENST00000366767 RARS2Q5T160 578 aaKnown RBP5.62□□□□□ -1.51
CDC42BPA-204ENST00000366767 SV2AQ7L0J3 742 aa5.62□□□□□ -1.51
CDC42BPA-204ENST00000366767 NANOGNBQ7Z5D8 188 aa5.62□□□□□ -1.51
CDC42BPA-204ENST00000366767 HORMAD1Q86X24 394 aa5.62□□□□□ -1.51
CDC42BPA-204ENST00000366767 TMEM109Q9BVC6 243 aa5.62□□□□□ -1.51
CDC42BPA-204ENST00000366767 TMEM134Q9H6X4 195 aa5.62□□□□□ -1.51
CDC42BPA-204ENST00000366767 PAK5Q9P286 719 aa5.62□□□□□ -1.51
CDC42BPA-204ENST00000366767 ITGB1BP2Q9UKP3 347 aa5.62□□□□□ -1.51
CDC42BPA-204ENST00000366767 SESN1Q9Y6P5 492 aa5.62□□□□□ -1.51
CDC42BPA-204ENST00000366767 FAM153BP0C7A2 387 aa5.62□□□□□ -1.51
CDC42BPA-204ENST00000366767 ACAP1Q15027 740 aa5.62□□□□□ -1.51
CDC42BPA-204ENST00000366767 FAM153CQ494X1 144 aa5.62□□□□□ -1.51
CDC42BPA-204ENST00000366767 ZPBP2Q6X784 338 aa5.62□□□□□ -1.51
CDC42BPA-204ENST00000366767 WDR49Q8IV35 697 aa5.62□□□□□ -1.51
CDC42BPA-204ENST00000366767 BEST2Q8NFU1 509 aa5.62□□□□□ -1.51
CDC42BPA-204ENST00000366767 SNX25Q9H3E2 840 aa5.62□□□□□ -1.51
CDC42BPA-204ENST00000366767 PRMT7Q9NVM4 692 aaPredicted RBP5.62□□□□□ -1.51
CDC42BPA-204ENST00000366767 DMAC2Q9NW81 257 aa5.62□□□□□ -1.51
CDC42BPA-204ENST00000366767 FAM153AQ9UHL3 310 aa5.62□□□□□ -1.51
CDC42BPA-204ENST00000366767 GOLGA4Q13439 2230 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 MAGEB2O15479 319 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 HBP1O60381 514 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 LPXNO60711 386 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 PPP1R11O60927 126 aaPredicted RBP5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 SERPINB1P30740 379 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 EVX2Q03828 476 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 NFX1Q12986 1120 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 LONRF1Q17RB8 773 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 CBWD6Q4V339 395 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 CBWD3Q5JTY5 395 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 CBWD5Q5RIA9 395 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 ARHGEF19Q8IW93 802 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 MCOLN2Q8IZK6 566 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 GLIS3Q8NEA6 775 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 CPA5Q8WXQ8 436 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 RNF34Q969K3 372 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 CBWD1Q9BRT8 395 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 ING2Q9H160 280 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 CDC42EP4Q9H3Q1 356 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 SMARCAD1Q9H4L7 1026 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 TOPORSQ9NS56 1045 aaPredicted RBP5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 TMA7Q9Y2S6 64 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 CAB39Q9Y376 341 aaPredicted RBP5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 COL1A1P02452 1464 aaPredicted RBP5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 SNED1Q8TER0 1413 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 PHF20L1A8MW92 1017 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 PSMD3O43242 534 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 TLR2O60603 784 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 MTA2O94776 668 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 MYBL2P10244 700 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 TBC1D10BQ4KMP7 808 aaPredicted RBP5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 PASD1Q8IV76 773 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 DEPDC1BQ8WUY9 529 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 SHISA4Q96DD7 197 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 DACH2Q96NX9 599 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 PHACTR1Q9C0D0 580 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 TRABDQ9H4I3 376 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 A0A1B0GW55 424 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 OGTO15294 1046 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 DUX4L2P0CJ85 424 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 DUX4L3P0CJ86 424 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 DUX4L4P0CJ87 422 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 DUX4L5P0CJ88 424 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 DUX4L6P0CJ89 424 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 DUX4L7P0CJ90 424 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 CYP2C8P10632 490 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 DYNLT1P63172 113 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 CYTH1Q15438 398 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 P3H1Q32P28 736 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 HP1BP3Q5SSJ5 553 aaPredicted RBP5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 CBWD2Q8IUF1 395 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 LRRC34Q8IZ02 419 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 ZBED8Q8IZ13 594 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 SLC26A7Q8TE54 656 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 ZWILCHQ9H900 591 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 STX18Q9P2W9 335 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 PPARGC1AQ9UBK2 798 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 DUX4Q9UBX2 424 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 FAM170AA1A519 330 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 DDX3YO15523 660 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 GSTA2P09210 222 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 HSPA8P11142 646 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 CHRNA5P30532 468 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 MTMR2Q13614 643 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 PLA2G4FQ68DD2 849 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 MTO1Q9Y2Z2 717 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 C10orf71Q711Q0 1435 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 SKAP2O75563 359 aaPredicted RBP5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 ACOT2P49753 483 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 HSD17B4P51659 736 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 EIF3EP60228 445 aaKnown RBP5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 ACTR2P61160 394 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 KYNUQ16719 465 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 RFX8Q6ZV50 586 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 ZNF483Q8TF39 744 aaPredicted RBP5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 HSPH1Q92598 858 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 GOLPH3Q9H4A6 298 aa5.61□□□□□ -1.51
CDC42BPA-204ENST00000366767 MRGBPQ9NV56 204 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms