RNA–Protein interactions for RNA: ENST00000364588.1

RNU4-4P-201, Transcript of RNA, U4 small nuclear 4, pseudogene, humanhuman

BASIC

Gene RNU4-4P, Length 130 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-4P-201ENST00000364588 SEC62Q99442 399 aaKnown RBP6.11□□□□□ -1.43
RNU4-4P-201ENST00000364588 FOXB1Q99853 325 aa6.11□□□□□ -1.43
RNU4-4P-201ENST00000364588 AMNQ9BXJ7 453 aa6.11□□□□□ -1.43
RNU4-4P-201ENST00000364588 MEGF9Q9H1U4 602 aa6.11□□□□□ -1.43
RNU4-4P-201ENST00000364588 HOMER2Q9NSB8 354 aa6.11□□□□□ -1.43
RNU4-4P-201ENST00000364588 PPP4R1LQ9P1A2 415 aa6.11□□□□□ -1.43
RNU4-4P-201ENST00000364588 FAM184BQ9ULE4 1060 aa6.11□□□□□ -1.43
RNU4-4P-201ENST00000364588 IGKV6D-41A0A0C4DH26 115 aa6.1□□□□□ -1.43
RNU4-4P-201ENST00000364588 PTPDC1A2A3K4 754 aa6.1□□□□□ -1.43
RNU4-4P-201ENST00000364588 DUSP11O75319 330 aaKnown RBP6.1□□□□□ -1.43
RNU4-4P-201ENST00000364588 CNOT4O95628 575 aaKnown RBP6.1□□□□□ -1.43
RNU4-4P-201ENST00000364588 ASGR1P07306 291 aa6.1□□□□□ -1.43
RNU4-4P-201ENST00000364588 APEX1P27695 318 aaKnown RBP6.1□□□□□ -1.43
RNU4-4P-201ENST00000364588 ADCY8P40145 1251 aa6.1□□□□□ -1.43
RNU4-4P-201ENST00000364588 CNTN2Q02246 1040 aa6.1□□□□□ -1.43
RNU4-4P-201ENST00000364588 TMEM200BQ69YZ2 307 aa6.1□□□□□ -1.43
RNU4-4P-201ENST00000364588 GRAMD4Q6IC98 578 aa6.1□□□□□ -1.43
RNU4-4P-201ENST00000364588 CCSAPQ6IQ19 270 aaPredicted RBP6.1□□□□□ -1.43
RNU4-4P-201ENST00000364588 GIMAP6Q6P9H5 292 aa6.1□□□□□ -1.43
RNU4-4P-201ENST00000364588 MAMDC4Q6UXC1 1216 aa6.1□□□□□ -1.43
RNU4-4P-201ENST00000364588 ARMCX2Q7L311 632 aa6.1□□□□□ -1.43
RNU4-4P-201ENST00000364588 ANKRD33Q7Z3H0 272 aa6.1□□□□□ -1.43
RNU4-4P-201ENST00000364588 MSL3Q8N5Y2 521 aaKnown RBP6.1□□□□□ -1.43
RNU4-4P-201ENST00000364588 KLHDC9Q8NEP7 349 aa6.1□□□□□ -1.43
RNU4-4P-201ENST00000364588 CHST13Q8NET6 341 aa6.1□□□□□ -1.43
RNU4-4P-201ENST00000364588 GPATCH3Q96I76 525 aa6.1□□□□□ -1.43
RNU4-4P-201ENST00000364588 GLT1D1Q96MS3 346 aa6.1□□□□□ -1.43
RNU4-4P-201ENST00000364588 SLC38A10Q9HBR0 1119 aa6.1□□□□□ -1.43
RNU4-4P-201ENST00000364588 MTMR4Q9NYA4 1195 aa6.1□□□□□ -1.43
RNU4-4P-201ENST00000364588 B4GALT6Q9UBX8 382 aa6.1□□□□□ -1.43
RNU4-4P-201ENST00000364588 FEM1BQ9UK73 627 aa6.1□□□□□ -1.43
RNU4-4P-201ENST00000364588 MRPL42Q9Y6G3 142 aaKnown RBP6.1□□□□□ -1.43
RNU4-4P-201ENST00000364588 DDX49Q9Y6V7 483 aaKnown RBP6.1□□□□□ -1.43
RNU4-4P-201ENST00000364588 CDH23Q9H251 3354 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 GBF1Q92538 1859 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 LRRC37A2A6NM11 1700 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 A0A0G2JNJ9 132 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 C11orf97A0A1B0GVM6 126 aaPredicted RBP6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 GRXCR1A8MXD5 290 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 TMEM232C9JQI7 657 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 GOLGA6L22H0YM25 854 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 ATP2A1O14983 1001 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 TTLL1O95922 423 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 TIMP1P01033 207 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 CYP17A1P05093 508 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 ZFYP08048 801 aaPredicted RBP6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 ZNF888P0CJ79 500 aaPredicted RBP6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 TSPY3P0CV98 308 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 TSPY8P0CW00 308 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 CSF2RAP15509 400 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 GNAT2P19087 354 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 SDSP20132 328 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 MEOX1P50221 254 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 RAC3P60763 192 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 SNAP25P60880 206 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 BEX3Q00994 111 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 TFAP4Q01664 338 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 ALDH6A1Q02252 535 aaKnown RBP6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 ROM1Q03395 351 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 IKQ13123 557 aaPredicted RBP6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 EIF4HQ15056 248 aaKnown RBP6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 CDCA2Q69YH5 1023 aaPredicted RBP6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 LRSAM1Q6UWE0 723 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 NOL8Q76FK4 1167 aaKnown RBP6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 RASGRP2Q7LDG7 609 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 NOP9Q86U38 636 aaKnown RBP6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 JAZF1Q86VZ6 243 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 PPM1KQ8N3J5 372 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 KIAA1958Q8N8K9 716 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 USP38Q8NB14 1042 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 PCSK9Q8NBP7 692 aaKnown RBP6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 GMCL1P1Q8NEA9 526 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 OTUD7AQ8TE49 926 aaPredicted RBP6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 NINJ1Q92982 152 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 LMF1Q96S06 567 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 ORAI3Q9BRQ5 295 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 SSBP3Q9BWW4 388 aaPredicted RBP6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 KRTAP4-9Q9BYQ8 210 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 ABHD16BQ9H3Z7 469 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 DCTPP1Q9H773 170 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 SPC25Q9HBM1 224 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 ZNF287Q9HBT7 754 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 RNF146Q9NTX7 359 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 Q9UFV3 132 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 FBXO40Q9UH90 709 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 TBX21Q9UL17 535 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 ZKSCAN5Q9Y2L8 839 aa6.09□□□□□ -1.43
RNU4-4P-201ENST00000364588 ASTN1O14525 1302 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 ELP1O95163 1332 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 MROH7Q68CQ1 1323 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 LCTP09848 1927 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 A0A0U1RQG5 324 aaPredicted RBP6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 UBA6A0AVT1 1052 aaPredicted RBP6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 CTAGE5O15320 804 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 NMT2O60551 498 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 GAS7O60861 476 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 ALAS1P13196 640 aa6.08□□□□□ -1.44
RNU4-4P-201ENST00000364588 MCCP23508 829 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms