RNA–Protein interactions for RNA: ENST00000364054.1

RNU6-1048P-201, Transcript of RNA, U6 small nuclear 1048, pseudogene, humanhuman

BASIC

Gene RNU6-1048P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-1048P-201ENST00000364054 PSMC1P62191 440 aaKnown RBP2.37□□□□□ -2.03
RNU6-1048P-201ENST00000364054 TCF15Q12870 199 aa2.37□□□□□ -2.03
RNU6-1048P-201ENST00000364054 ZNF260Q3ZCT1 412 aa2.37□□□□□ -2.03
RNU6-1048P-201ENST00000364054 RUSC1-AS1Q66K80 236 aa2.37□□□□□ -2.03
RNU6-1048P-201ENST00000364054 SLC4A10Q6U841 1118 aa2.37□□□□□ -2.03
RNU6-1048P-201ENST00000364054 TRIM72Q6ZMU5 477 aa2.37□□□□□ -2.03
RNU6-1048P-201ENST00000364054 PARS2Q7L3T8 475 aaKnown RBP2.37□□□□□ -2.03
RNU6-1048P-201ENST00000364054 TECPR1Q7Z6L1 1165 aa2.37□□□□□ -2.03
RNU6-1048P-201ENST00000364054 GALNT4Q8N4A0 578 aa2.37□□□□□ -2.03
RNU6-1048P-201ENST00000364054 LRRC71Q8N4P6 559 aa2.37□□□□□ -2.03
RNU6-1048P-201ENST00000364054 PNLDC1Q8NA58 520 aaKnown RBP2.37□□□□□ -2.03
RNU6-1048P-201ENST00000364054 ABHD11Q8NFV4 315 aa2.37□□□□□ -2.03
RNU6-1048P-201ENST00000364054 SLC2A13Q96QE2 648 aa2.37□□□□□ -2.03
RNU6-1048P-201ENST00000364054 SERGEFQ9UGK8 458 aa2.37□□□□□ -2.03
RNU6-1048P-201ENST00000364054 FEZ2Q9UHY8 353 aaPredicted RBP2.37□□□□□ -2.03
RNU6-1048P-201ENST00000364054 ZNF112Q9UJU3 913 aa2.37□□□□□ -2.03
RNU6-1048P-201ENST00000364054 CCNL1Q9UK58 526 aaPredicted RBP2.37□□□□□ -2.03
RNU6-1048P-201ENST00000364054 FAM90A10PA6NDY2 464 aa2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 DSCR3O14972 297 aa2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 XPOTO43592 962 aaKnown RBP2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 RNF8O76064 485 aa2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 TOP3BO95985 862 aaKnown RBP2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 NR4A2P43354 598 aa2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 TPTEP56180 551 aa2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 LOXL3P58215 753 aa2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 GPSM2P81274 684 aa2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 E2F2Q14209 437 aa2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 KIF22Q14807 665 aa2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 KHDC1Q4VXA5 237 aaKnown RBP2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 MIDNQ504T8 468 aa2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 CEP78Q5JTW2 689 aa2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 FAM160B1Q5W0V3 765 aa2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 DENND2CQ68D51 928 aa2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 TAF2Q6P1X5 1199 aa2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 SLC2A7Q6PXP3 512 aa2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 ZDHHC17Q8IUH5 632 aa2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 SAMD14Q8IZD0 417 aaPredicted RBP2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 FAM109AQ8N4B1 249 aa2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 CPA6Q8N4T0 437 aa2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 NANOGP1Q8N7R0 232 aa2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 NSUN6Q8TEA1 469 aaKnown RBP2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 FYTTD1Q96QD9 318 aaKnown RBP2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 EBF3Q9H4W6 596 aa2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 GLOD4Q9HC38 313 aa2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 DUSP22Q9NRW4 184 aa2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 ETAA1Q9NY74 926 aa2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 SLC5A4Q9NY91 659 aa2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 MAFFQ9ULX9 164 aa2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 TBX22Q9Y458 520 aa2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 IPPQ9Y573 584 aa2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 WDR17Q8IZU2 1322 aa2.36□□□□□ -2.03
RNU6-1048P-201ENST00000364054 IGKV2D-30A0A075B6S6 120 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 SMIM35A0A1B0GVV1 85 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 CCDC154A6NI56 674 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 TISP43B9A030 160 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 H0YIZ8 118 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 F2RL2O00254 374 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 HTRA2O43464 458 aaPredicted RBP2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 TJP3O95049 919 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 NTN1O95631 604 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 XRCC6P12956 609 aaKnown RBP eCLIP2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 LPOP22079 712 aaPredicted RBP2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 CCKARP32238 428 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 ARHGAP25P42331 645 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 KCNJ4P48050 445 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 PXNP49023 591 aaPredicted RBP2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 FXR1P51114 621 aaKnown RBP eCLIP2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 ADKP55263 362 aaKnown RBP2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 KIF23Q02241 960 aaPredicted RBP2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 IQCB1Q15051 598 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 RABEP1Q15276 862 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 UAP1L1Q3KQV9 507 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 SUPT20HL1Q3ZLR7 823 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 LONRF3Q496Y0 759 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 FLYWCH1Q4VC44 716 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 TREML2Q5T2D2 321 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 EFCAB2Q5VUJ9 269 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 ANO7Q6IWH7 933 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 LVRNQ6Q4G3 990 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 TMEM108Q6UXF1 575 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 SERPINA13PQ6UXR4 307 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 ZNF66Q6ZN08 573 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 USP37Q86T82 979 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 MIER2Q8N344 545 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 C8orf58Q8NAV2 365 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 ADAMTS15Q8TE58 950 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 JADE3Q92613 823 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 COA7Q96BR5 231 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 REPS1Q96D71 796 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 LRIG1Q96JA1 1093 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 PTDSS2Q9BVG9 487 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 FSD1LQ9BXM9 530 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 QTRT1Q9BXR0 403 aaKnown RBP2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 TINAGL1Q9GZM7 467 aaPredicted RBP2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 SLAMF7Q9NQ25 335 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 TRMT13Q9NUP7 481 aaKnown RBP2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 TRNAU1APQ9NX07 287 aaKnown RBP2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 DLL3Q9NYJ7 618 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 ZNF580Q9UK33 172 aa2.35□□□□□ -2.03
RNU6-1048P-201ENST00000364054 SLC45A2Q9UMX9 530 aa2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms