RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 ZKSCAN5Q9Y2L8 839 aa21.96■■□□□ 1.11
SHISA4-201ENST00000362011 ARIH1Q9Y4X5 557 aaPredicted RBP21.96■■□□□ 1.11
SHISA4-201ENST00000362011 SF3B1O75533 1304 aaKnown RBP eCLIP21.95■■□□□ 1.11
SHISA4-201ENST00000362011 EIF3CLB5ME19 914 aaKnown RBP21.95■■□□□ 1.1
SHISA4-201ENST00000362011 GABRDO14764 452 aa21.95■■□□□ 1.1
SHISA4-201ENST00000362011 CALCAP01258 141 aa21.95■■□□□ 1.1
SHISA4-201ENST00000362011 CD19P15391 556 aa21.95■■□□□ 1.1
SHISA4-201ENST00000362011 PBX3P40426 434 aa21.95■■□□□ 1.1
SHISA4-201ENST00000362011 CDR2Q01850 454 aa21.95■■□□□ 1.1
SHISA4-201ENST00000362011 ORC1Q13415 861 aa21.95■■□□□ 1.1
SHISA4-201ENST00000362011 TAF3Q5VWG9 929 aa21.95■■□□□ 1.1
SHISA4-201ENST00000362011 KCNT2Q6UVM3 1135 aa21.95■■□□□ 1.1
SHISA4-201ENST00000362011 FIBCD1Q8N539 461 aa21.95■■□□□ 1.1
SHISA4-201ENST00000362011 COLGALT1Q8NBJ5 622 aa21.95■■□□□ 1.1
SHISA4-201ENST00000362011 DDX1Q92499 740 aaKnown RBP21.95■■□□□ 1.1
SHISA4-201ENST00000362011 HLA-CQ95604 372 aa21.95■■□□□ 1.1
SHISA4-201ENST00000362011 EIF3CQ99613 913 aaKnown RBP21.95■■□□□ 1.1
SHISA4-201ENST00000362011 RAD9AQ99638 391 aa21.95■■□□□ 1.1
SHISA4-201ENST00000362011 SEPT11Q9NVA2 429 aaKnown RBP21.95■■□□□ 1.1
SHISA4-201ENST00000362011 KIAA1257Q9ULG3 409 aa21.95■■□□□ 1.1
SHISA4-201ENST00000362011 NME7Q9Y5B8 376 aa21.95■■□□□ 1.1
SHISA4-201ENST00000362011 TIMM13Q9Y5L4 95 aaPredicted RBP21.95■■□□□ 1.1
SHISA4-201ENST00000362011 COL4A4P53420 1690 aaPredicted RBP21.94■■□□□ 1.1
SHISA4-201ENST00000362011 LCHNA4D1U4 455 aa21.94■■□□□ 1.1
SHISA4-201ENST00000362011 SYN3O14994 580 aa21.94■■□□□ 1.1
SHISA4-201ENST00000362011 MED7O43513 233 aa21.94■■□□□ 1.1
SHISA4-201ENST00000362011 IPO7O95373 1038 aaKnown RBP21.94■■□□□ 1.1
SHISA4-201ENST00000362011 MMEP08473 750 aa21.94■■□□□ 1.1
SHISA4-201ENST00000362011 VDRP11473 427 aa21.94■■□□□ 1.1
SHISA4-201ENST00000362011 CHRNB2P17787 502 aa21.94■■□□□ 1.1
SHISA4-201ENST00000362011 BRD2P25440 801 aaKnown RBP21.94■■□□□ 1.1
SHISA4-201ENST00000362011 SLC18A3Q16572 532 aa21.94■■□□□ 1.1
SHISA4-201ENST00000362011 FUT10Q6P4F1 479 aa21.94■■□□□ 1.1
SHISA4-201ENST00000362011 LNX1Q8TBB1 728 aaPredicted RBP21.94■■□□□ 1.1
SHISA4-201ENST00000362011 TNIP3Q96KP6 325 aa21.94■■□□□ 1.1
SHISA4-201ENST00000362011 HEXIM2Q96MH2 286 aaKnown RBP21.94■■□□□ 1.1
SHISA4-201ENST00000362011 SPTLC3Q9NUV7 552 aa21.94■■□□□ 1.1
SHISA4-201ENST00000362011 DDX43Q9NXZ2 648 aaKnown RBP21.94■■□□□ 1.1
SHISA4-201ENST00000362011 ADAMTS1Q9UHI8 967 aa21.94■■□□□ 1.1
SHISA4-201ENST00000362011 DDX3XO00571 662 aaKnown RBP eCLIP21.93■■□□□ 1.1
SHISA4-201ENST00000362011 PDGFRBP09619 1106 aa21.93■■□□□ 1.1
SHISA4-201ENST00000362011 FMO1Q01740 532 aa21.93■■□□□ 1.1
SHISA4-201ENST00000362011 SGO2Q562F6 1265 aa21.93■■□□□ 1.1
SHISA4-201ENST00000362011 OVOS1Q6IE37 1185 aa21.93■■□□□ 1.1
SHISA4-201ENST00000362011 ACOT1Q86TX2 421 aa21.93■■□□□ 1.1
SHISA4-201ENST00000362011 GLYCTKQ8IVS8 523 aa21.93■■□□□ 1.1
SHISA4-201ENST00000362011 THEM5Q8N1Q8 247 aa21.93■■□□□ 1.1
SHISA4-201ENST00000362011 SLC39A11Q8N1S5 342 aa21.93■■□□□ 1.1
SHISA4-201ENST00000362011 OLIG1Q8TAK6 271 aa21.93■■□□□ 1.1
SHISA4-201ENST00000362011 ZNF606Q8WXB4 792 aa21.93■■□□□ 1.1
SHISA4-201ENST00000362011 PDCL3Q9H2J4 239 aa21.93■■□□□ 1.1
SHISA4-201ENST00000362011 EPHX3Q9H6B9 360 aa21.93■■□□□ 1.1
SHISA4-201ENST00000362011 AAASQ9NRG9 546 aa21.93■■□□□ 1.1
SHISA4-201ENST00000362011 PATJQ8NI35 1801 aa21.93■■□□□ 1.1
SHISA4-201ENST00000362011 A0A087X0T9 212 aa21.92■■□□□ 1.1
SHISA4-201ENST00000362011 LCA5LO95447 670 aa21.92■■□□□ 1.1
SHISA4-201ENST00000362011 FAM228BP0C875 321 aa21.92■■□□□ 1.1
SHISA4-201ENST00000362011 LMO2P25791 158 aa21.92■■□□□ 1.1
SHISA4-201ENST00000362011 PCSK1P29120 753 aa21.92■■□□□ 1.1
SHISA4-201ENST00000362011 TKTP29401 623 aaKnown RBP21.92■■□□□ 1.1
SHISA4-201ENST00000362011 YWHAHQ04917 246 aaPredicted RBP21.92■■□□□ 1.1
SHISA4-201ENST00000362011 GFPT1Q06210 699 aaPredicted RBP21.92■■□□□ 1.1
SHISA4-201ENST00000362011 SPA17Q15506 151 aa21.92■■□□□ 1.1
SHISA4-201ENST00000362011 TRIM72Q6ZMU5 477 aa21.92■■□□□ 1.1
SHISA4-201ENST00000362011 TOGARAM2Q6ZUX3 1019 aa21.92■■□□□ 1.1
SHISA4-201ENST00000362011 TMEM173Q86WV6 379 aaPredicted RBP21.92■■□□□ 1.1
SHISA4-201ENST00000362011 CRYBG2Q8N1P7 616 aa21.92■■□□□ 1.1
SHISA4-201ENST00000362011 SLC30A5Q8TAD4 765 aa21.92■■□□□ 1.1
SHISA4-201ENST00000362011 SP7Q8TDD2 431 aaPredicted RBP21.92■■□□□ 1.1
SHISA4-201ENST00000362011 BCL7CQ8WUZ0 217 aaPredicted RBP21.92■■□□□ 1.1
SHISA4-201ENST00000362011 FAM122AQ96E09 287 aa21.92■■□□□ 1.1
SHISA4-201ENST00000362011 IGSF21Q96ID5 467 aa21.92■■□□□ 1.1
SHISA4-201ENST00000362011 GPR62Q9BZJ7 368 aa21.92■■□□□ 1.1
SHISA4-201ENST00000362011 DPEP3Q9H4B8 488 aa21.92■■□□□ 1.1
SHISA4-201ENST00000362011 HCRTO43612 131 aa21.91■■□□□ 1.1
SHISA4-201ENST00000362011 ERVK-21P61565 698 aa21.91■■□□□ 1.1
SHISA4-201ENST00000362011 KRT83P78385 493 aa21.91■■□□□ 1.1
SHISA4-201ENST00000362011 STILQ15468 1287 aa21.91■■□□□ 1.1
SHISA4-201ENST00000362011 FAM171A1Q5VUB5 890 aa21.91■■□□□ 1.1
SHISA4-201ENST00000362011 PDZRN4Q6ZMN7 1036 aaPredicted RBP21.91■■□□□ 1.1
SHISA4-201ENST00000362011 ACRBPQ8NEB7 543 aa21.91■■□□□ 1.1
SHISA4-201ENST00000362011 TFAP2BQ92481 460 aa21.91■■□□□ 1.1
SHISA4-201ENST00000362011 SYT15Q9BQS2 421 aa21.91■■□□□ 1.1
SHISA4-201ENST00000362011 DESI2Q9BSY9 194 aa21.91■■□□□ 1.1
SHISA4-201ENST00000362011 LRFN3Q9BTN0 628 aa21.91■■□□□ 1.1
SHISA4-201ENST00000362011 SPG21Q9NZD8 308 aa21.91■■□□□ 1.1
SHISA4-201ENST00000362011 CDH9Q9ULB4 789 aa21.91■■□□□ 1.1
SHISA4-201ENST00000362011 PCDHGC3Q9UN70 934 aa21.91■■□□□ 1.1
SHISA4-201ENST00000362011 CCDC175P0C221 793 aa21.9■■□□□ 1.1
SHISA4-201ENST00000362011 FGFR3P22607 806 aa21.9■■□□□ 1.1
SHISA4-201ENST00000362011 ACAT1P24752 427 aaKnown RBP21.9■■□□□ 1.1
SHISA4-201ENST00000362011 PPM1AP35813 382 aa21.9■■□□□ 1.1
SHISA4-201ENST00000362011 B3GALNT2Q8NCR0 500 aa21.9■■□□□ 1.1
SHISA4-201ENST00000362011 TMEM169Q96HH4 297 aa21.9■■□□□ 1.1
SHISA4-201ENST00000362011 LUC7LQ9NQ29 371 aaKnown RBP21.9■■□□□ 1.1
SHISA4-201ENST00000362011 EIF2AK3Q9NZJ5 1116 aaKnown RBP21.9■■□□□ 1.1
SHISA4-201ENST00000362011 NAGPAQ9UK23 515 aa21.9■■□□□ 1.1
SHISA4-201ENST00000362011 PCDHB12Q9Y5F1 795 aa21.9■■□□□ 1.1
SHISA4-201ENST00000362011 ADGRG1Q9Y653 693 aa21.9■■□□□ 1.1
SHISA4-201ENST00000362011 ZNF263O14978 683 aa21.89■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms