RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 PRAMEF18Q5VWM3 479 aa14.55□□□□□ -0.08
COL6A1-201ENST00000361866 POU5F2Q8N7G0 328 aa14.55□□□□□ -0.08
COL6A1-201ENST00000361866 FAM49AQ9H0Q0 323 aaPredicted RBP14.55□□□□□ -0.08
COL6A1-201ENST00000361866 LGR5O75473 907 aa14.54□□□□□ -0.08
COL6A1-201ENST00000361866 SLC4A1P02730 911 aa14.54□□□□□ -0.08
COL6A1-201ENST00000361866 CACNA2D1P54289 1103 aa14.54□□□□□ -0.08
COL6A1-201ENST00000361866 DRG2P55039 364 aaKnown RBP14.54□□□□□ -0.08
COL6A1-201ENST00000361866 TFDP3Q5H9I0 405 aa14.54□□□□□ -0.08
COL6A1-201ENST00000361866 FSCBQ5H9T9 825 aa14.54□□□□□ -0.08
COL6A1-201ENST00000361866 OLFML2BQ68BL8 750 aa14.54□□□□□ -0.08
COL6A1-201ENST00000361866 PID1Q7Z2X4 250 aa14.54□□□□□ -0.08
COL6A1-201ENST00000361866 LRRC71Q8N4P6 559 aa14.54□□□□□ -0.08
COL6A1-201ENST00000361866 PCDHB18PQ96TA0 734 aa14.54□□□□□ -0.08
COL6A1-201ENST00000361866 DDX50Q9BQ39 737 aaKnown RBP14.54□□□□□ -0.08
COL6A1-201ENST00000361866 C12orf65Q9H3J6 166 aaKnown RBP14.54□□□□□ -0.08
COL6A1-201ENST00000361866 BTNL10A8MVZ5 291 aa14.54□□□□□ -0.08
COL6A1-201ENST00000361866 F8VP50 259 aa14.54□□□□□ -0.08
COL6A1-201ENST00000361866 ANKRD20A4Q4UJ75 823 aa14.54□□□□□ -0.08
COL6A1-201ENST00000361866 SCG3Q8WXD2 468 aaKnown RBP14.54□□□□□ -0.08
COL6A1-201ENST00000361866 MRPL4Q9BYD3 311 aaKnown RBP14.54□□□□□ -0.08
COL6A1-201ENST00000361866 GPATCH2LQ9NWQ4 482 aa14.54□□□□□ -0.08
COL6A1-201ENST00000361866 PSTPIP1O43586 416 aa14.54□□□□□ -0.08
COL6A1-201ENST00000361866 PTDSS1P48651 473 aaKnown RBP14.54□□□□□ -0.08
COL6A1-201ENST00000361866 HMGCS2P54868 508 aa14.54□□□□□ -0.08
COL6A1-201ENST00000361866 EMC2Q15006 297 aa14.54□□□□□ -0.08
COL6A1-201ENST00000361866 DNAL1Q4LDG9 190 aa14.54□□□□□ -0.08
COL6A1-201ENST00000361866 RASGEF1CQ8N431 466 aa14.54□□□□□ -0.08
COL6A1-201ENST00000361866 FHDC1Q9C0D6 1143 aaPredicted RBP14.54□□□□□ -0.08
COL6A1-201ENST00000361866 MTMR12Q9C0I1 747 aa14.54□□□□□ -0.08
COL6A1-201ENST00000361866 PIH1D1Q9NWS0 290 aaKnown RBP14.54□□□□□ -0.08
COL6A1-201ENST00000361866 NFAT5O94916 1531 aa14.54□□□□□ -0.08
COL6A1-201ENST00000361866 DYNC1I2Q13409 638 aaKnown RBP14.53□□□□□ -0.08
COL6A1-201ENST00000361866 CRELD2Q6UXH1 353 aaPredicted RBP14.53□□□□□ -0.08
COL6A1-201ENST00000361866 SPOCD1Q6ZMY3 1216 aa14.53□□□□□ -0.08
COL6A1-201ENST00000361866 EXD1Q8NHP7 514 aa14.53□□□□□ -0.08
COL6A1-201ENST00000361866 ETNPPLQ8TBG4 499 aa14.53□□□□□ -0.08
COL6A1-201ENST00000361866 PGBD4Q96DM1 585 aa14.53□□□□□ -0.08
COL6A1-201ENST00000361866 WRNIP1Q96S55 665 aa14.53□□□□□ -0.08
COL6A1-201ENST00000361866 R3HDM2Q9Y2K5 976 aaKnown RBP14.53□□□□□ -0.08
COL6A1-201ENST00000361866 FCHO1O14526 889 aa14.53□□□□□ -0.08
COL6A1-201ENST00000361866 FMO1Q01740 532 aa14.53□□□□□ -0.08
COL6A1-201ENST00000361866 SURF1Q15526 300 aa14.53□□□□□ -0.08
COL6A1-201ENST00000361866 XKR3Q5GH77 459 aa14.53□□□□□ -0.08
COL6A1-201ENST00000361866 ZCCHC23Q6ZST2 131 aa14.53□□□□□ -0.08
COL6A1-201ENST00000361866 KDELC2Q7Z4H8 507 aa14.53□□□□□ -0.08
COL6A1-201ENST00000361866 ART4Q93070 314 aa14.53□□□□□ -0.08
COL6A1-201ENST00000361866 TMA16Q96EY4 203 aaKnown RBP14.53□□□□□ -0.08
COL6A1-201ENST00000361866 HIC2Q96JB3 615 aa14.53□□□□□ -0.08
COL6A1-201ENST00000361866 WDR18Q9BV38 432 aa14.53□□□□□ -0.08
COL6A1-201ENST00000361866 SNX25Q9H3E2 840 aa14.53□□□□□ -0.08
COL6A1-201ENST00000361866 FAM49BQ9NUQ9 324 aa14.53□□□□□ -0.08
COL6A1-201ENST00000361866 CNTNAP4Q9C0A0 1308 aa14.53□□□□□ -0.08
COL6A1-201ENST00000361866 DNALI1O14645 258 aaPredicted RBP14.53□□□□□ -0.08
COL6A1-201ENST00000361866 ADRB2P07550 413 aa14.53□□□□□ -0.08
COL6A1-201ENST00000361866 ADORA2BP29275 332 aa14.53□□□□□ -0.08
COL6A1-201ENST00000361866 ELK3P41970 407 aa14.53□□□□□ -0.08
COL6A1-201ENST00000361866 ACTR2P61160 394 aa14.53□□□□□ -0.08
COL6A1-201ENST00000361866 PRAMEP78395 509 aa14.53□□□□□ -0.08
COL6A1-201ENST00000361866 CYP24A1Q07973 514 aa14.53□□□□□ -0.08
COL6A1-201ENST00000361866 SCUBE1Q8IWY4 988 aa14.53□□□□□ -0.08
COL6A1-201ENST00000361866 MOV10L1Q9BXT6 1211 aaKnown RBP14.53□□□□□ -0.08
COL6A1-201ENST00000361866 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP14.53□□□□□ -0.08
COL6A1-201ENST00000361866 ZNF711Q9Y462 761 aa14.53□□□□□ -0.08
COL6A1-201ENST00000361866 A0A1W2PPM1 405 aa14.52□□□□□ -0.08
COL6A1-201ENST00000361866 APOL1O14791 398 aa14.52□□□□□ -0.08
COL6A1-201ENST00000361866 EXTL3O43909 919 aa14.52□□□□□ -0.08
COL6A1-201ENST00000361866 AP1G2O75843 785 aa14.52□□□□□ -0.08
COL6A1-201ENST00000361866 SEC24DO94855 1032 aaPredicted RBP14.52□□□□□ -0.08
COL6A1-201ENST00000361866 ACADSP16219 412 aa14.52□□□□□ -0.08
COL6A1-201ENST00000361866 AGAP1Q9UPQ3 857 aa14.52□□□□□ -0.08
COL6A1-201ENST00000361866 KRT36O76013 467 aa14.52□□□□□ -0.08
COL6A1-201ENST00000361866 IL1R1P14778 569 aa14.52□□□□□ -0.08
COL6A1-201ENST00000361866 STX1BP61266 288 aa14.52□□□□□ -0.08
COL6A1-201ENST00000361866 IL1RL1Q01638 556 aa14.52□□□□□ -0.08
COL6A1-201ENST00000361866 MORF4L2Q15014 288 aa14.52□□□□□ -0.08
COL6A1-201ENST00000361866 ZBTB45Q96K62 511 aaPredicted RBP14.52□□□□□ -0.08
COL6A1-201ENST00000361866 OLFM3Q96PB7 478 aa14.52□□□□□ -0.08
COL6A1-201ENST00000361866 EFHD1Q9BUP0 239 aa14.52□□□□□ -0.08
COL6A1-201ENST00000361866 FBXO6Q9NRD1 293 aaPredicted RBP14.52□□□□□ -0.08
COL6A1-201ENST00000361866 CSADQ9Y600 493 aa14.52□□□□□ -0.08
COL6A1-201ENST00000361866 RGPD8O14715 1765 aaPredicted RBP14.52□□□□□ -0.08
COL6A1-201ENST00000361866 NID2Q14112 1375 aa14.52□□□□□ -0.08
COL6A1-201ENST00000361866 FRMPD4Q14CM0 1322 aa14.52□□□□□ -0.09
COL6A1-201ENST00000361866 MAGEA13PA6NCF6 341 aa14.52□□□□□ -0.09
COL6A1-201ENST00000361866 MEI4A8MW99 385 aa14.52□□□□□ -0.09
COL6A1-201ENST00000361866 MARSP56192 900 aaKnown RBP14.52□□□□□ -0.09
COL6A1-201ENST00000361866 GABPAQ06546 454 aa14.52□□□□□ -0.09
COL6A1-201ENST00000361866 NME3Q13232 169 aa14.52□□□□□ -0.09
COL6A1-201ENST00000361866 APOBEC3HQ6NTF7 200 aaKnown RBP14.52□□□□□ -0.09
COL6A1-201ENST00000361866 ZNF606Q8WXB4 792 aa14.52□□□□□ -0.09
COL6A1-201ENST00000361866 NMD3Q96D46 503 aaKnown RBP14.52□□□□□ -0.09
COL6A1-201ENST00000361866 MRPL46Q9H2W6 279 aaKnown RBP14.52□□□□□ -0.09
COL6A1-201ENST00000361866 EME2A4GXA9 379 aaPredicted RBP14.52□□□□□ -0.09
COL6A1-201ENST00000361866 NLRP11P59045 1033 aaKnown RBP14.52□□□□□ -0.09
COL6A1-201ENST00000361866 KCTD2Q14681 263 aa14.52□□□□□ -0.09
COL6A1-201ENST00000361866 HABP4Q5JVS0 413 aaKnown RBP14.52□□□□□ -0.09
COL6A1-201ENST00000361866 ZNF677Q86XU0 584 aa14.52□□□□□ -0.09
COL6A1-201ENST00000361866 THEGQ9P2T0 379 aa14.52□□□□□ -0.09
COL6A1-201ENST00000361866 AKAP12Q02952 1782 aa14.51□□□□□ -0.09
COL6A1-201ENST00000361866 RNF103-CHMP3A0A140T963 221 aa14.51□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms