RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 EXTL3O43909 919 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 H2AFYO75367 372 aaKnown RBP14.54□□□□□ -0.08
SMC5-201ENST00000361138 FAM58BPP0C7Q3 252 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 FGFR2P21802 821 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 CIITAP33076 1130 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 RBBP7Q16576 425 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 TRIM16LQ309B1 348 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 MAML3Q96JK9 1138 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 C2orf40Q9H1Z8 148 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 EPHB6O15197 1021 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 KLRC4O43908 158 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 SERPINB8P50452 374 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 NCALDP61601 193 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 RRP1BQ14684 758 aaKnown RBP14.54□□□□□ -0.08
SMC5-201ENST00000361138 PKN2Q16513 984 aaKnown RBP14.54□□□□□ -0.08
SMC5-201ENST00000361138 CYP4A22Q5TCH4 519 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 TCP10LQ8TDR4 215 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 VPS33BQ9H267 617 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 C10orf88Q9H8K7 445 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 MEI4A8MW99 385 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 KRT8P05787 483 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 PDGFRAP16234 1089 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 IYDQ6PHW0 289 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 METTL23Q86XA0 190 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 PCYOX1LQ8NBM8 494 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 SH2D3AQ9BRG2 576 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 IL17AQ16552 155 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 THEMIS2Q5TEJ8 643 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 GPAT2Q6NUI2 795 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 FRA10AC1Q70Z53 315 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 GORASP1Q9BQQ3 440 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 C1orf167Q5SNV9 1468 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 PROSCO94903 275 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 RPA3P35244 121 aaPredicted RBP14.54□□□□□ -0.08
SMC5-201ENST00000361138 USP10Q14694 798 aaKnown RBP14.54□□□□□ -0.08
SMC5-201ENST00000361138 SPOCD1Q6ZMY3 1216 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 LDHDQ86WU2 507 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 PLD3Q8IV08 490 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 BAP1Q92560 729 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 BLOC1S6Q9UL45 172 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 DAGLAQ9Y4D2 1042 aa14.54□□□□□ -0.08
SMC5-201ENST00000361138 ZBTB39O15060 712 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 POLBP06746 335 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 TBL3Q12788 808 aaKnown RBP14.53□□□□□ -0.08
SMC5-201ENST00000361138 NME3Q13232 169 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 TMTC4Q5T4D3 741 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 CLEC4FQ8N1N0 589 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 CNKSR1Q969H4 720 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 TMEM121Q9BTD3 319 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 SLC12A6Q9UHW9 1150 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 ATP8B3O60423 1300 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 ALADP13716 330 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 HNRNPH3P31942 346 aaKnown RBP14.53□□□□□ -0.08
SMC5-201ENST00000361138 SGSM1Q2NKQ1 1148 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 MOXD1Q6UVY6 613 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 SLC45A4Q5BKX6 768 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 EEPD1Q7L9B9 569 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 PRUNE1Q86TP1 453 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 PPHLN1Q8NEY8 458 aaKnown RBP14.53□□□□□ -0.08
SMC5-201ENST00000361138 TBRG4Q969Z0 631 aaKnown RBP eCLIP14.53□□□□□ -0.08
SMC5-201ENST00000361138 FAM210AQ96ND0 272 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 DNAJC18Q9H819 358 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 DDX18Q9NVP1 670 aaKnown RBP14.53□□□□□ -0.08
SMC5-201ENST00000361138 NOD1Q9Y239 953 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 CSADQ9Y600 493 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 CASZ1Q86V15 1759 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 DNALI1O14645 258 aaPredicted RBP14.53□□□□□ -0.08
SMC5-201ENST00000361138 STIP1P31948 543 aaKnown RBP14.53□□□□□ -0.08
SMC5-201ENST00000361138 RIPK1Q13546 671 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 STXBP2Q15833 593 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 C4orf50Q6ZRC1 276 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 SLC26A11Q86WA9 606 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 SULF1Q8IWU6 871 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 NUP93Q8N1F7 819 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 APOPT1Q96IL0 206 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 NYAP2Q9P242 653 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 PCYOX1Q9UHG3 505 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 STAP1Q9ULZ2 295 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 SATB2Q9UPW6 733 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 NTSR2O95665 410 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 RAG1P15918 1043 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 CAPRIN1Q14444 709 aaKnown RBP14.53□□□□□ -0.08
SMC5-201ENST00000361138 COG2Q14746 738 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 NSUN6Q8TEA1 469 aaKnown RBP14.53□□□□□ -0.08
SMC5-201ENST00000361138 ELMO2Q96JJ3 720 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 CNDP1Q96KN2 507 aa14.53□□□□□ -0.08
SMC5-201ENST00000361138 FER1L4A9Z1Z3 1794 aa14.52□□□□□ -0.08
SMC5-201ENST00000361138 ARHGEF37A1IGU5 675 aa14.52□□□□□ -0.08
SMC5-201ENST00000361138 MMP13P45452 471 aa14.52□□□□□ -0.08
SMC5-201ENST00000361138 ABCE1P61221 599 aaKnown RBP14.52□□□□□ -0.08
SMC5-201ENST00000361138 CUL2Q13617 745 aa14.52□□□□□ -0.08
SMC5-201ENST00000361138 Q4G0T1 1027 aa14.52□□□□□ -0.08
SMC5-201ENST00000361138 AADACL2Q6P093 401 aa14.52□□□□□ -0.08
SMC5-201ENST00000361138 SCFD2Q8WU76 684 aa14.52□□□□□ -0.08
SMC5-201ENST00000361138 ART4Q93070 314 aa14.52□□□□□ -0.08
SMC5-201ENST00000361138 TBC1D10AQ9BXI6 508 aa14.52□□□□□ -0.08
SMC5-201ENST00000361138 HSD3B7Q9H2F3 369 aa14.52□□□□□ -0.08
SMC5-201ENST00000361138 TBX20Q9UMR3 447 aa14.52□□□□□ -0.08
SMC5-201ENST00000361138 JCADQ9P266 1359 aa14.52□□□□□ -0.08
SMC5-201ENST00000361138 AP3B1O00203 1094 aa14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms