RNA–Protein interactions for RNA: ENST00000361055.8

UBA3-202, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene UBA3, Length 2,154 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-202ENST00000361055 ELNP15502 786 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 ELF1P32519 619 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 CETN2P41208 172 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 PRKCEQ02156 737 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 CACNB2Q08289 660 aaPredicted RBP13.1□□□□□ -0.31
UBA3-202ENST00000361055 STRN3Q13033 797 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 PSMD6Q15008 389 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 ZACNQ401N2 412 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 XKR3Q5GH77 459 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 TLDC1Q6P9B6 456 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 PLPPR4Q7Z2D5 763 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 ANKS1BQ7Z6G8 1248 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 MCPH1Q8NEM0 835 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 TRPV1Q8NER1 839 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 AFG1LQ8WV93 481 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 MAML1Q92585 1016 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 CEP170P1Q96L14 293 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 FAM213AQ9BRX8 229 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 HEMGNQ9BXL5 484 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 UBN1Q9NPG3 1134 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 ARHGEF3Q9NR81 526 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 CTNNAL1Q9UBT7 734 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 EPB41L3Q9Y2J2 1087 aaPredicted RBP13.1□□□□□ -0.31
UBA3-202ENST00000361055 TRIM17Q9Y577 477 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 UMODL1Q5DID0 1318 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 CENPFP49454 3210 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 MAGEB2O15479 319 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 CALCAP01258 141 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 KLRC2P26717 231 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 SLC26A2P50443 739 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 SLC18A1P54219 525 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 CCDC15Q0P6D6 951 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 MKRN4PQ13434 485 aaPredicted RBP13.1□□□□□ -0.31
UBA3-202ENST00000361055 MAMLD1Q13495 774 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 MTFR1Q15390 333 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 IZUMO3Q5VZ72 239 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 PLEKHA7Q6IQ23 1121 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 DRICH1Q6PGQ1 229 aaPredicted RBP13.1□□□□□ -0.31
UBA3-202ENST00000361055 TRMT1LQ7Z2T5 733 aaKnown RBP13.1□□□□□ -0.31
UBA3-202ENST00000361055 TLK2Q86UE8 772 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 PHF13Q86YI8 300 aaPredicted RBP13.1□□□□□ -0.31
UBA3-202ENST00000361055 RCOR2Q8IZ40 523 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 ZCCHC9Q8N567 271 aaKnown RBP13.1□□□□□ -0.31
UBA3-202ENST00000361055 TGS1Q96RS0 853 aaKnown RBP13.1□□□□□ -0.31
UBA3-202ENST00000361055 SMARCAD1Q9H4L7 1026 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 EBF2Q9HAK2 575 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 KLHL14Q9P2G3 628 aa13.1□□□□□ -0.31
UBA3-202ENST00000361055 HNRNPDLO14979 420 aaKnown RBP13.09□□□□□ -0.31
UBA3-202ENST00000361055 SEPT4O43236 478 aa13.09□□□□□ -0.31
UBA3-202ENST00000361055 DYNC1LI2O43237 492 aaPredicted RBP13.09□□□□□ -0.31
UBA3-202ENST00000361055 DGAT1O75907 488 aa13.09□□□□□ -0.31
UBA3-202ENST00000361055 OATP04181 439 aa13.09□□□□□ -0.31
UBA3-202ENST00000361055 MMP3P08254 477 aa13.09□□□□□ -0.31
UBA3-202ENST00000361055 ATP4AP20648 1035 aa13.09□□□□□ -0.31
UBA3-202ENST00000361055 ACO1P21399 889 aaKnown RBP13.09□□□□□ -0.31
UBA3-202ENST00000361055 SKIV2L2P42285 1042 aaKnown RBP13.09□□□□□ -0.31
UBA3-202ENST00000361055 MAGEA4P43358 317 aa13.09□□□□□ -0.31
UBA3-202ENST00000361055 IL9RQ01113 521 aa13.09□□□□□ -0.31
UBA3-202ENST00000361055 TRIM32Q13049 653 aa13.09□□□□□ -0.31
UBA3-202ENST00000361055 E2F5Q15329 346 aa13.09□□□□□ -0.31
UBA3-202ENST00000361055 ASRGL1Q7L266 308 aa13.09□□□□□ -0.31
UBA3-202ENST00000361055 TDRPQ86YL5 185 aa13.09□□□□□ -0.31
UBA3-202ENST00000361055 SLAIN1Q8ND83 568 aa13.09□□□□□ -0.31
UBA3-202ENST00000361055 KCNN1Q92952 543 aa13.09□□□□□ -0.31
UBA3-202ENST00000361055 ELMO3Q96BJ8 720 aa13.09□□□□□ -0.31
UBA3-202ENST00000361055 KLHL29Q96CT2 875 aa13.09□□□□□ -0.31
UBA3-202ENST00000361055 CFAP57Q96MR6 1250 aa13.09□□□□□ -0.31
UBA3-202ENST00000361055 DNAJC17Q9NVM6 304 aaKnown RBP13.09□□□□□ -0.31
UBA3-202ENST00000361055 ADAM22Q9P0K1 906 aa13.09□□□□□ -0.31
UBA3-202ENST00000361055 CNTN6Q9UQ52 1028 aa13.09□□□□□ -0.31
UBA3-202ENST00000361055 STYXL1Q9Y6J8 313 aa13.09□□□□□ -0.31
UBA3-202ENST00000361055 SCINQ9Y6U3 715 aa13.09□□□□□ -0.31
UBA3-202ENST00000361055 A6NJR5 290 aa13.08□□□□□ -0.31
UBA3-202ENST00000361055 DUSP11O75319 330 aaKnown RBP13.08□□□□□ -0.31
UBA3-202ENST00000361055 HLA-DRAP01903 254 aa13.08□□□□□ -0.31
UBA3-202ENST00000361055 HOXD8P13378 290 aaPredicted RBP13.08□□□□□ -0.31
UBA3-202ENST00000361055 PRKAR2AP13861 404 aaKnown RBP13.08□□□□□ -0.31
UBA3-202ENST00000361055 TAC1P20366 129 aa13.08□□□□□ -0.31
UBA3-202ENST00000361055 TAS2R40P59535 323 aa13.08□□□□□ -0.31
UBA3-202ENST00000361055 KCNJ2P63252 427 aa13.08□□□□□ -0.31
UBA3-202ENST00000361055 C1QBPQ07021 282 aaKnown RBP13.08□□□□□ -0.31
UBA3-202ENST00000361055 DGKDQ16760 1214 aa13.08□□□□□ -0.31
UBA3-202ENST00000361055 MAP3K21Q5TCX8 1036 aa13.08□□□□□ -0.31
UBA3-202ENST00000361055 FITM2Q8N6M3 262 aa13.08□□□□□ -0.31
UBA3-202ENST00000361055 GDAP1Q8TB36 358 aa13.08□□□□□ -0.31
UBA3-202ENST00000361055 FAM167AQ96KS9 214 aa13.08□□□□□ -0.31
UBA3-202ENST00000361055 PWWP2AQ96N64 755 aa13.08□□□□□ -0.31
UBA3-202ENST00000361055 FNBP1Q96RU3 617 aa13.08□□□□□ -0.31
UBA3-202ENST00000361055 RBM15Q96T37 977 aaKnown RBP eCLIP13.08□□□□□ -0.31
UBA3-202ENST00000361055 AP5M1Q9H0R1 490 aa13.08□□□□□ -0.31
UBA3-202ENST00000361055 NRBP2Q9NSY0 501 aa13.08□□□□□ -0.31
UBA3-202ENST00000361055 ARHGAP28Q9P2N2 729 aa13.08□□□□□ -0.31
UBA3-202ENST00000361055 SEPT9Q9UHD8 586 aaPredicted RBP13.08□□□□□ -0.31
UBA3-202ENST00000361055 DRG1Q9Y295 367 aaKnown RBP13.08□□□□□ -0.31
UBA3-202ENST00000361055 FAM47DPA6NHR8 397 aa13.08□□□□□ -0.32
UBA3-202ENST00000361055 LGALS2P05162 132 aa13.08□□□□□ -0.32
UBA3-202ENST00000361055 CCND1P24385 295 aa13.08□□□□□ -0.32
UBA3-202ENST00000361055 CPT1AP50416 773 aa13.08□□□□□ -0.32
UBA3-202ENST00000361055 NOMO3P69849 1222 aa13.08□□□□□ -0.32
UBA3-202ENST00000361055 CCDC142Q17RM4 750 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms