RNA–Protein interactions for RNA: ENST00000359683.8

NIF3L1-201, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 1 (best) BASIC

Gene NIF3L1, Length 1,626 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-201ENST00000359683 DPEP3Q9H4B8 488 aa13.21□□□□□ -0.29
NIF3L1-201ENST00000359683 NGRNQ9NPE2 291 aaKnown RBP13.21□□□□□ -0.29
NIF3L1-201ENST00000359683 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.21□□□□□ -0.29
NIF3L1-201ENST00000359683 FNIP2Q9P278 1114 aa13.21□□□□□ -0.29
NIF3L1-201ENST00000359683 KIAA1257Q9ULG3 409 aa13.21□□□□□ -0.29
NIF3L1-201ENST00000359683 CHD7Q9P2D1 2997 aa13.21□□□□□ -0.29
NIF3L1-201ENST00000359683 AKR1B15C9JRZ8 316 aaPredicted RBP13.21□□□□□ -0.3
NIF3L1-201ENST00000359683 C2CD2LO14523 706 aa13.21□□□□□ -0.3
NIF3L1-201ENST00000359683 ATP2C2O75185 946 aa13.21□□□□□ -0.3
NIF3L1-201ENST00000359683 GFPT2O94808 682 aa13.21□□□□□ -0.3
NIF3L1-201ENST00000359683 HNRNPH3P31942 346 aaKnown RBP13.21□□□□□ -0.3
NIF3L1-201ENST00000359683 USP8P40818 1118 aa13.21□□□□□ -0.3
NIF3L1-201ENST00000359683 BPIFB4P59827 614 aa13.21□□□□□ -0.3
NIF3L1-201ENST00000359683 INTS6LQ5JSJ4 861 aaKnown RBP13.21□□□□□ -0.3
NIF3L1-201ENST00000359683 SFMBT2Q5VUG0 894 aa13.21□□□□□ -0.3
NIF3L1-201ENST00000359683 SLC8B1Q6J4K2 584 aa13.21□□□□□ -0.3
NIF3L1-201ENST00000359683 ACOT1Q86TX2 421 aa13.21□□□□□ -0.3
NIF3L1-201ENST00000359683 LRRTM3Q86VH5 581 aa13.21□□□□□ -0.3
NIF3L1-201ENST00000359683 TC2NQ8N9U0 490 aa13.21□□□□□ -0.3
NIF3L1-201ENST00000359683 SPC24Q8NBT2 197 aa13.21□□□□□ -0.3
NIF3L1-201ENST00000359683 B3GALNT2Q8NCR0 500 aa13.21□□□□□ -0.3
NIF3L1-201ENST00000359683 OR8K1Q8NGG5 319 aa13.21□□□□□ -0.3
NIF3L1-201ENST00000359683 AUTS2Q8WXX7 1259 aa13.21□□□□□ -0.3
NIF3L1-201ENST00000359683 PPM1EQ8WY54 764 aa13.21□□□□□ -0.3
NIF3L1-201ENST00000359683 TMEM209Q96SK2 561 aa13.21□□□□□ -0.3
NIF3L1-201ENST00000359683 DNAJC7Q99615 494 aa13.21□□□□□ -0.3
NIF3L1-201ENST00000359683 TCF25Q9BQ70 676 aa13.21□□□□□ -0.3
NIF3L1-201ENST00000359683 SYT15Q9BQS2 421 aa13.21□□□□□ -0.3
NIF3L1-201ENST00000359683 CLSTN3Q9BQT9 956 aa13.21□□□□□ -0.3
NIF3L1-201ENST00000359683 DNAI2Q9GZS0 605 aa13.21□□□□□ -0.3
NIF3L1-201ENST00000359683 CRTAC1Q9NQ79 661 aa13.21□□□□□ -0.3
NIF3L1-201ENST00000359683 MYBPHLA2RUH7 354 aa13.2□□□□□ -0.3
NIF3L1-201ENST00000359683 LPXNO60711 386 aa13.2□□□□□ -0.3
NIF3L1-201ENST00000359683 MFAP3LO75121 409 aa13.2□□□□□ -0.3
NIF3L1-201ENST00000359683 VDRP11473 427 aa13.2□□□□□ -0.3
NIF3L1-201ENST00000359683 FERP16591 822 aa13.2□□□□□ -0.3
NIF3L1-201ENST00000359683 ADKP55263 362 aaKnown RBP13.2□□□□□ -0.3
NIF3L1-201ENST00000359683 TSPY1Q01534 308 aa13.2□□□□□ -0.3
NIF3L1-201ENST00000359683 CREMQ03060 361 aa13.2□□□□□ -0.3
NIF3L1-201ENST00000359683 PTK2Q05397 1052 aa13.2□□□□□ -0.3
NIF3L1-201ENST00000359683 ORC1Q13415 861 aa13.2□□□□□ -0.3
NIF3L1-201ENST00000359683 SMC1AQ14683 1233 aaKnown RBP13.2□□□□□ -0.3
NIF3L1-201ENST00000359683 E4F1Q66K89 784 aaPredicted RBP13.2□□□□□ -0.3
NIF3L1-201ENST00000359683 CNGA4Q8IV77 575 aa13.2□□□□□ -0.3
NIF3L1-201ENST00000359683 MYCBPAPQ8TBZ2 947 aa13.2□□□□□ -0.3
NIF3L1-201ENST00000359683 PDLIM2Q96JY6 352 aa13.2□□□□□ -0.3
NIF3L1-201ENST00000359683 HEXIM2Q96MH2 286 aaKnown RBP13.2□□□□□ -0.3
NIF3L1-201ENST00000359683 PRDM6Q9NQX0 595 aa13.2□□□□□ -0.3
NIF3L1-201ENST00000359683 GTF3C4Q9UKN8 822 aa13.2□□□□□ -0.3
NIF3L1-201ENST00000359683 COL4A4P53420 1690 aaPredicted RBP13.19□□□□□ -0.3
NIF3L1-201ENST00000359683 C2orf71A6NGG8 1288 aa13.19□□□□□ -0.3
NIF3L1-201ENST00000359683 RFXAPO00287 272 aa13.19□□□□□ -0.3
NIF3L1-201ENST00000359683 TEX28O15482 410 aa13.19□□□□□ -0.3
NIF3L1-201ENST00000359683 ADAM12O43184 909 aa13.19□□□□□ -0.3
NIF3L1-201ENST00000359683 CNPP09543 421 aaKnown RBP13.19□□□□□ -0.3
NIF3L1-201ENST00000359683 CCDC172P0C7W6 258 aa13.19□□□□□ -0.3
NIF3L1-201ENST00000359683 RPL17P18621 184 aaKnown RBP13.19□□□□□ -0.3
NIF3L1-201ENST00000359683 IRS1P35568 1242 aa13.19□□□□□ -0.3
NIF3L1-201ENST00000359683 PRKCIP41743 596 aa13.19□□□□□ -0.3
NIF3L1-201ENST00000359683 PSMC1P62191 440 aaKnown RBP13.19□□□□□ -0.3
NIF3L1-201ENST00000359683 GOLGA8FQ08AF8 430 aa13.19□□□□□ -0.3
NIF3L1-201ENST00000359683 GOLGA8DPQ0D2H9 430 aa13.19□□□□□ -0.3
NIF3L1-201ENST00000359683 GPR17Q13304 367 aa13.19□□□□□ -0.3
NIF3L1-201ENST00000359683 RAB33AQ14088 237 aa13.19□□□□□ -0.3
NIF3L1-201ENST00000359683 ADGRE1Q14246 886 aa13.19□□□□□ -0.3
NIF3L1-201ENST00000359683 MAPRE1Q15691 268 aaKnown RBP13.19□□□□□ -0.3
NIF3L1-201ENST00000359683 SLC47A2Q86VL8 602 aa13.19□□□□□ -0.3
NIF3L1-201ENST00000359683 DCP1BQ8IZD4 617 aaKnown RBP13.19□□□□□ -0.3
NIF3L1-201ENST00000359683 C12orf29Q8N999 325 aa13.19□□□□□ -0.3
NIF3L1-201ENST00000359683 MICAL1Q8TDZ2 1067 aa13.19□□□□□ -0.3
NIF3L1-201ENST00000359683 ZNF606Q8WXB4 792 aa13.19□□□□□ -0.3
NIF3L1-201ENST00000359683 TFAP2BQ92481 460 aa13.19□□□□□ -0.3
NIF3L1-201ENST00000359683 KLHL5Q96PQ7 755 aa13.19□□□□□ -0.3
NIF3L1-201ENST00000359683 LPIN3Q9BQK8 851 aa13.19□□□□□ -0.3
NIF3L1-201ENST00000359683 ZSWIM1Q9BR11 485 aa13.19□□□□□ -0.3
NIF3L1-201ENST00000359683 ACP6Q9NPH0 428 aa13.19□□□□□ -0.3
NIF3L1-201ENST00000359683 ENTPD7Q9NQZ7 604 aa13.19□□□□□ -0.3
NIF3L1-201ENST00000359683 TMLHEQ9NVH6 421 aa13.19□□□□□ -0.3
NIF3L1-201ENST00000359683 CDY1Q9Y6F8 540 aa13.19□□□□□ -0.3
NIF3L1-201ENST00000359683 MYO7AQ13402 2215 aa13.18□□□□□ -0.3
NIF3L1-201ENST00000359683 HIDE1A8MVS5 230 aa13.18□□□□□ -0.3
NIF3L1-201ENST00000359683 CALCAP01258 141 aa13.18□□□□□ -0.3
NIF3L1-201ENST00000359683 OR4Q2P0C623 313 aa13.18□□□□□ -0.3
NIF3L1-201ENST00000359683 CYP11B1P15538 503 aa13.18□□□□□ -0.3
NIF3L1-201ENST00000359683 IGFBP4P22692 258 aa13.18□□□□□ -0.3
NIF3L1-201ENST00000359683 GNA15P30679 374 aa13.18□□□□□ -0.3
NIF3L1-201ENST00000359683 OR1D2P34982 312 aa13.18□□□□□ -0.3
NIF3L1-201ENST00000359683 SMARCB1Q12824 385 aa13.18□□□□□ -0.3
NIF3L1-201ENST00000359683 CNGA2Q16280 664 aa13.18□□□□□ -0.3
NIF3L1-201ENST00000359683 ASIC2Q16515 512 aa13.18□□□□□ -0.3
NIF3L1-201ENST00000359683 CCDC142Q17RM4 750 aa13.18□□□□□ -0.3
NIF3L1-201ENST00000359683 SGO2Q562F6 1265 aa13.18□□□□□ -0.3
NIF3L1-201ENST00000359683 MDH1BQ5I0G3 518 aa13.18□□□□□ -0.3
NIF3L1-201ENST00000359683 TJAP1Q5JTD0 557 aa13.18□□□□□ -0.3
NIF3L1-201ENST00000359683 PLPP4Q5VZY2 271 aa13.18□□□□□ -0.3
NIF3L1-201ENST00000359683 ARHGAP17Q68EM7 881 aa13.18□□□□□ -0.3
NIF3L1-201ENST00000359683 GDPD5Q8WTR4 605 aa13.18□□□□□ -0.3
NIF3L1-201ENST00000359683 DDX1Q92499 740 aaKnown RBP13.18□□□□□ -0.3
NIF3L1-201ENST00000359683 CYFIP2Q96F07 1278 aa13.18□□□□□ -0.3
NIF3L1-201ENST00000359683 HNRNPABQ99729 332 aaKnown RBP13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms