RNA–Protein interactions for RNA: ENST00000359551.6

SHARPIN-201, Transcript of SHANK associated RH domain interactor, humanhuman

TSL 1 (best)

Gene SHARPIN, Length 1,687 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-201ENST00000359551 CPA5Q8WXQ8 436 aa26.39■■□□□ 1.82
SHARPIN-201ENST00000359551 TSPAN16Q9UKR8 245 aa26.39■■□□□ 1.82
SHARPIN-201ENST00000359551 CDH9Q9ULB4 789 aa26.39■■□□□ 1.82
SHARPIN-201ENST00000359551 GUCA1BQ9UMX6 200 aa26.39■■□□□ 1.82
SHARPIN-201ENST00000359551 CEP83Q9Y592 693 aa26.39■■□□□ 1.82
SHARPIN-201ENST00000359551 ZBBXA8MT70 800 aa26.38■■□□□ 1.81
SHARPIN-201ENST00000359551 PCSK1P29120 753 aa26.38■■□□□ 1.81
SHARPIN-201ENST00000359551 NSFP46459 744 aaKnown RBP26.38■■□□□ 1.81
SHARPIN-201ENST00000359551 HTRA4P83105 476 aaPredicted RBP26.38■■□□□ 1.81
SHARPIN-201ENST00000359551 KIAA0319Q5VV43 1072 aa26.38■■□□□ 1.81
SHARPIN-201ENST00000359551 FAM117BQ6P1L5 589 aa26.38■■□□□ 1.81
SHARPIN-201ENST00000359551 CTNNBL1Q8WYA6 563 aaPredicted RBP26.38■■□□□ 1.81
SHARPIN-201ENST00000359551 ACBD6Q9BR61 282 aa26.38■■□□□ 1.81
SHARPIN-201ENST00000359551 THAP2Q9H0W7 228 aa26.38■■□□□ 1.81
SHARPIN-201ENST00000359551 MYO1AQ9UBC5 1043 aa26.38■■□□□ 1.81
SHARPIN-201ENST00000359551 SALL4Q9UJQ4 1053 aa26.38■■□□□ 1.81
SHARPIN-201ENST00000359551 SF3B1O75533 1304 aaKnown RBP eCLIP26.38■■□□□ 1.81
SHARPIN-201ENST00000359551 GJB5O95377 273 aa26.38■■□□□ 1.81
SHARPIN-201ENST00000359551 EFEMP2O95967 443 aa26.38■■□□□ 1.81
SHARPIN-201ENST00000359551 TUBB4AP04350 444 aa26.38■■□□□ 1.81
SHARPIN-201ENST00000359551 PTPN1P18031 435 aaKnown RBP26.38■■□□□ 1.81
SHARPIN-201ENST00000359551 ACAT1P24752 427 aaKnown RBP26.38■■□□□ 1.81
SHARPIN-201ENST00000359551 TCEAL1Q15170 157 aa26.38■■□□□ 1.81
SHARPIN-201ENST00000359551 PKDCCQ504Y2 493 aa26.38■■□□□ 1.81
SHARPIN-201ENST00000359551 OVOS1Q6IE37 1185 aa26.38■■□□□ 1.81
SHARPIN-201ENST00000359551 MON1BQ7L1V2 547 aa26.38■■□□□ 1.81
SHARPIN-201ENST00000359551 RNF10Q8N5U6 811 aaKnown RBP26.38■■□□□ 1.81
SHARPIN-201ENST00000359551 C1orf131Q8NDD1 294 aaKnown RBP26.38■■□□□ 1.81
SHARPIN-201ENST00000359551 VCPIP1Q96JH7 1222 aa26.38■■□□□ 1.81
SHARPIN-201ENST00000359551 SYT15Q9BQS2 421 aa26.38■■□□□ 1.81
SHARPIN-201ENST00000359551 IRX2Q9BZI1 471 aaPredicted RBP26.38■■□□□ 1.81
SHARPIN-201ENST00000359551 RRAGDQ9NQL2 400 aaPredicted RBP26.38■■□□□ 1.81
SHARPIN-201ENST00000359551 FAM49BQ9NUQ9 324 aa26.38■■□□□ 1.81
SHARPIN-201ENST00000359551 CXXC1Q9P0U4 656 aaPredicted RBP26.38■■□□□ 1.81
SHARPIN-201ENST00000359551 PTPRDP23468 1912 aa26.37■■□□□ 1.81
SHARPIN-201ENST00000359551 KIF2AO00139 706 aaPredicted RBP26.37■■□□□ 1.81
SHARPIN-201ENST00000359551 CAPN15O75808 1086 aa26.37■■□□□ 1.81
SHARPIN-201ENST00000359551 OAZ2O95190 189 aa26.37■■□□□ 1.81
SHARPIN-201ENST00000359551 ABCB4P21439 1286 aa26.37■■□□□ 1.81
SHARPIN-201ENST00000359551 ALDH7A1P49419 539 aaKnown RBP26.37■■□□□ 1.81
SHARPIN-201ENST00000359551 ETF1P62495 437 aaKnown RBP26.37■■□□□ 1.81
SHARPIN-201ENST00000359551 ELAVL2Q12926 359 aaKnown RBP26.37■■□□□ 1.81
SHARPIN-201ENST00000359551 PTP4A2Q12974 167 aa26.37■■□□□ 1.81
SHARPIN-201ENST00000359551 BTG3Q14201 252 aaPredicted RBP26.37■■□□□ 1.81
SHARPIN-201ENST00000359551 GOLGA7BQ2TAP0 167 aa26.37■■□□□ 1.81
SHARPIN-201ENST00000359551 FUT10Q6P4F1 479 aa26.37■■□□□ 1.81
SHARPIN-201ENST00000359551 TMEM173Q86WV6 379 aaPredicted RBP26.37■■□□□ 1.81
SHARPIN-201ENST00000359551 MCOLN2Q8IZK6 566 aa26.37■■□□□ 1.81
SHARPIN-201ENST00000359551 TRIM11Q96F44 468 aa26.37■■□□□ 1.81
SHARPIN-201ENST00000359551 LPIN3Q9BQK8 851 aa26.37■■□□□ 1.81
SHARPIN-201ENST00000359551 GPR62Q9BZJ7 368 aa26.37■■□□□ 1.81
SHARPIN-201ENST00000359551 CRTAC1Q9NQ79 661 aa26.37■■□□□ 1.81
SHARPIN-201ENST00000359551 GTF3C4Q9UKN8 822 aa26.37■■□□□ 1.81
SHARPIN-201ENST00000359551 NLRC5Q86WI3 1866 aa26.37■■□□□ 1.81
SHARPIN-201ENST00000359551 CARNS1A5YM72 827 aa26.36■■□□□ 1.81
SHARPIN-201ENST00000359551 M0QYV0 167 aa26.36■■□□□ 1.81
SHARPIN-201ENST00000359551 KIF5CO60282 957 aa26.36■■□□□ 1.81
SHARPIN-201ENST00000359551 ATP2C2O75185 946 aa26.36■■□□□ 1.81
SHARPIN-201ENST00000359551 MMP8P22894 467 aa26.36■■□□□ 1.81
SHARPIN-201ENST00000359551 GPD2P43304 727 aa26.36■■□□□ 1.81
SHARPIN-201ENST00000359551 PSMC1P62191 440 aaKnown RBP26.36■■□□□ 1.81
SHARPIN-201ENST00000359551 GPC5P78333 572 aa26.36■■□□□ 1.81
SHARPIN-201ENST00000359551 YWHAHQ04917 246 aaPredicted RBP26.36■■□□□ 1.81
SHARPIN-201ENST00000359551 C1QBPQ07021 282 aaKnown RBP26.36■■□□□ 1.81
SHARPIN-201ENST00000359551 BCL7CQ8WUZ0 217 aaPredicted RBP26.36■■□□□ 1.81
SHARPIN-201ENST00000359551 RFFLQ8WZ73 363 aa26.36■■□□□ 1.81
SHARPIN-201ENST00000359551 DPF3Q92784 378 aa26.36■■□□□ 1.81
SHARPIN-201ENST00000359551 HNRNPABQ99729 332 aaKnown RBP26.36■■□□□ 1.81
SHARPIN-201ENST00000359551 LBHD1Q9BQE6 289 aaPredicted RBP26.36■■□□□ 1.81
SHARPIN-201ENST00000359551 MYBL1P10243 752 aa26.35■■□□□ 1.81
SHARPIN-201ENST00000359551 FGFR3P22607 806 aa26.35■■□□□ 1.81
SHARPIN-201ENST00000359551 TKTP29401 623 aaKnown RBP26.35■■□□□ 1.81
SHARPIN-201ENST00000359551 PBX3P40426 434 aa26.35■■□□□ 1.81
SHARPIN-201ENST00000359551 TTC30AQ86WT1 665 aa26.35■■□□□ 1.81
SHARPIN-201ENST00000359551 THEM5Q8N1Q8 247 aa26.35■■□□□ 1.81
SHARPIN-201ENST00000359551 SECISBP2LQ93073 1101 aaKnown RBP26.35■■□□□ 1.81
SHARPIN-201ENST00000359551 ARHGEF26Q96DR7 871 aa26.35■■□□□ 1.81
SHARPIN-201ENST00000359551 SLC9A7Q96T83 725 aa26.35■■□□□ 1.81
SHARPIN-201ENST00000359551 YME1L1Q96TA2 773 aa26.35■■□□□ 1.81
SHARPIN-201ENST00000359551 PKMYT1Q99640 499 aa26.35■■□□□ 1.81
SHARPIN-201ENST00000359551 CYTH4Q9UIA0 394 aa26.35■■□□□ 1.81
SHARPIN-201ENST00000359551 MRPL42Q9Y6G3 142 aaKnown RBP26.35■■□□□ 1.81
SHARPIN-201ENST00000359551 MACROD2A1Z1Q3 448 aa26.34■■□□□ 1.81
SHARPIN-201ENST00000359551 NT5C1B-RDH14C9J2C7 533 aa26.34■■□□□ 1.81
SHARPIN-201ENST00000359551 CYP1A2P05177 515 aa26.34■■□□□ 1.81
SHARPIN-201ENST00000359551 CCDC130P13994 396 aa26.34■■□□□ 1.81
SHARPIN-201ENST00000359551 MRPL58Q14197 206 aaKnown RBP26.34■■□□□ 1.81
SHARPIN-201ENST00000359551 INTS6LQ5JSJ4 861 aaKnown RBP26.34■■□□□ 1.81
SHARPIN-201ENST00000359551 FAM171BQ6P995 826 aa26.34■■□□□ 1.81
SHARPIN-201ENST00000359551 KCNT2Q6UVM3 1135 aa26.34■■□□□ 1.81
SHARPIN-201ENST00000359551 PHOSPHO2Q8TCD6 241 aa26.34■■□□□ 1.81
SHARPIN-201ENST00000359551 AVENQ9NQS1 362 aaPredicted RBP26.34■■□□□ 1.81
SHARPIN-201ENST00000359551 PAXBP1Q9Y5B6 917 aa26.34■■□□□ 1.81
SHARPIN-201ENST00000359551 SETSIPP0DME0 302 aa26.34■■□□□ 1.81
SHARPIN-201ENST00000359551 LAG3P18627 525 aa26.34■■□□□ 1.81
SHARPIN-201ENST00000359551 RASIP1Q5U651 963 aa26.34■■□□□ 1.81
SHARPIN-201ENST00000359551 FAM171A1Q5VUB5 890 aa26.34■■□□□ 1.81
SHARPIN-201ENST00000359551 PDZRN4Q6ZMN7 1036 aaPredicted RBP26.34■■□□□ 1.81
SHARPIN-201ENST00000359551 RHOT2Q8IXI1 618 aa26.34■■□□□ 1.81
SHARPIN-201ENST00000359551 RNF168Q8IYW5 571 aaPredicted RBP26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms