RNA–Protein interactions for RNA: ENST00000359461.10

YIF1A-201, Transcript of Yip1 interacting factor homolog A, membrane trafficking protein, humanhuman

TSL 2 BASIC

Gene YIF1A, Length 943 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIF1A-201ENST00000359461 TAF12Q16514 161 aa24.83■■□□□ 1.57
YIF1A-201ENST00000359461 FSTL4Q6MZW2 842 aa24.83■■□□□ 1.57
YIF1A-201ENST00000359461 TMLHEQ9NVH6 421 aa24.83■■□□□ 1.57
YIF1A-201ENST00000359461 SMC3Q9UQE7 1217 aa24.83■■□□□ 1.57
YIF1A-201ENST00000359461 PCDHB5Q9Y5E4 795 aa24.83■■□□□ 1.57
YIF1A-201ENST00000359461 USP24Q9UPU5 2620 aa24.83■■□□□ 1.57
YIF1A-201ENST00000359461 PTPRDP23468 1912 aa24.82■■□□□ 1.56
YIF1A-201ENST00000359461 OTOL1A6NHN0 477 aaPredicted RBP24.82■■□□□ 1.56
YIF1A-201ENST00000359461 TRDMT1O14717 391 aaKnown RBP24.82■■□□□ 1.56
YIF1A-201ENST00000359461 AVPR1AP37288 418 aa24.82■■□□□ 1.56
YIF1A-201ENST00000359461 PNPLA4P41247 253 aa24.82■■□□□ 1.56
YIF1A-201ENST00000359461 WNT7BP56706 349 aa24.82■■□□□ 1.56
YIF1A-201ENST00000359461 RUNX3Q13761 415 aa24.82■■□□□ 1.56
YIF1A-201ENST00000359461 CEP68Q76N32 757 aa24.82■■□□□ 1.56
YIF1A-201ENST00000359461 MAB21L3Q8N8X9 362 aa24.82■■□□□ 1.56
YIF1A-201ENST00000359461 KRI1Q8N9T8 703 aaKnown RBP24.82■■□□□ 1.56
YIF1A-201ENST00000359461 RIN3Q8TB24 985 aa24.82■■□□□ 1.56
YIF1A-201ENST00000359461 POMGNT1Q8WZA1 660 aa24.82■■□□□ 1.56
YIF1A-201ENST00000359461 GDF9O60383 454 aa24.81■■□□□ 1.56
YIF1A-201ENST00000359461 ZNF268Q14587 947 aaPredicted RBP24.81■■□□□ 1.56
YIF1A-201ENST00000359461 POSTNQ15063 836 aa24.81■■□□□ 1.56
YIF1A-201ENST00000359461 PPM1JQ5JR12 505 aa24.81■■□□□ 1.56
YIF1A-201ENST00000359461 LARP1BQ659C4 914 aaKnown RBP24.81■■□□□ 1.56
YIF1A-201ENST00000359461 GAB3Q8WWW8 586 aa24.81■■□□□ 1.56
YIF1A-201ENST00000359461 LOXL4Q96JB6 756 aa24.81■■□□□ 1.56
YIF1A-201ENST00000359461 TDP1Q9NUW8 608 aa24.81■■□□□ 1.56
YIF1A-201ENST00000359461 SEL1LQ9UBV2 794 aa24.81■■□□□ 1.56
YIF1A-201ENST00000359461 STK17AQ9UEE5 414 aa24.81■■□□□ 1.56
YIF1A-201ENST00000359461 TADA3O75528 432 aa24.8■■□□□ 1.56
YIF1A-201ENST00000359461 CSH1P0DML2 217 aa24.8■■□□□ 1.56
YIF1A-201ENST00000359461 CSH2P0DML3 217 aa24.8■■□□□ 1.56
YIF1A-201ENST00000359461 TSPY1Q01534 308 aa24.8■■□□□ 1.56
YIF1A-201ENST00000359461 NFE2Q16621 373 aaPredicted RBP24.8■■□□□ 1.56
YIF1A-201ENST00000359461 TRIM68Q6AZZ1 485 aa24.8■■□□□ 1.56
YIF1A-201ENST00000359461 USP49Q70CQ1 688 aa24.8■■□□□ 1.56
YIF1A-201ENST00000359461 MON1AQ86VX9 555 aa24.8■■□□□ 1.56
YIF1A-201ENST00000359461 BRSK2Q8IWQ3 736 aa24.8■■□□□ 1.56
YIF1A-201ENST00000359461 PDCL2Q8N4E4 241 aa24.8■■□□□ 1.56
YIF1A-201ENST00000359461 CXorf38Q8TB03 319 aa24.8■■□□□ 1.56
YIF1A-201ENST00000359461 EPSTI1Q96J88 318 aa24.8■■□□□ 1.56
YIF1A-201ENST00000359461 PKMYT1Q99640 499 aa24.8■■□□□ 1.56
YIF1A-201ENST00000359461 EBF3Q9H4W6 596 aa24.8■■□□□ 1.56
YIF1A-201ENST00000359461 ABCB6Q9NP58 842 aa24.8■■□□□ 1.56
YIF1A-201ENST00000359461 RAP1GAPP47736 663 aa24.79■■□□□ 1.56
YIF1A-201ENST00000359461 GPR15P49685 360 aa24.79■■□□□ 1.56
YIF1A-201ENST00000359461 LIMK1P53667 647 aa24.79■■□□□ 1.56
YIF1A-201ENST00000359461 KCNA1Q09470 495 aa24.79■■□□□ 1.56
YIF1A-201ENST00000359461 GRSF1Q12849 480 aaKnown RBP eCLIP24.79■■□□□ 1.56
YIF1A-201ENST00000359461 BFSP1Q12934 665 aa24.79■■□□□ 1.56
YIF1A-201ENST00000359461 TXNDC8Q6A555 127 aa24.79■■□□□ 1.56
YIF1A-201ENST00000359461 DYMQ7RTS9 669 aa24.79■■□□□ 1.56
YIF1A-201ENST00000359461 C1orf127Q8N9H9 656 aa24.79■■□□□ 1.56
YIF1A-201ENST00000359461 STKLD1Q8NE28 680 aa24.79■■□□□ 1.56
YIF1A-201ENST00000359461 TRMT2BQ96GJ1 504 aaKnown RBP24.79■■□□□ 1.56
YIF1A-201ENST00000359461 ACBD6Q9BR61 282 aa24.79■■□□□ 1.56
YIF1A-201ENST00000359461 L1RE1Q9UN81 338 aa24.79■■□□□ 1.56
YIF1A-201ENST00000359461 ZSCAN21Q9Y5A6 473 aaPredicted RBP24.79■■□□□ 1.56
YIF1A-201ENST00000359461 LAMA1P25391 3075 aa24.78■■□□□ 1.56
YIF1A-201ENST00000359461 ATG13O75143 517 aa24.78■■□□□ 1.56
YIF1A-201ENST00000359461 AKAP3O75969 853 aa24.78■■□□□ 1.56
YIF1A-201ENST00000359461 NOL4O94818 638 aa24.78■■□□□ 1.56
YIF1A-201ENST00000359461 EPN2O95208 641 aa24.78■■□□□ 1.56
YIF1A-201ENST00000359461 ARSAP15289 507 aa24.78■■□□□ 1.56
YIF1A-201ENST00000359461 POLR2BP30876 1174 aaKnown RBP24.78■■□□□ 1.56
YIF1A-201ENST00000359461 L1TD1Q5T7N2 865 aaKnown RBP24.78■■□□□ 1.56
YIF1A-201ENST00000359461 LRRC52Q8N7C0 313 aa24.78■■□□□ 1.56
YIF1A-201ENST00000359461 ZSWIM2Q8NEG5 633 aa24.78■■□□□ 1.56
YIF1A-201ENST00000359461 MRPS31Q92665 395 aaKnown RBP24.78■■□□□ 1.56
YIF1A-201ENST00000359461 DNAJC19Q96DA6 116 aa24.78■■□□□ 1.56
YIF1A-201ENST00000359461 MYRFLQ96LU7 910 aa24.78■■□□□ 1.56
YIF1A-201ENST00000359461 PI4K2AQ9BTU6 479 aa24.78■■□□□ 1.56
YIF1A-201ENST00000359461 PRPF40AO75400 957 aaKnown RBP24.77■■□□□ 1.56
YIF1A-201ENST00000359461 RPP40O75818 363 aaKnown RBP24.77■■□□□ 1.56
YIF1A-201ENST00000359461 ITGB3P05106 788 aa24.77■■□□□ 1.56
YIF1A-201ENST00000359461 GAP43P17677 238 aa24.77■■□□□ 1.56
YIF1A-201ENST00000359461 PDGFRLQ15198 375 aa24.77■■□□□ 1.56
YIF1A-201ENST00000359461 INTS6LQ5JSJ4 861 aaKnown RBP24.77■■□□□ 1.56
YIF1A-201ENST00000359461 TMEM86AQ8N2M4 240 aa24.77■■□□□ 1.56
YIF1A-201ENST00000359461 SPATA18Q8TC71 538 aa24.77■■□□□ 1.56
YIF1A-201ENST00000359461 FAM213AQ9BRX8 229 aa24.77■■□□□ 1.56
YIF1A-201ENST00000359461 MRPL44Q9H9J2 332 aaKnown RBP24.77■■□□□ 1.56
YIF1A-201ENST00000359461 OLFML3Q9NRN5 406 aa24.77■■□□□ 1.56
YIF1A-201ENST00000359461 GDAP2Q9NXN4 497 aa24.77■■□□□ 1.56
YIF1A-201ENST00000359461 UXTQ9UBK9 157 aaPredicted RBP24.77■■□□□ 1.56
YIF1A-201ENST00000359461 EXOC7Q9UPT5 735 aa24.77■■□□□ 1.56
YIF1A-201ENST00000359461 MYMKA6NI61 221 aa24.76■■□□□ 1.55
YIF1A-201ENST00000359461 EGFP01133 1207 aa24.76■■□□□ 1.55
YIF1A-201ENST00000359461 ZNF806P0C7X5 589 aa24.76■■□□□ 1.55
YIF1A-201ENST00000359461 PXNP49023 591 aaPredicted RBP24.76■■□□□ 1.55
YIF1A-201ENST00000359461 TFAMQ00059 246 aaKnown RBP24.76■■□□□ 1.55
YIF1A-201ENST00000359461 AMPD2Q01433 879 aa24.76■■□□□ 1.55
YIF1A-201ENST00000359461 USP4Q13107 963 aa24.76■■□□□ 1.55
YIF1A-201ENST00000359461 SDHAF4Q5VUM1 108 aa24.76■■□□□ 1.55
YIF1A-201ENST00000359461 CACNA2D4Q7Z3S7 1137 aa24.76■■□□□ 1.55
YIF1A-201ENST00000359461 KBTBD6Q86V97 674 aa24.76■■□□□ 1.55
YIF1A-201ENST00000359461 CAMKK1Q8N5S9 505 aa24.76■■□□□ 1.55
YIF1A-201ENST00000359461 DDX1Q92499 740 aaKnown RBP24.76■■□□□ 1.55
YIF1A-201ENST00000359461 ACCSQ96QU6 501 aa24.76■■□□□ 1.55
YIF1A-201ENST00000359461 FBRSL1Q9HCM7 1045 aaKnown RBP24.76■■□□□ 1.55
YIF1A-201ENST00000359461 DDX43Q9NXZ2 648 aaKnown RBP24.76■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms