RNA–Protein interactions for RNA: ENST00000359253.2

CCDC197-201, Transcript of coiled-coil domain containing 197, humanhuman

TSL 1 (best)

Gene CCDC197, Length 1,275 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197-201ENST00000359253 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.3□□□□□ -0.12
CCDC197-201ENST00000359253 FEZF2Q8TBJ5 459 aa14.3□□□□□ -0.12
CCDC197-201ENST00000359253 STK32AQ8WU08 396 aa14.3□□□□□ -0.12
CCDC197-201ENST00000359253 TFAP2BQ92481 460 aa14.3□□□□□ -0.12
CCDC197-201ENST00000359253 ANKRD7Q92527 254 aa14.3□□□□□ -0.12
CCDC197-201ENST00000359253 PPP1R12CQ9BZL4 782 aa14.3□□□□□ -0.12
CCDC197-201ENST00000359253 SNX25Q9H3E2 840 aa14.3□□□□□ -0.12
CCDC197-201ENST00000359253 IL23AQ9NPF7 189 aa14.3□□□□□ -0.12
CCDC197-201ENST00000359253 CYLDQ9NQC7 956 aa14.3□□□□□ -0.12
CCDC197-201ENST00000359253 ARGLU1Q9NWB6 273 aaPredicted RBP14.3□□□□□ -0.12
CCDC197-201ENST00000359253 O00370 1275 aa14.29□□□□□ -0.12
CCDC197-201ENST00000359253 NCK2O43639 380 aa14.29□□□□□ -0.12
CCDC197-201ENST00000359253 CXCL10P02778 98 aa14.29□□□□□ -0.12
CCDC197-201ENST00000359253 GNL1P36915 607 aaPredicted RBP14.29□□□□□ -0.12
CCDC197-201ENST00000359253 GABRB2P47870 512 aa14.29□□□□□ -0.12
CCDC197-201ENST00000359253 LHX1P48742 406 aa14.29□□□□□ -0.12
CCDC197-201ENST00000359253 MAMLD1Q13495 774 aa14.29□□□□□ -0.12
CCDC197-201ENST00000359253 MESDQ14696 234 aa14.29□□□□□ -0.12
CCDC197-201ENST00000359253 SOWAHAQ2M3V2 549 aa14.29□□□□□ -0.12
CCDC197-201ENST00000359253 MTERF4Q7Z6M4 381 aaKnown RBP14.29□□□□□ -0.12
CCDC197-201ENST00000359253 ZNF598Q86UK7 904 aaKnown RBP14.29□□□□□ -0.12
CCDC197-201ENST00000359253 ECHDC2Q86YB7 292 aa14.29□□□□□ -0.12
CCDC197-201ENST00000359253 C3orf20Q8ND61 904 aa14.29□□□□□ -0.12
CCDC197-201ENST00000359253 GSTCDQ8NEC7 633 aa14.29□□□□□ -0.12
CCDC197-201ENST00000359253 OR6B3Q8NGW1 331 aa14.29□□□□□ -0.12
CCDC197-201ENST00000359253 COG1Q8WTW3 980 aa14.29□□□□□ -0.12
CCDC197-201ENST00000359253 C18orf8Q96DM3 657 aa14.29□□□□□ -0.12
CCDC197-201ENST00000359253 GAD1Q99259 594 aa14.29□□□□□ -0.12
CCDC197-201ENST00000359253 ZSWIM1Q9BR11 485 aa14.29□□□□□ -0.12
CCDC197-201ENST00000359253 C11orf70Q9BRQ4 267 aa14.29□□□□□ -0.12
CCDC197-201ENST00000359253 UBE2OQ9C0C9 1292 aaKnown RBP14.29□□□□□ -0.12
CCDC197-201ENST00000359253 ELAC1Q9H777 363 aaKnown RBP14.29□□□□□ -0.12
CCDC197-201ENST00000359253 KANSL3Q9P2N6 904 aa14.29□□□□□ -0.12
CCDC197-201ENST00000359253 HESX1Q9UBX0 185 aa14.29□□□□□ -0.12
CCDC197-201ENST00000359253 IP6K2Q9UHH9 426 aa14.29□□□□□ -0.12
CCDC197-201ENST00000359253 ANAPC7Q9UJX3 599 aa14.29□□□□□ -0.12
CCDC197-201ENST00000359253 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.29□□□□□ -0.12
CCDC197-201ENST00000359253 TARSL2A2RTX5 802 aaKnown RBP14.28□□□□□ -0.12
CCDC197-201ENST00000359253 A8MXQ7 604 aa14.28□□□□□ -0.12
CCDC197-201ENST00000359253 CCDC188H7C350 402 aa14.28□□□□□ -0.12
CCDC197-201ENST00000359253 PGRMC1O00264 195 aaKnown RBP14.28□□□□□ -0.12
CCDC197-201ENST00000359253 ZNF185O15231 689 aa14.28□□□□□ -0.12
CCDC197-201ENST00000359253 SPOPO43791 374 aa14.28□□□□□ -0.12
CCDC197-201ENST00000359253 MICAL2O94851 1124 aa14.28□□□□□ -0.12
CCDC197-201ENST00000359253 FGBP02675 491 aa14.28□□□□□ -0.12
CCDC197-201ENST00000359253 CSF2RAP15509 400 aa14.28□□□□□ -0.12
CCDC197-201ENST00000359253 MLH1P40692 756 aa14.28□□□□□ -0.12
CCDC197-201ENST00000359253 GPD2P43304 727 aa14.28□□□□□ -0.12
CCDC197-201ENST00000359253 CCL23P55773 120 aa14.28□□□□□ -0.12
CCDC197-201ENST00000359253 SOX4Q06945 474 aaPredicted RBP14.28□□□□□ -0.12
CCDC197-201ENST00000359253 TEX35Q5T0J7 233 aa14.28□□□□□ -0.12
CCDC197-201ENST00000359253 DNAJC24Q6P3W2 148 aa14.28□□□□□ -0.12
CCDC197-201ENST00000359253 PSRC1Q6PGN9 363 aaPredicted RBP14.28□□□□□ -0.12
CCDC197-201ENST00000359253 MMS22LQ6ZRQ5 1243 aa14.28□□□□□ -0.12
CCDC197-201ENST00000359253 ZDHHC17Q8IUH5 632 aa14.28□□□□□ -0.12
CCDC197-201ENST00000359253 PASD1Q8IV76 773 aa14.28□□□□□ -0.12
CCDC197-201ENST00000359253 WDTC1Q8N5D0 677 aa14.28□□□□□ -0.12
CCDC197-201ENST00000359253 C1orf131Q8NDD1 294 aaKnown RBP14.28□□□□□ -0.12
CCDC197-201ENST00000359253 SPATA4Q8NEY3 305 aa14.28□□□□□ -0.12
CCDC197-201ENST00000359253 IPO4Q8TEX9 1081 aaKnown RBP14.28□□□□□ -0.12
CCDC197-201ENST00000359253 CAPZA3Q96KX2 299 aa14.28□□□□□ -0.12
CCDC197-201ENST00000359253 TWNKQ96RR1 684 aa14.28□□□□□ -0.12
CCDC197-201ENST00000359253 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.28□□□□□ -0.12
CCDC197-201ENST00000359253 CXCL16Q9H2A7 254 aa14.28□□□□□ -0.12
CCDC197-201ENST00000359253 PCDHA3Q9Y5H8 950 aa14.28□□□□□ -0.12
CCDC197-201ENST00000359253 TMEM191CA6NGB0 347 aa14.27□□□□□ -0.13
CCDC197-201ENST00000359253 SIGLEC16A6NMB1 481 aa14.27□□□□□ -0.13
CCDC197-201ENST00000359253 C9IYK1 514 aa14.27□□□□□ -0.13
CCDC197-201ENST00000359253 PODXLO00592 558 aa14.27□□□□□ -0.13
CCDC197-201ENST00000359253 CYB561D2O14569 222 aa14.27□□□□□ -0.13
CCDC197-201ENST00000359253 PPEF2O14830 753 aa14.27□□□□□ -0.13
CCDC197-201ENST00000359253 DDX3YO15523 660 aaKnown RBP14.27□□□□□ -0.13
CCDC197-201ENST00000359253 MGEA5O60502 916 aa14.27□□□□□ -0.13
CCDC197-201ENST00000359253 EFCAB14O75071 495 aa14.27□□□□□ -0.13
CCDC197-201ENST00000359253 PROSCO94903 275 aa14.27□□□□□ -0.13
CCDC197-201ENST00000359253 CALCAP01258 141 aa14.27□□□□□ -0.13
CCDC197-201ENST00000359253 CFHP08603 1231 aa14.27□□□□□ -0.13
CCDC197-201ENST00000359253 COMTP21964 271 aa14.27□□□□□ -0.13
CCDC197-201ENST00000359253 CXCR5P32302 372 aa14.27□□□□□ -0.13
CCDC197-201ENST00000359253 CTNNA1P35221 906 aaKnown RBP14.27□□□□□ -0.13
CCDC197-201ENST00000359253 TUSC3Q13454 348 aa14.27□□□□□ -0.13
CCDC197-201ENST00000359253 PIGHQ14442 188 aaPredicted RBP14.27□□□□□ -0.13
CCDC197-201ENST00000359253 ACAP1Q15027 740 aa14.27□□□□□ -0.13
CCDC197-201ENST00000359253 ELF2Q15723 593 aa14.27□□□□□ -0.13
CCDC197-201ENST00000359253 DENND1BQ6P3S1 775 aa14.27□□□□□ -0.13
CCDC197-201ENST00000359253 GLB1LQ6UWU2 654 aa14.27□□□□□ -0.13
CCDC197-201ENST00000359253 C16orf59Q7L2K0 433 aa14.27□□□□□ -0.13
CCDC197-201ENST00000359253 ADGRF2Q8IZF7 708 aa14.27□□□□□ -0.13
CCDC197-201ENST00000359253 FNIP1Q8TF40 1166 aa14.27□□□□□ -0.13
CCDC197-201ENST00000359253 CD101Q93033 1021 aa14.27□□□□□ -0.13
CCDC197-201ENST00000359253 ZFP42Q96MM3 310 aa14.27□□□□□ -0.13
CCDC197-201ENST00000359253 NCAPGQ9BPX3 1015 aa14.27□□□□□ -0.13
CCDC197-201ENST00000359253 MRPL45Q9BRJ2 306 aaKnown RBP14.27□□□□□ -0.13
CCDC197-201ENST00000359253 MTIF3Q9H2K0 278 aaKnown RBP14.27□□□□□ -0.13
CCDC197-201ENST00000359253 DSEQ9UL01 958 aa14.27□□□□□ -0.13
CCDC197-201ENST00000359253 TRIP11Q15643 1979 aa14.27□□□□□ -0.13
CCDC197-201ENST00000359253 TCRBV5S1A1TA0A578 114 aa14.26□□□□□ -0.13
CCDC197-201ENST00000359253 M0QYV0 167 aa14.26□□□□□ -0.13
CCDC197-201ENST00000359253 GABRDO14764 452 aa14.26□□□□□ -0.13
CCDC197-201ENST00000359253 SPTLC1O15269 473 aa14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms