RNA–Protein interactions for RNA: ENST00000358392.6

COL11A1-202, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,327 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-202ENST00000358392 COMMD2Q86X83 199 aa11.63□□□□□ -0.55
COL11A1-202ENST00000358392 OLFM1Q99784 485 aa11.63□□□□□ -0.55
COL11A1-202ENST00000358392 NMRK2Q9NPI5 230 aa11.63□□□□□ -0.55
COL11A1-202ENST00000358392 RIC8BQ9NVN3 520 aa11.63□□□□□ -0.55
COL11A1-202ENST00000358392 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.63□□□□□ -0.55
COL11A1-202ENST00000358392 TEX14Q8IWB6 1497 aa11.63□□□□□ -0.55
COL11A1-202ENST00000358392 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.63□□□□□ -0.55
COL11A1-202ENST00000358392 SNPHO15079 494 aa11.63□□□□□ -0.55
COL11A1-202ENST00000358392 RRM2P31350 389 aa11.63□□□□□ -0.55
COL11A1-202ENST00000358392 RDM1Q8NG50 284 aa11.63□□□□□ -0.55
COL11A1-202ENST00000358392 EPS8L3Q8TE67 593 aaKnown RBP11.63□□□□□ -0.55
COL11A1-202ENST00000358392 ZNF669Q96BR6 464 aaPredicted RBP11.63□□□□□ -0.55
COL11A1-202ENST00000358392 ZNF512Q96ME7 567 aaPredicted RBP11.63□□□□□ -0.55
COL11A1-202ENST00000358392 MAN1C1Q9NR34 630 aa11.63□□□□□ -0.55
COL11A1-202ENST00000358392 FBXO40Q9UH90 709 aa11.63□□□□□ -0.55
COL11A1-202ENST00000358392 CDY2AQ9Y6F7 541 aa11.63□□□□□ -0.55
COL11A1-202ENST00000358392 CDY1Q9Y6F8 540 aa11.63□□□□□ -0.55
COL11A1-202ENST00000358392 ECE2O60344 883 aa11.63□□□□□ -0.55
COL11A1-202ENST00000358392 CYP19A1P11511 503 aaPredicted RBP11.63□□□□□ -0.55
COL11A1-202ENST00000358392 COMTP21964 271 aa11.63□□□□□ -0.55
COL11A1-202ENST00000358392 RGS4P49798 205 aa11.63□□□□□ -0.55
COL11A1-202ENST00000358392 NCOA4Q13772 614 aa11.63□□□□□ -0.55
COL11A1-202ENST00000358392 TMEM132DQ14C87 1099 aa11.63□□□□□ -0.55
COL11A1-202ENST00000358392 QRICH1Q2TAL8 776 aa11.63□□□□□ -0.55
COL11A1-202ENST00000358392 CCNI2Q6ZMN8 369 aaPredicted RBP11.63□□□□□ -0.55
COL11A1-202ENST00000358392 JAMLQ86YT9 394 aa11.63□□□□□ -0.55
COL11A1-202ENST00000358392 SPIRE2Q8WWL2 714 aa11.63□□□□□ -0.55
COL11A1-202ENST00000358392 VTA1Q9NP79 307 aa11.63□□□□□ -0.55
COL11A1-202ENST00000358392 GRID1Q9ULK0 1009 aa11.63□□□□□ -0.55
COL11A1-202ENST00000358392 PHTF1Q9UMS5 762 aa11.63□□□□□ -0.55
COL11A1-202ENST00000358392 HEATR9A2RTY3 570 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 EIF2S1P05198 315 aaKnown RBP11.62□□□□□ -0.55
COL11A1-202ENST00000358392 MRPS35P82673 323 aaKnown RBP11.62□□□□□ -0.55
COL11A1-202ENST00000358392 HLFQ16534 295 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 AGBL2Q5U5Z8 902 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 CNPY4Q8N129 248 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 HIC2Q96JB3 615 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 C2CD2LO14523 706 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 PMPCBO75439 489 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 SPP2Q13103 211 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 ORC1Q13415 861 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 NCF4Q15080 339 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 MIEF2Q96C03 454 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 KLHL1Q9NR64 748 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 SNX8Q9Y5X2 465 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 NFICP08651 508 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 GPC1P35052 558 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 ZNF57Q68EA5 555 aaPredicted RBP11.62□□□□□ -0.55
COL11A1-202ENST00000358392 TRIM48Q8IWZ4 208 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 SIRT2Q8IXJ6 389 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 LRRC34Q8IZ02 419 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 C2orf69Q8N8R5 385 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 RBBP8NLQ8NC74 664 aaPredicted RBP11.62□□□□□ -0.55
COL11A1-202ENST00000358392 USP13Q92995 863 aaPredicted RBP11.62□□□□□ -0.55
COL11A1-202ENST00000358392 NACC2Q96BF6 587 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 L3MBTL3Q96JM7 780 aaPredicted RBP11.62□□□□□ -0.55
COL11A1-202ENST00000358392 NOL6Q9H6R4 1146 aaKnown RBP11.62□□□□□ -0.55
COL11A1-202ENST00000358392 SH3BP1Q9Y3L3 701 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 GCC2Q8IWJ2 1684 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 PIGHQ14442 188 aaPredicted RBP11.62□□□□□ -0.55
COL11A1-202ENST00000358392 GRM4Q14833 912 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 SLC18A3Q16572 532 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 C19orf60Q96EN9 201 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 BSDC1Q9NW68 430 aaPredicted RBP11.62□□□□□ -0.55
COL11A1-202ENST00000358392 GEMIN4P57678 1058 aaKnown RBP11.62□□□□□ -0.55
COL11A1-202ENST00000358392 CNTN1Q12860 1018 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 ZC2HC1CQ53FD0 456 aaPredicted RBP11.62□□□□□ -0.55
COL11A1-202ENST00000358392 TRIM65Q6PJ69 517 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 RTL3Q8N8U3 475 aaKnown RBP11.62□□□□□ -0.55
COL11A1-202ENST00000358392 BLOC1S5Q8TDH9 187 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 MPP4Q96JB8 637 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 SERHL2Q9H4I8 314 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 SERHLQ9NQF3 203 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 MCM8Q9UJA3 840 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 LSM7Q9UK45 103 aaKnown RBP11.62□□□□□ -0.55
COL11A1-202ENST00000358392 FHOD1Q9Y613 1164 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 VWA5AO00534 786 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 SUPT7LO94864 414 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 COA1Q9GZY4 146 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 KRCC1Q9NPI7 259 aaPredicted RBP11.62□□□□□ -0.55
COL11A1-202ENST00000358392 PTPRTO14522 1441 aa11.62□□□□□ -0.55
COL11A1-202ENST00000358392 STK36Q9NRP7 1315 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 ABCB1P08183 1280 aaPredicted RBP11.61□□□□□ -0.55
COL11A1-202ENST00000358392 LAMB3Q13751 1172 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 UGP2Q16851 508 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 CYB5D1Q6P9G0 228 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 MEI4A8MW99 385 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 ZNF862O60290 1169 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 ATP6V1C1P21283 382 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 B3GALNT2Q8NCR0 500 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 WDR36Q8NI36 951 aaKnown RBP11.61□□□□□ -0.55
COL11A1-202ENST00000358392 TRPC4APQ8TEL6 797 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 TSEN34Q9BSV6 310 aaKnown RBP11.61□□□□□ -0.55
COL11A1-202ENST00000358392 CYLDQ9NQC7 956 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 RPS6KB2Q9UBS0 482 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 C1orf232A0A0U1RR37 186 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 P4HA2O15460 535 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 CYP7B1O75881 506 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 ENDOD1O94919 500 aa11.61□□□□□ -0.55
COL11A1-202ENST00000358392 NCAM1P13591 858 aa11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms