RNA–Protein interactions for RNA: ENST00000358273.8

NF1-202, Transcript of neurofibromin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene NF1, Length 12,425 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-202ENST00000358273 NEDD4P46934 1319 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 INO80B-WBP1J3KQ70 363 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 SYNCRIPO60506 623 aaKnown RBP7.25□□□□□ -1.25
NF1-202ENST00000358273 DMC1Q14565 340 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 RABL6Q3YEC7 729 aaPredicted RBP7.25□□□□□ -1.25
NF1-202ENST00000358273 SETD3Q86TU7 594 aaPredicted RBP7.25□□□□□ -1.25
NF1-202ENST00000358273 NLRP4Q96MN2 994 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 KCNK16Q96T55 309 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 TPK1Q9H3S4 243 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 MOV10Q9HCE1 1003 aaKnown RBP7.25□□□□□ -1.25
NF1-202ENST00000358273 HEY1Q9Y5J3 304 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 TMCC2O75069 709 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 ITGA8P53708 1063 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 LDLRAP1Q5SW96 308 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 RHOT2Q8IXI1 618 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 NCLNQ969V3 563 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 RMDN1Q96DB5 314 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 TRIM64A6NGJ6 449 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 TRIM64BA6NI03 449 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 TLR2O60603 784 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 USP11P51784 963 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 CCNG1P51959 295 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 PSMC6P62333 389 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 MTHFSDQ2M296 383 aaKnown RBP7.25□□□□□ -1.25
NF1-202ENST00000358273 IZUMO3Q5VZ72 239 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 ITPRIPL1Q6GPH6 555 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 EXOC3L1Q86VI1 746 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 ZSCAN18Q8TBC5 510 aaPredicted RBP7.25□□□□□ -1.25
NF1-202ENST00000358273 XAGE3Q8WTP9 111 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 PAWRQ96IZ0 340 aaKnown RBP7.25□□□□□ -1.25
NF1-202ENST00000358273 KLC2Q9H0B6 622 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 SEMA4AQ9H3S1 761 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 CCDC162PA2VCL2 907 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 MAP3K13O43283 966 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 TNFRSF21O75509 655 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 BFSP1Q12934 665 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 KLHL38Q2WGJ6 581 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 NEK8Q86SG6 692 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 MIGA1Q8NAN2 632 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 KLF6Q99612 283 aaPredicted RBP7.25□□□□□ -1.25
NF1-202ENST00000358273 ENTPD7Q9NQZ7 604 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 UVRAGQ9P2Y5 699 aa7.25□□□□□ -1.25
NF1-202ENST00000358273 XIAPP98170 497 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 CDK16Q00536 496 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 RRP1BQ14684 758 aaKnown RBP7.24□□□□□ -1.25
NF1-202ENST00000358273 SLC18A3Q16572 532 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 KRT25Q7Z3Z0 450 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 ECHDC2Q86YB7 292 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 ZCCHC7Q8N3Z6 543 aaKnown RBP7.24□□□□□ -1.25
NF1-202ENST00000358273 TBC1D16Q8TBP0 767 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 RFFLQ8WZ73 363 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 HTRA1Q92743 480 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 STARD13Q9Y3M8 1113 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 FAM32AQ9Y421 112 aaKnown RBP7.24□□□□□ -1.25
NF1-202ENST00000358273 GH1P01241 217 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 TPTEP56180 551 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 MORF4L2Q15014 288 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 EFTUD2Q15029 972 aaKnown RBP eCLIP7.24□□□□□ -1.257e-9■■■■■ 40.6
NF1-202ENST00000358273 BRD7Q9NPI1 651 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 BRWD1Q9NSI6 2320 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 SAC3D1A6NKF1 404 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 MTRF1O75570 445 aaKnown RBP7.24□□□□□ -1.25
NF1-202ENST00000358273 C6orf52Q5T4I8 152 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 ENDOVQ8N8Q3 282 aaKnown RBP7.24□□□□□ -1.25
NF1-202ENST00000358273 PBXIP1Q96AQ6 731 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 CHMP1AQ9HD42 196 aaPredicted RBP7.24□□□□□ -1.25
NF1-202ENST00000358273 A0A087WXM4 84 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 SARSP49591 514 aaKnown RBP7.24□□□□□ -1.25
NF1-202ENST00000358273 INPP5AQ14642 412 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 CCDC28AQ8IWP9 274 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 UNC45BQ8IWX7 931 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 TMA16Q96EY4 203 aaKnown RBP7.24□□□□□ -1.25
NF1-202ENST00000358273 CDC42EP4Q9H3Q1 356 aaKnown RBP7.24□□□□□ -1.25
NF1-202ENST00000358273 C21orf62-AS1Q17RA5 79 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 MCUQ8NE86 351 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 PUS3Q9BZE2 481 aaKnown RBP7.24□□□□□ -1.25
NF1-202ENST00000358273 C6orf50Q9HD87 102 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 FARSBQ9NSD9 589 aaKnown RBP7.24□□□□□ -1.25
NF1-202ENST00000358273 FLT4P35916 1363 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 STK36Q9NRP7 1315 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 AIM2O14862 343 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 PHGDHO43175 533 aaKnown RBP7.24□□□□□ -1.25
NF1-202ENST00000358273 SNX16P57768 344 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 RBM20Q5T481 1227 aaKnown RBP7.24□□□□□ -1.25
NF1-202ENST00000358273 TPCN2Q8NHX9 752 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 COL3A1P02461 1466 aaPredicted RBP7.24□□□□□ -1.25
NF1-202ENST00000358273 ATMINO43313 823 aaPredicted RBP7.24□□□□□ -1.25
NF1-202ENST00000358273 FGAP02671 866 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 FCER1AP12319 257 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 ALOX12P18054 663 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 ABATP80404 500 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 MYL7Q01449 175 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 CDC16Q13042 620 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 ZNF846Q147U1 533 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 MEI1Q5TIA1 1274 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 GIMAP8Q8ND71 665 aaPredicted RBP7.24□□□□□ -1.25
NF1-202ENST00000358273 ACMSDQ8TDX5 336 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 STARD8Q92502 1023 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 RIBC2Q9H4K1 309 aa7.24□□□□□ -1.25
NF1-202ENST00000358273 SLC35C2Q9NQQ7 365 aa7.24□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms