RNA–Protein interactions for RNA: ENST00000358028.8

NIPAL3-203, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 1,757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-203ENST00000358028 RNF25Q96BH1 459 aaPredicted RBP15.13■□□□□ 0.01
NIPAL3-203ENST00000358028 MTMR12Q9C0I1 747 aa15.13■□□□□ 0.01
NIPAL3-203ENST00000358028 HOMER3Q9NSC5 361 aa15.13■□□□□ 0.01
NIPAL3-203ENST00000358028 LAMA3Q16787 3333 aa15.12■□□□□ 0.01
NIPAL3-203ENST00000358028 PSTPIP1O43586 416 aa15.12■□□□□ 0.01
NIPAL3-203ENST00000358028 CAND2O75155 1236 aa15.12■□□□□ 0.01
NIPAL3-203ENST00000358028 KCNJ1P48048 391 aa15.12■□□□□ 0.01
NIPAL3-203ENST00000358028 MYL6P60660 151 aa15.12■□□□□ 0.01
NIPAL3-203ENST00000358028 CAV1Q03135 178 aa15.12■□□□□ 0.01
NIPAL3-203ENST00000358028 CALCOCO2Q13137 446 aa15.12■□□□□ 0.01
NIPAL3-203ENST00000358028 MAMLD1Q13495 774 aa15.12■□□□□ 0.01
NIPAL3-203ENST00000358028 TFDP1Q14186 410 aa15.12■□□□□ 0.01
NIPAL3-203ENST00000358028 PACS2Q86VP3 889 aa15.12■□□□□ 0.01
NIPAL3-203ENST00000358028 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.12■□□□□ 0.01
NIPAL3-203ENST00000358028 GRK7Q8WTQ7 553 aa15.12■□□□□ 0.01
NIPAL3-203ENST00000358028 RAPGEF5Q92565 580 aa15.12■□□□□ 0.01
NIPAL3-203ENST00000358028 P3H4Q92791 437 aa15.12■□□□□ 0.01
NIPAL3-203ENST00000358028 FAM212AQ96EL1 285 aa15.12■□□□□ 0.01
NIPAL3-203ENST00000358028 ROPN1BQ9BZX4 212 aaPredicted RBP15.12■□□□□ 0.01
NIPAL3-203ENST00000358028 NIF3L1Q9GZT8 377 aa15.12■□□□□ 0.01
NIPAL3-203ENST00000358028 PRO3102Q9H379 93 aa15.12■□□□□ 0.01
NIPAL3-203ENST00000358028 SMARCAD1Q9H4L7 1026 aa15.12■□□□□ 0.01
NIPAL3-203ENST00000358028 ROPN1Q9HAT0 212 aaPredicted RBP15.12■□□□□ 0.01
NIPAL3-203ENST00000358028 NR2E3Q9Y5X4 410 aa15.12■□□□□ 0.01
NIPAL3-203ENST00000358028 RGS16O15492 202 aaPredicted RBP15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 MYL3P08590 195 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 ITIH2P19823 946 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 PROZP22891 400 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 MMP13P45452 471 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 LIG3P49916 1009 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 SLC26A2P50443 739 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 PURAQ00577 322 aaKnown RBP15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 LAMC2Q13753 1193 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 DUOXA2Q1HG44 320 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 ERMARDQ5T6L9 678 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 MFSD5Q6N075 450 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 MPZL3Q6UWV2 235 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 SLC39A5Q6ZMH5 540 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 TSHZ1Q6ZSZ6 1077 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 RHPN2Q8IUC4 686 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 RHOT1Q8IXI2 618 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 PPTC7Q8NI37 304 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 TRAPPC12Q8WVT3 735 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 C1orf54Q8WWF1 131 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 ZNF606Q8WXB4 792 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 STARD7Q9NQZ5 370 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 ANK1P16157 1881 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 TRIP12Q14669 1992 aaPredicted RBP15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 ACKR2O00590 384 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 RIPK2O43353 540 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 HBP1O60381 514 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 SHBGP04278 402 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 TRPC3Q13507 836 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 SLC29A2Q14542 456 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 LLGL1Q15334 1064 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 PPP1R7Q15435 360 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 SGSM1Q2NKQ1 1148 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 FEZF2Q8TBJ5 459 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 GLT1D1Q96MS3 346 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 XPO6Q96QU8 1125 aaKnown RBP15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 HERPUD2Q9BSE4 406 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 DCLK3Q9C098 648 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 FZD8Q9H461 694 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 ACTR5Q9H9F9 607 aaPredicted RBP15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 PARVAQ9NVD7 372 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 LTBP2Q14767 1821 aa15.11■□□□□ 0.01
NIPAL3-203ENST00000358028 DCDC2CA8MYV0 355 aa15.1■□□□□ 0.01
NIPAL3-203ENST00000358028 TLR3O15455 904 aaKnown RBP15.1■□□□□ 0.01
NIPAL3-203ENST00000358028 LSM8O95777 96 aaKnown RBP15.1■□□□□ 0.01
NIPAL3-203ENST00000358028 TMEM191BP0C7N4 346 aa15.1■□□□□ 0.01
NIPAL3-203ENST00000358028 MMP8P22894 467 aa15.1■□□□□ 0.01
NIPAL3-203ENST00000358028 TMOD1P28289 359 aa15.1■□□□□ 0.01
NIPAL3-203ENST00000358028 TAS2R40P59535 323 aa15.1■□□□□ 0.01
NIPAL3-203ENST00000358028 KRT17Q04695 432 aa15.1■□□□□ 0.01
NIPAL3-203ENST00000358028 SNX1Q13596 522 aa15.1■□□□□ 0.01
NIPAL3-203ENST00000358028 PTK6Q13882 451 aa15.1■□□□□ 0.01
NIPAL3-203ENST00000358028 SNX17Q15036 470 aa15.1■□□□□ 0.01
NIPAL3-203ENST00000358028 ZNF568Q3ZCX4 644 aa15.1■□□□□ 0.01
NIPAL3-203ENST00000358028 TNFAIP8L3Q5GJ75 292 aa15.1■□□□□ 0.01
NIPAL3-203ENST00000358028 ATF7IP2Q5U623 682 aa15.1■□□□□ 0.01
NIPAL3-203ENST00000358028 CHRDL2Q6WN34 429 aa15.1■□□□□ 0.01
NIPAL3-203ENST00000358028 KATNAL2Q8IYT4 538 aa15.1■□□□□ 0.01
NIPAL3-203ENST00000358028 PPP1R13LQ8WUF5 828 aa15.1■□□□□ 0.01
NIPAL3-203ENST00000358028 NLRP4Q96MN2 994 aa15.1■□□□□ 0.01
NIPAL3-203ENST00000358028 SEMA4AQ9H3S1 761 aa15.1■□□□□ 0.01
NIPAL3-203ENST00000358028 CCDC134Q9H6E4 229 aa15.1■□□□□ 0.01
NIPAL3-203ENST00000358028 LRRC4CQ9HCJ2 640 aa15.1■□□□□ 0.01
NIPAL3-203ENST00000358028 PTPRHQ9HD43 1115 aa15.1■□□□□ 0.01
NIPAL3-203ENST00000358028 CHST7Q9NS84 486 aa15.1■□□□□ 0.01
NIPAL3-203ENST00000358028 CISHQ9NSE2 258 aa15.1■□□□□ 0.01
NIPAL3-203ENST00000358028 PCDH10Q9P2E7 1040 aa15.1■□□□□ 0.01
NIPAL3-203ENST00000358028 GAS8O95995 478 aa15.09■□□□□ 0.01
NIPAL3-203ENST00000358028 TNNC2P02585 160 aa15.09■□□□□ 0.01
NIPAL3-203ENST00000358028 CALB1P05937 261 aa15.09■□□□□ 0.01
NIPAL3-203ENST00000358028 ZNF286BP0CG31 522 aa15.09■□□□□ 0.01
NIPAL3-203ENST00000358028 CD58P19256 250 aa15.09■□□□□ 0.01
NIPAL3-203ENST00000358028 BRD2P25440 801 aaKnown RBP15.09■□□□□ 0.01
NIPAL3-203ENST00000358028 TFAMQ00059 246 aaKnown RBP15.09■□□□□ 0.01
NIPAL3-203ENST00000358028 TMEM132AQ24JP5 1023 aa15.09■□□□□ 0.01
NIPAL3-203ENST00000358028 ZNF699Q32M78 642 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms