RNA–Protein interactions for RNA: ENST00000357457.8

COL4A3BP-202, Transcript of collagen type IV alpha 3 binding protein, humanhuman

TSL 5

Gene COL4A3BP, Length 886 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BP-202ENST00000357457 TSC2P49815 1807 aa9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 MYO18AQ92614 2054 aaKnown RBP9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 ASCC3Q8N3C0 2202 aaKnown RBP9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 NPHP3-ACAD11A0A0J9YXS1 232 aa9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 SLC26A4O43511 780 aa9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 RPP40O75818 363 aaKnown RBP9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 HAPLN1P10915 354 aaPredicted RBP9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 HMGA1P17096 107 aaKnown RBP9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 DDX6P26196 483 aaKnown RBP eCLIP9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 MATR3P43243 847 aaKnown RBP eCLIP9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 LIG4P49917 911 aa9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 ZNF131P52739 623 aa9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 CYP4F8P98187 520 aa9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 POU5F1Q01860 360 aaKnown RBP9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 GRSF1Q12849 480 aaKnown RBP eCLIP9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 RUNX3Q13761 415 aa9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 AASDHQ4L235 1098 aaPredicted RBP9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 TMEM119Q4V9L6 283 aa9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 SLC39A12Q504Y0 691 aa9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 STPG1Q5TH74 334 aa9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 SMYD5Q6GMV2 418 aa9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 JADE1Q6IE81 842 aa9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 SLC39A4Q6P5W5 647 aa9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 C12orf50Q8NA57 414 aaPredicted RBP9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 SPPL2BQ8TCT7 592 aa9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 ASB7Q9H672 318 aa9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 FBRSL1Q9HCM7 1045 aaKnown RBP9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 SH2B1Q9NRF2 756 aaPredicted RBP9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 C2CD2Q9Y426 696 aa9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 SPEGQ15772 3267 aa9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 THADAQ6YHU6 1953 aa9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 MYO16Q9Y6X6 1858 aa9.28□□□□□ -0.92
COL4A3BP-202ENST00000357457 DMXL2Q8TDJ6 3036 aa9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 CYB561D2O14569 222 aa9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 HNRNPDLO14979 420 aaKnown RBP9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 KCNK5O95279 499 aa9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 DRD1P21728 446 aa9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 PXNP49023 591 aaPredicted RBP9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 GALK1P51570 392 aa9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 NLRP12P59046 1061 aa9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 GTF2BQ00403 316 aa9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 AMPD2Q01433 879 aa9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 ZNF268Q14587 947 aaPredicted RBP9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 VEPH1Q14D04 833 aa9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 ZRSR1Q15695 479 aaKnown RBP9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 MGAT5BQ3V5L5 792 aa9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 PLK5Q496M5 336 aa9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 FBXO43Q4G163 708 aa9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 RILPL1Q5EBL4 403 aa9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 ARL6IP4Q66PJ3 421 aaKnown RBP9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 THEM5Q8N1Q8 247 aa9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 LRRC15Q8TF66 581 aa9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 USP13Q92995 863 aaPredicted RBP9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 BICD1Q96G01 975 aa9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 GCNAQ96QF7 691 aa9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 FIZ1Q96SL8 496 aa9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 PLIN2Q99541 437 aa9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 SEPT5Q99719 369 aaPredicted RBP9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 REEP2Q9BRK0 252 aa9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 MSTO1Q9BUK6 570 aa9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 SMG9Q9H0W8 520 aaKnown RBP9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 EBF3Q9H4W6 596 aa9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 VPS45Q9NRW7 570 aa9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 TDP1Q9NUW8 608 aa9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 SLC8A2Q9UPR5 921 aa9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 CCL26Q9Y258 94 aa9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 PCDHGA4Q9Y5G9 962 aa9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 STYXL1Q9Y6J8 313 aa9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 ATRXP46100 2492 aa9.27□□□□□ -0.93
COL4A3BP-202ENST00000357457 TRAK2O60296 914 aa9.26□□□□□ -0.93
COL4A3BP-202ENST00000357457 RNF40O75150 1001 aa9.26□□□□□ -0.93
COL4A3BP-202ENST00000357457 EGFP01133 1207 aa9.26□□□□□ -0.93
COL4A3BP-202ENST00000357457 NFICP08651 508 aa9.26□□□□□ -0.93
COL4A3BP-202ENST00000357457 CCDC192P0DO97 292 aa9.26□□□□□ -0.93
COL4A3BP-202ENST00000357457 ABCD1P33897 745 aa9.26□□□□□ -0.93
COL4A3BP-202ENST00000357457 GJA4P35212 333 aa9.26□□□□□ -0.93
COL4A3BP-202ENST00000357457 AVPR1AP37288 418 aa9.26□□□□□ -0.93
COL4A3BP-202ENST00000357457 TAF6P49848 677 aa9.26□□□□□ -0.93
COL4A3BP-202ENST00000357457 TMEM132DQ14C87 1099 aa9.26□□□□□ -0.93
COL4A3BP-202ENST00000357457 PDGFRLQ15198 375 aa9.26□□□□□ -0.93
COL4A3BP-202ENST00000357457 CCDC6Q16204 474 aa9.26□□□□□ -0.93
COL4A3BP-202ENST00000357457 WSCD1Q658N2 575 aa9.26□□□□□ -0.93
COL4A3BP-202ENST00000357457 TRIM68Q6AZZ1 485 aa9.26□□□□□ -0.93
COL4A3BP-202ENST00000357457 SYT13Q7L8C5 426 aa9.26□□□□□ -0.93
COL4A3BP-202ENST00000357457 MON1AQ86VX9 555 aa9.26□□□□□ -0.93
COL4A3BP-202ENST00000357457 DCP1BQ8IZD4 617 aaKnown RBP9.26□□□□□ -0.93
COL4A3BP-202ENST00000357457 MAB21L3Q8N8X9 362 aa9.26□□□□□ -0.93
COL4A3BP-202ENST00000357457 RIN3Q8TB24 985 aa9.26□□□□□ -0.93
COL4A3BP-202ENST00000357457 GIPC2Q8TF65 315 aa9.26□□□□□ -0.93
COL4A3BP-202ENST00000357457 AK8Q96MA6 479 aa9.26□□□□□ -0.93
COL4A3BP-202ENST00000357457 KIF2CQ99661 725 aa9.26□□□□□ -0.93
COL4A3BP-202ENST00000357457 DUSP15Q9H1R2 295 aaPredicted RBP9.26□□□□□ -0.93
COL4A3BP-202ENST00000357457 ST6GALNAC4Q9H4F1 302 aa9.26□□□□□ -0.93
COL4A3BP-202ENST00000357457 KIF9Q9HAQ2 790 aa9.26□□□□□ -0.93
COL4A3BP-202ENST00000357457 PARVGQ9HBI0 331 aa9.26□□□□□ -0.93
COL4A3BP-202ENST00000357457 BLOC1S4Q9NUP1 217 aa9.26□□□□□ -0.93
COL4A3BP-202ENST00000357457 EBF1Q9UH73 591 aa9.26□□□□□ -0.93
COL4A3BP-202ENST00000357457 PTPRDP23468 1912 aa9.26□□□□□ -0.93
COL4A3BP-202ENST00000357457 MYOFQ9NZM1 2061 aa9.25□□□□□ -0.93
COL4A3BP-202ENST00000357457 BCLAF3A2AJT9 711 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms