RNA–Protein interactions for RNA: ENST00000356800.6

SMARCD3-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 1,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-202ENST00000356800 NSFP46459 744 aaKnown RBP19.25■□□□□ 0.67
SMARCD3-202ENST00000356800 EPHB4P54760 987 aa19.25■□□□□ 0.67
SMARCD3-202ENST00000356800 PTP4A2Q12974 167 aa19.25■□□□□ 0.67
SMARCD3-202ENST00000356800 C2CD6Q53TS8 623 aa19.25■□□□□ 0.67
SMARCD3-202ENST00000356800 OTOP2Q7RTS6 562 aa19.25■□□□□ 0.67
SMARCD3-202ENST00000356800 LRRC43Q8N309 656 aa19.25■□□□□ 0.67
SMARCD3-202ENST00000356800 TMEM35BQ8NCS4 154 aa19.25■□□□□ 0.67
SMARCD3-202ENST00000356800 RC3H2Q9HBD1 1191 aaKnown RBP19.25■□□□□ 0.67
SMARCD3-202ENST00000356800 DDX43Q9NXZ2 648 aaKnown RBP19.25■□□□□ 0.67
SMARCD3-202ENST00000356800 PRKAG2Q9UGJ0 569 aa19.25■□□□□ 0.67
SMARCD3-202ENST00000356800 CHORDC1Q9UHD1 332 aaPredicted RBP19.25■□□□□ 0.67
SMARCD3-202ENST00000356800 PCDHGC5Q9Y5F6 944 aa19.25■□□□□ 0.67
SMARCD3-202ENST00000356800 RIOK3O14730 519 aaKnown RBP19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 EFCAB14O75071 495 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 URI1O94763 535 aaPredicted RBP19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 BAIAP3O94812 1187 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 LHX1P48742 406 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 PSMC1P62191 440 aaKnown RBP19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 GPC5P78333 572 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 TUBB2AQ13885 445 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 IFI16Q16666 785 aaKnown RBP19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 GOLGA7BQ2TAP0 167 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 ARHGAP17Q68EM7 881 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 B3GALNT2Q8NCR0 500 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 RFFLQ8WZ73 363 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 ZNF689Q96CS4 500 aaPredicted RBP19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 TUBB2BQ9BVA1 445 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 ZNF518BQ9C0D4 1074 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 OSGEPQ9NPF4 335 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 MARCH5Q9NX47 278 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 TSPAN16Q9UKR8 245 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 PCDHB8Q9UN66 801 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 COG5Q9UP83 839 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 JRKLQ9Y4A0 524 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 M0QYV0 167 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 CYP1A2P05177 515 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 GALTP07902 379 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 CCDC130P13994 396 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 MMP8P22894 467 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 PBX3P40426 434 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 FPGSQ05932 587 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 PPIGQ13427 754 aaKnown RBP eCLIP19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 TCEAL1Q15170 157 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 PKDCCQ504Y2 493 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 FAM117BQ6P1L5 589 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 LLGL2Q6P1M3 1020 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 MMS22LQ6ZRQ5 1243 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 ZNF365Q70YC5 407 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 TTC30AQ86WT1 665 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 UBA3Q8TBC4 463 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 SLC35G2Q8TBE7 412 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 ZNF653Q96CK0 615 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 TNIP3Q96KP6 325 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 C11orf70Q9BRQ4 267 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 TMEM175Q9BSA9 504 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 CWH43Q9H720 699 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 CRTAC1Q9NQ79 661 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 GTF3C4Q9UKN8 822 aa19.24■□□□□ 0.67
SMARCD3-202ENST00000356800 ALDH2P05091 517 aa19.23■□□□□ 0.67
SMARCD3-202ENST00000356800 PTPN1P18031 435 aaKnown RBP19.23■□□□□ 0.67
SMARCD3-202ENST00000356800 TYMPP19971 482 aa19.23■□□□□ 0.67
SMARCD3-202ENST00000356800 TKTP29401 623 aaKnown RBP19.23■□□□□ 0.67
SMARCD3-202ENST00000356800 GPD2P43304 727 aa19.23■□□□□ 0.67
SMARCD3-202ENST00000356800 STILQ15468 1287 aa19.23■□□□□ 0.67
SMARCD3-202ENST00000356800 PAPD7Q5XG87 772 aaKnown RBP19.23■□□□□ 0.67
SMARCD3-202ENST00000356800 TMEM173Q86WV6 379 aaPredicted RBP19.23■□□□□ 0.67
SMARCD3-202ENST00000356800 SPATA18Q8TC71 538 aa19.23■□□□□ 0.67
SMARCD3-202ENST00000356800 ADAM22Q9P0K1 906 aa19.23■□□□□ 0.67
SMARCD3-202ENST00000356800 ADAM28Q9UKQ2 775 aa19.23■□□□□ 0.67
SMARCD3-202ENST00000356800 DSEQ9UL01 958 aa19.23■□□□□ 0.67
SMARCD3-202ENST00000356800 FAN1Q9Y2M0 1017 aa19.23■□□□□ 0.67
SMARCD3-202ENST00000356800 CEP83Q9Y592 693 aa19.23■□□□□ 0.67
SMARCD3-202ENST00000356800 GRID2IPA4D2P6 1211 aa19.22■□□□□ 0.67
SMARCD3-202ENST00000356800 TADA2AO75478 443 aa19.22■□□□□ 0.67
SMARCD3-202ENST00000356800 SYN1P17600 705 aa19.22■□□□□ 0.67
SMARCD3-202ENST00000356800 RRM1P23921 792 aa19.22■□□□□ 0.67
SMARCD3-202ENST00000356800 NAP1L1P55209 391 aaKnown RBP19.22■□□□□ 0.67
SMARCD3-202ENST00000356800 BCAR1P56945 870 aa19.22■□□□□ 0.67
SMARCD3-202ENST00000356800 C1QBPQ07021 282 aaKnown RBP19.22■□□□□ 0.67
SMARCD3-202ENST00000356800 PTPN20Q4JDL3 420 aa19.22■□□□□ 0.67
SMARCD3-202ENST00000356800 PPP1R2P3Q6NXS1 205 aa19.22■□□□□ 0.67
SMARCD3-202ENST00000356800 PHLDB2Q86SQ0 1253 aa19.22■□□□□ 0.67
SMARCD3-202ENST00000356800 RHOT2Q8IXI1 618 aa19.22■□□□□ 0.67
SMARCD3-202ENST00000356800 MYRIPQ8NFW9 859 aa19.22■□□□□ 0.67
SMARCD3-202ENST00000356800 TPCN2Q8NHX9 752 aa19.22■□□□□ 0.67
SMARCD3-202ENST00000356800 BCL7CQ8WUZ0 217 aaPredicted RBP19.22■□□□□ 0.67
SMARCD3-202ENST00000356800 VCPIP1Q96JH7 1222 aa19.22■□□□□ 0.67
SMARCD3-202ENST00000356800 CALR3Q96L12 384 aaKnown RBP19.22■□□□□ 0.67
SMARCD3-202ENST00000356800 SYT15Q9BQS2 421 aa19.22■□□□□ 0.67
SMARCD3-202ENST00000356800 COLEC11Q9BWP8 271 aa19.22■□□□□ 0.67
SMARCD3-202ENST00000356800 CNOT8Q9UFF9 292 aaKnown RBP19.22■□□□□ 0.67
SMARCD3-202ENST00000356800 MRFAP1Q9Y605 127 aa19.22■□□□□ 0.67
SMARCD3-202ENST00000356800 KIAA1671Q9BY89 1806 aa19.22■□□□□ 0.67
SMARCD3-202ENST00000356800 NT5C1B-RDH14C9J2C7 533 aa19.21■□□□□ 0.67
SMARCD3-202ENST00000356800 FGBP02675 491 aa19.21■□□□□ 0.67
SMARCD3-202ENST00000356800 NOP2P46087 812 aaKnown RBP19.21■□□□□ 0.67
SMARCD3-202ENST00000356800 AMPD2Q01433 879 aa19.21■□□□□ 0.67
SMARCD3-202ENST00000356800 OVOS1Q6IE37 1185 aa19.21■□□□□ 0.67
SMARCD3-202ENST00000356800 METTL23Q86XA0 190 aa19.21■□□□□ 0.67
SMARCD3-202ENST00000356800 SLC2A14Q8TDB8 520 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms