RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 PLD1Q13393 1074 aa17.03■□□□□ 0.32
FDPS-201ENST00000356657 ADAM15Q13444 863 aa17.03■□□□□ 0.32
FDPS-201ENST00000356657 SLC39A12Q504Y0 691 aa17.03■□□□□ 0.32
FDPS-201ENST00000356657 FIGNQ5HY92 759 aa17.03■□□□□ 0.32
FDPS-201ENST00000356657 ARHGEF19Q8IW93 802 aa17.03■□□□□ 0.32
FDPS-201ENST00000356657 KREMEN2Q8NCW0 462 aa17.03■□□□□ 0.32
FDPS-201ENST00000356657 SHC3Q92529 594 aa17.03■□□□□ 0.32
FDPS-201ENST00000356657 PCMTD1Q96MG8 357 aaPredicted RBP17.03■□□□□ 0.32
FDPS-201ENST00000356657 NUP58Q9BVL2 599 aa17.03■□□□□ 0.32
FDPS-201ENST00000356657 EDEM3Q9BZQ6 932 aa17.03■□□□□ 0.32
FDPS-201ENST00000356657 ELOVL4Q9GZR5 314 aa17.03■□□□□ 0.32
FDPS-201ENST00000356657 UTP3Q9NQZ2 479 aaKnown RBP eCLIP17.03■□□□□ 0.321e-6■■■■■ 99.4
FDPS-201ENST00000356657 ZDHHC7Q9NXF8 308 aa17.03■□□□□ 0.32
FDPS-201ENST00000356657 PCDHB5Q9Y5E4 795 aa17.03■□□□□ 0.32
FDPS-201ENST00000356657 MTMR11A4FU01 709 aa17.02■□□□□ 0.32
FDPS-201ENST00000356657 PER2O15055 1255 aa17.02■□□□□ 0.32
FDPS-201ENST00000356657 ADAM12O43184 909 aa17.02■□□□□ 0.32
FDPS-201ENST00000356657 PDGFRBP09619 1106 aa17.02■□□□□ 0.32
FDPS-201ENST00000356657 HNRNPA1P09651 372 aaKnown RBP eCLIP17.02■□□□□ 0.32
FDPS-201ENST00000356657 ACO1P21399 889 aaKnown RBP17.02■□□□□ 0.32
FDPS-201ENST00000356657 MAGEA11P43364 429 aa17.02■□□□□ 0.32
FDPS-201ENST00000356657 STILQ15468 1287 aa17.02■□□□□ 0.32
FDPS-201ENST00000356657 VSTM1Q6UX27 236 aa17.02■□□□□ 0.32
FDPS-201ENST00000356657 RRAGAQ7L523 313 aa17.02■□□□□ 0.32
FDPS-201ENST00000356657 PALB2Q86YC2 1186 aa17.02■□□□□ 0.32
FDPS-201ENST00000356657 CMASQ8NFW8 434 aaPredicted RBP17.02■□□□□ 0.32
FDPS-201ENST00000356657 TMEM176AQ96HP8 235 aa17.02■□□□□ 0.32
FDPS-201ENST00000356657 KREMEN1Q96MU8 473 aa17.02■□□□□ 0.32
FDPS-201ENST00000356657 NAP1L5Q96NT1 182 aaPredicted RBP17.02■□□□□ 0.32
FDPS-201ENST00000356657 NAA15Q9BXJ9 866 aaKnown RBP17.02■□□□□ 0.32
FDPS-201ENST00000356657 STK33Q9BYT3 514 aa17.02■□□□□ 0.32
FDPS-201ENST00000356657 SFXN1Q9H9B4 322 aa17.02■□□□□ 0.32
FDPS-201ENST00000356657 MAN1C1Q9NR34 630 aa17.02■□□□□ 0.32
FDPS-201ENST00000356657 FAM207AQ9NSI2 230 aaPredicted RBP17.02■□□□□ 0.32
FDPS-201ENST00000356657 DNAJC12Q9UKB3 198 aa17.02■□□□□ 0.32
FDPS-201ENST00000356657 MYO6Q9UM54 1294 aa17.02■□□□□ 0.32
FDPS-201ENST00000356657 COG5Q9UP83 839 aa17.02■□□□□ 0.32
FDPS-201ENST00000356657 ACAT1P24752 427 aaKnown RBP17.01■□□□□ 0.31
FDPS-201ENST00000356657 ZNF132P52740 706 aa17.01■□□□□ 0.31
FDPS-201ENST00000356657 ARPP19P56211 112 aa17.01■□□□□ 0.31
FDPS-201ENST00000356657 BPIFB4P59827 614 aa17.01■□□□□ 0.31
FDPS-201ENST00000356657 ADCY1Q08828 1119 aa17.01■□□□□ 0.31
FDPS-201ENST00000356657 MEA1Q16626 185 aa17.01■□□□□ 0.31
FDPS-201ENST00000356657 DPY19L2P1Q6NXN4 242 aa17.01■□□□□ 0.31
FDPS-201ENST00000356657 TMEM270Q6UE05 265 aa17.01■□□□□ 0.31
FDPS-201ENST00000356657 GAS2L3Q86XJ1 694 aa17.01■□□□□ 0.31
FDPS-201ENST00000356657 SPATA2LQ8IUW3 424 aaPredicted RBP17.01■□□□□ 0.31
FDPS-201ENST00000356657 GLYCTKQ8IVS8 523 aa17.01■□□□□ 0.31
FDPS-201ENST00000356657 WHAMMQ8TF30 809 aa17.01■□□□□ 0.31
FDPS-201ENST00000356657 RBSNQ9H1K0 784 aa17.01■□□□□ 0.31
FDPS-201ENST00000356657 GANQ9H2C0 597 aa17.01■□□□□ 0.31
FDPS-201ENST00000356657 CRTAC1Q9NQ79 661 aa17.01■□□□□ 0.31
FDPS-201ENST00000356657 IFNKQ9P0W0 207 aa17.01■□□□□ 0.31
FDPS-201ENST00000356657 CEP72Q9P209 647 aa17.01■□□□□ 0.31
FDPS-201ENST00000356657 THEGQ9P2T0 379 aa17.01■□□□□ 0.31
FDPS-201ENST00000356657 GTF3C4Q9UKN8 822 aa17.01■□□□□ 0.31
FDPS-201ENST00000356657 PCDHB4Q9Y5E5 795 aa17.01■□□□□ 0.31
FDPS-201ENST00000356657 ITIH6Q6UXX5 1313 aa17.01■□□□□ 0.31
FDPS-201ENST00000356657 MYH10P35580 1976 aa17.01■□□□□ 0.31
FDPS-201ENST00000356657 MYBPHLA2RUH7 354 aa17■□□□□ 0.31
FDPS-201ENST00000356657 PRRG1O14668 218 aa17■□□□□ 0.31
FDPS-201ENST00000356657 TEX33O43247 280 aa17■□□□□ 0.31
FDPS-201ENST00000356657 ZMYND10O75800 440 aa17■□□□□ 0.31
FDPS-201ENST00000356657 RAD23BP54727 409 aa17■□□□□ 0.31
FDPS-201ENST00000356657 PSMC1P62191 440 aaKnown RBP17■□□□□ 0.31
FDPS-201ENST00000356657 RNF19BQ6ZMZ0 732 aa17■□□□□ 0.31
FDPS-201ENST00000356657 ELMO3Q96BJ8 720 aa17■□□□□ 0.31
FDPS-201ENST00000356657 PCED1BQ96HM7 432 aa17■□□□□ 0.31
FDPS-201ENST00000356657 IGFLR1Q9H665 355 aa17■□□□□ 0.31
FDPS-201ENST00000356657 PRDM6Q9NQX0 595 aa17■□□□□ 0.31
FDPS-201ENST00000356657 UNC80Q8N2C7 3258 aa17■□□□□ 0.31
FDPS-201ENST00000356657 SPDYE4A6NLX3 237 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 NOL4O94818 638 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 GLP2RO95838 553 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 C8AP07357 584 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 OR4Q2P0C623 313 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 CCDC172P0C7W6 258 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 VDRP11473 427 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 EPCAMP16422 314 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 PBX1P40424 430 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 RPL10AP62906 217 aaKnown RBP16.99■□□□□ 0.31
FDPS-201ENST00000356657 ITIH3Q06033 890 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 RAPGEF1Q13905 1077 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 TRIM14Q14142 442 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 MDH1BQ5I0G3 518 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 ARHGAP17Q68EM7 881 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 IQCEQ6IPM2 695 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 CACNA2D4Q7Z3S7 1137 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 ACOT1Q86TX2 421 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 LRRTM3Q86VH5 581 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 SLC4A11Q8NBS3 891 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 RBBP8NLQ8NC74 664 aaPredicted RBP16.99■□□□□ 0.31
FDPS-201ENST00000356657 MYLPFQ96A32 169 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 SMARCD1Q96GM5 515 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 SPAG5Q96R06 1193 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 TMEM209Q96SK2 561 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 HNRNPABQ99729 332 aaKnown RBP16.99■□□□□ 0.31
FDPS-201ENST00000356657 XPO4Q9C0E2 1151 aaKnown RBP16.99■□□□□ 0.31
FDPS-201ENST00000356657 DPEP3Q9H4B8 488 aa16.99■□□□□ 0.31
FDPS-201ENST00000356657 CYP4F11Q9HBI6 524 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms