RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 DYNC1LI2O43237 492 aaPredicted RBP16.72■□□□□ 0.27
RXRA-201ENST00000356384 RAB14P61106 215 aa16.72■□□□□ 0.27
RXRA-201ENST00000356384 CSTF3Q12996 717 aaKnown RBP16.72■□□□□ 0.27
RXRA-201ENST00000356384 NT5C1AQ9BXI3 368 aa16.72■□□□□ 0.27
RXRA-201ENST00000356384 RSAD1Q9HA92 442 aa16.72■□□□□ 0.27
RXRA-201ENST00000356384 MRGBPQ9NV56 204 aa16.72■□□□□ 0.27
RXRA-201ENST00000356384 KCNQ2O43526 872 aa16.72■□□□□ 0.27
RXRA-201ENST00000356384 GPD1P21695 349 aa16.72■□□□□ 0.27
RXRA-201ENST00000356384 PTGER2P43116 358 aa16.72■□□□□ 0.27
RXRA-201ENST00000356384 HIST2H2ACQ16777 129 aaPredicted RBP16.72■□□□□ 0.27
RXRA-201ENST00000356384 HIST2H2AA3Q6FI13 130 aa16.72■□□□□ 0.27
RXRA-201ENST00000356384 EFL1Q7Z2Z2 1120 aaKnown RBP16.72■□□□□ 0.27
RXRA-201ENST00000356384 ADSSL1Q8N142 457 aa16.72■□□□□ 0.27
RXRA-201ENST00000356384 WWOXQ9NZC7 414 aa16.72■□□□□ 0.27
RXRA-201ENST00000356384 CRLS1Q9UJA2 301 aa16.72■□□□□ 0.27
RXRA-201ENST00000356384 PRG3Q9Y2Y8 225 aaPredicted RBP16.72■□□□□ 0.27
RXRA-201ENST00000356384 CYP27B1O15528 508 aa16.71■□□□□ 0.27
RXRA-201ENST00000356384 CDC16Q13042 620 aa16.71■□□□□ 0.27
RXRA-201ENST00000356384 GOLGA7BQ2TAP0 167 aa16.71■□□□□ 0.27
RXRA-201ENST00000356384 ELP3Q9H9T3 547 aa16.71■□□□□ 0.27
RXRA-201ENST00000356384 SEC24CP53992 1094 aa16.71■□□□□ 0.27
RXRA-201ENST00000356384 ALFQ53S48 1182 aa16.71■□□□□ 0.27
RXRA-201ENST00000356384 PPP1R2P1Q96PQ5 205 aa16.71■□□□□ 0.27
RXRA-201ENST00000356384 TRIM8Q9BZR9 551 aa16.71■□□□□ 0.27
RXRA-201ENST00000356384 GOLPH3Q9H4A6 298 aa16.71■□□□□ 0.27
RXRA-201ENST00000356384 METTL5Q9NRN9 209 aaKnown RBP16.71■□□□□ 0.27
RXRA-201ENST00000356384 APPL1Q9UKG1 709 aa16.71■□□□□ 0.27
RXRA-201ENST00000356384 GTF2A1LQ9UNN4 478 aa16.71■□□□□ 0.27
RXRA-201ENST00000356384 SCAF8Q9UPN6 1271 aaKnown RBP16.71■□□□□ 0.27
RXRA-201ENST00000356384 QRICH2Q9H0J4 1663 aa16.71■□□□□ 0.27
RXRA-201ENST00000356384 FAM205CA6NFA0 338 aa16.71■□□□□ 0.27
RXRA-201ENST00000356384 GOLGA8TH3BQL2 631 aa16.71■□□□□ 0.27
RXRA-201ENST00000356384 PYGMP11217 842 aa16.71■□□□□ 0.27
RXRA-201ENST00000356384 BAATQ14032 418 aaPredicted RBP16.71■□□□□ 0.27
RXRA-201ENST00000356384 GPAT2Q6NUI2 795 aa16.71■□□□□ 0.27
RXRA-201ENST00000356384 ERAP2Q6P179 960 aa16.71■□□□□ 0.27
RXRA-201ENST00000356384 RASGRP2Q7LDG7 609 aa16.71■□□□□ 0.27
RXRA-201ENST00000356384 ZIM3Q96PE6 472 aa16.71■□□□□ 0.27
RXRA-201ENST00000356384 SMARCAD1Q9H4L7 1026 aa16.71■□□□□ 0.27
RXRA-201ENST00000356384 RBP3P10745 1247 aa16.71■□□□□ 0.26
RXRA-201ENST00000356384 AVPR1AP37288 418 aa16.71■□□□□ 0.26
RXRA-201ENST00000356384 EMC2Q15006 297 aa16.71■□□□□ 0.26
RXRA-201ENST00000356384 TRIM16LQ309B1 348 aa16.71■□□□□ 0.26
RXRA-201ENST00000356384 TRIM65Q6PJ69 517 aa16.71■□□□□ 0.26
RXRA-201ENST00000356384 BARGINQ6ZT62 677 aa16.71■□□□□ 0.26
RXRA-201ENST00000356384 SGMS1Q86VZ5 419 aa16.71■□□□□ 0.26
RXRA-201ENST00000356384 CHSY1Q86X52 802 aa16.71■□□□□ 0.26
RXRA-201ENST00000356384 ROPN1BQ9BZX4 212 aaPredicted RBP16.71■□□□□ 0.26
RXRA-201ENST00000356384 ROPN1Q9HAT0 212 aaPredicted RBP16.71■□□□□ 0.26
RXRA-201ENST00000356384 CCT8L1PA6NM43 557 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 DDHD2O94830 711 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 HLA-DRAP01903 254 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 COPAP53621 1224 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 IRX1P78414 480 aaPredicted RBP16.7■□□□□ 0.26
RXRA-201ENST00000356384 ZC2HC1CQ53FD0 456 aaPredicted RBP16.7■□□□□ 0.26
RXRA-201ENST00000356384 E4F1Q66K89 784 aaPredicted RBP16.7■□□□□ 0.26
RXRA-201ENST00000356384 HERC5Q9UII4 1024 aaKnown RBP16.7■□□□□ 0.26
RXRA-201ENST00000356384 ANKARQ7Z5J8 1434 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 FXR1P51114 621 aaKnown RBP eCLIP16.7■□□□□ 0.26
RXRA-201ENST00000356384 DDX39BQ13838 428 aaKnown RBP16.7■□□□□ 0.26
RXRA-201ENST00000356384 ARID3BQ8IVW6 561 aaPredicted RBP16.7■□□□□ 0.26
RXRA-201ENST00000356384 COL15A1P39059 1388 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 TRPC5OSA6NMA1 111 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 CD4P01730 458 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 DPYDQ12882 1025 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 EPC2Q52LR7 807 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 PLA2G4FQ68DD2 849 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 PNKPQ96T60 521 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 CHORDC1Q9UHD1 332 aaPredicted RBP16.7■□□□□ 0.26
RXRA-201ENST00000356384 LMTK2Q8IWU2 1503 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.7■□□□□ 0.26
RXRA-201ENST00000356384 SKAP2O75563 359 aaPredicted RBP16.7■□□□□ 0.26
RXRA-201ENST00000356384 SOAT2O75908 522 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 ITGA4P13612 1032 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 GTF2H1P32780 548 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 ACADSBP45954 432 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 CYP4A22Q5TCH4 519 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 SLC44A2Q8IWA5 706 aaPredicted RBP16.7■□□□□ 0.26
RXRA-201ENST00000356384 MIER2Q8N344 545 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 ACSF2Q96CM8 615 aaPredicted RBP16.7■□□□□ 0.26
RXRA-201ENST00000356384 CCSER1Q9C0I3 900 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 NAGPAQ9UK23 515 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 VWA5AO00534 786 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 C6orf222P0C671 652 aaPredicted RBP16.7■□□□□ 0.26
RXRA-201ENST00000356384 NCAM1P13591 858 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 TARSP26639 723 aaKnown RBP16.7■□□□□ 0.26
RXRA-201ENST00000356384 RGS2P41220 211 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 RPS7P62081 194 aaKnown RBP16.7■□□□□ 0.26
RXRA-201ENST00000356384 CDC42EP1Q00587 391 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 OVGP1Q12889 678 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 NAPEPLDQ6IQ20 393 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 CNPY4Q8N129 248 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 PPP2R3CQ969Q6 453 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 C7orf25Q9BPX7 421 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 VPS33BQ9H267 617 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 RHBDL2Q9NX52 303 aa16.7■□□□□ 0.26
RXRA-201ENST00000356384 PSMA4P25789 261 aaKnown RBP16.69■□□□□ 0.26
RXRA-201ENST00000356384 OTOAQ7RTW8 1153 aa16.69■□□□□ 0.26
RXRA-201ENST00000356384 PPIL6Q8IXY8 311 aa16.69■□□□□ 0.26
RXRA-201ENST00000356384 FOXP3Q9BZS1 431 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms