RNA–Protein interactions for RNA: ENST00000355572.6

PDLIM7-201, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best) BASIC

Gene PDLIM7, Length 977 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-201ENST00000355572 SIT1Q9Y3P8 196 aa17.97■□□□□ 0.47
PDLIM7-201ENST00000355572 KANSL1LA0AUZ9 987 aa17.96■□□□□ 0.47
PDLIM7-201ENST00000355572 HUS1O60921 280 aa17.96■□□□□ 0.47
PDLIM7-201ENST00000355572 GDI1P31150 447 aa17.96■□□□□ 0.47
PDLIM7-201ENST00000355572 DLG4P78352 724 aa17.96■□□□□ 0.47
PDLIM7-201ENST00000355572 DDR2Q16832 855 aa17.96■□□□□ 0.47
PDLIM7-201ENST00000355572 ASCL5Q7RTU5 278 aa17.96■□□□□ 0.47
PDLIM7-201ENST00000355572 FRMD5Q7Z6J6 570 aa17.96■□□□□ 0.47
PDLIM7-201ENST00000355572 ARID3BQ8IVW6 561 aaPredicted RBP17.96■□□□□ 0.47
PDLIM7-201ENST00000355572 C12orf56Q8IXR9 622 aa17.96■□□□□ 0.47
PDLIM7-201ENST00000355572 LEMD2Q8NC56 503 aa17.96■□□□□ 0.47
PDLIM7-201ENST00000355572 SPPL2BQ8TCT7 592 aa17.96■□□□□ 0.47
PDLIM7-201ENST00000355572 ZFYVE19Q96K21 471 aa17.96■□□□□ 0.47
PDLIM7-201ENST00000355572 ACBD6Q9BR61 282 aa17.96■□□□□ 0.47
PDLIM7-201ENST00000355572 ATXN3LQ9H3M9 355 aa17.96■□□□□ 0.47
PDLIM7-201ENST00000355572 DMAC2Q9NW81 257 aa17.96■□□□□ 0.47
PDLIM7-201ENST00000355572 MYO16Q9Y6X6 1858 aa17.96■□□□□ 0.47
PDLIM7-201ENST00000355572 PRPF40AO75400 957 aaKnown RBP17.95■□□□□ 0.46
PDLIM7-201ENST00000355572 TNNC2P02585 160 aa17.95■□□□□ 0.46
PDLIM7-201ENST00000355572 F11P03951 625 aa17.95■□□□□ 0.46
PDLIM7-201ENST00000355572 NBL1P41271 181 aa17.95■□□□□ 0.46
PDLIM7-201ENST00000355572 SOX9P48436 509 aa17.95■□□□□ 0.46
PDLIM7-201ENST00000355572 MYL6P60660 151 aa17.95■□□□□ 0.46
PDLIM7-201ENST00000355572 DPYDQ12882 1025 aa17.95■□□□□ 0.46
PDLIM7-201ENST00000355572 UBXN2BQ14CS0 331 aa17.95■□□□□ 0.46
PDLIM7-201ENST00000355572 DUOXA2Q1HG44 320 aa17.95■□□□□ 0.46
PDLIM7-201ENST00000355572 GPR158Q5T848 1215 aa17.95■□□□□ 0.46
PDLIM7-201ENST00000355572 TOP6BLQ8N6T0 577 aa17.95■□□□□ 0.46
PDLIM7-201ENST00000355572 FSIP1Q8NA03 581 aa17.95■□□□□ 0.46
PDLIM7-201ENST00000355572 FAM200AQ8TCP9 573 aa17.95■□□□□ 0.46
PDLIM7-201ENST00000355572 SLC46A2Q9BY10 475 aa17.95■□□□□ 0.46
PDLIM7-201ENST00000355572 XYLT2Q9H1B5 865 aa17.95■□□□□ 0.46
PDLIM7-201ENST00000355572 SLITRK6Q9H5Y7 841 aa17.95■□□□□ 0.46
PDLIM7-201ENST00000355572 EXOC1Q9NV70 894 aa17.95■□□□□ 0.46
PDLIM7-201ENST00000355572 TMEM30AQ9NV96 361 aa17.95■□□□□ 0.46
PDLIM7-201ENST00000355572 ASB3Q9Y575 518 aa17.95■□□□□ 0.46
PDLIM7-201ENST00000355572 PCDHB5Q9Y5E4 795 aa17.95■□□□□ 0.46
PDLIM7-201ENST00000355572 F5P12259 2224 aa17.95■□□□□ 0.46
PDLIM7-201ENST00000355572 MYH10P35580 1976 aa17.94■□□□□ 0.46
PDLIM7-201ENST00000355572 LRRIQ3A6PVS8 624 aaPredicted RBP17.94■□□□□ 0.46
PDLIM7-201ENST00000355572 VNN1O95497 513 aa17.94■□□□□ 0.46
PDLIM7-201ENST00000355572 RPN1P04843 607 aaKnown RBP17.94■□□□□ 0.46
PDLIM7-201ENST00000355572 PSMC3P17980 439 aa17.94■□□□□ 0.46
PDLIM7-201ENST00000355572 TNNI1P19237 187 aa17.94■□□□□ 0.46
PDLIM7-201ENST00000355572 SYKP43405 635 aa17.94■□□□□ 0.46
PDLIM7-201ENST00000355572 TUFMP49411 452 aaKnown RBP17.94■□□□□ 0.46
PDLIM7-201ENST00000355572 PRKCQQ04759 706 aa17.94■□□□□ 0.46
PDLIM7-201ENST00000355572 SURF1Q15526 300 aa17.94■□□□□ 0.46
PDLIM7-201ENST00000355572 C1orf220Q5T0J3 134 aa17.94■□□□□ 0.46
PDLIM7-201ENST00000355572 TDRD10Q5VZ19 366 aaKnown RBP17.94■□□□□ 0.46
PDLIM7-201ENST00000355572 FAM171BQ6P995 826 aa17.94■□□□□ 0.46
PDLIM7-201ENST00000355572 KRBA2Q6ZNG9 492 aa17.94■□□□□ 0.46
PDLIM7-201ENST00000355572 MFSD6LQ8IWD5 586 aa17.94■□□□□ 0.46
PDLIM7-201ENST00000355572 DCP1BQ8IZD4 617 aaKnown RBP17.94■□□□□ 0.46
PDLIM7-201ENST00000355572 TMEM86AQ8N2M4 240 aa17.94■□□□□ 0.46
PDLIM7-201ENST00000355572 TRMT61BQ9BVS5 477 aaKnown RBP17.94■□□□□ 0.46
PDLIM7-201ENST00000355572 DPEP3Q9H4B8 488 aa17.94■□□□□ 0.46
PDLIM7-201ENST00000355572 BRD9Q9H8M2 597 aa17.94■□□□□ 0.46
PDLIM7-201ENST00000355572 KIAA1586Q9HCI6 787 aa17.94■□□□□ 0.46
PDLIM7-201ENST00000355572 ATG2BQ96BY7 2078 aa17.94■□□□□ 0.46
PDLIM7-201ENST00000355572 PIEZO1Q92508 2521 aa17.94■□□□□ 0.46
PDLIM7-201ENST00000355572 KIAA1549LQ6ZVL6 1849 aa17.93■□□□□ 0.46
PDLIM7-201ENST00000355572 FAM170BA6NMN3 283 aa17.93■□□□□ 0.46
PDLIM7-201ENST00000355572 PROB1E7EW31 1015 aa17.93■□□□□ 0.46
PDLIM7-201ENST00000355572 PDGFRBP09619 1106 aa17.93■□□□□ 0.46
PDLIM7-201ENST00000355572 RFX1P22670 979 aa17.93■□□□□ 0.46
PDLIM7-201ENST00000355572 CACNA2D1P54289 1103 aa17.93■□□□□ 0.46
PDLIM7-201ENST00000355572 NLRP12P59046 1061 aa17.93■□□□□ 0.46
PDLIM7-201ENST00000355572 TSPY1Q01534 308 aa17.93■□□□□ 0.46
PDLIM7-201ENST00000355572 HS2ST1Q7LGA3 356 aa17.93■□□□□ 0.46
PDLIM7-201ENST00000355572 TTC8Q8TAM2 541 aa17.93■□□□□ 0.46
PDLIM7-201ENST00000355572 C2orf15Q8WU43 125 aaKnown RBP17.93■□□□□ 0.46
PDLIM7-201ENST00000355572 DNASE1L2Q92874 299 aa17.93■□□□□ 0.46
PDLIM7-201ENST00000355572 MYLPFQ96A32 169 aa17.93■□□□□ 0.46
PDLIM7-201ENST00000355572 SYT15Q9BQS2 421 aa17.93■□□□□ 0.46
PDLIM7-201ENST00000355572 SDCBP2Q9H190 292 aa17.93■□□□□ 0.46
PDLIM7-201ENST00000355572 MAPK8IP1Q9UQF2 711 aa17.93■□□□□ 0.46
PDLIM7-201ENST00000355572 CCL26Q9Y258 94 aa17.93■□□□□ 0.46
PDLIM7-201ENST00000355572 EXOC3O60645 756 aa17.92■□□□□ 0.46
PDLIM7-201ENST00000355572 C4BPAP04003 597 aaKnown RBP17.92■□□□□ 0.46
PDLIM7-201ENST00000355572 WARSP23381 471 aaKnown RBP17.92■□□□□ 0.46
PDLIM7-201ENST00000355572 HOXC13P31276 330 aa17.92■□□□□ 0.46
PDLIM7-201ENST00000355572 RAP1GAPP47736 663 aa17.92■□□□□ 0.46
PDLIM7-201ENST00000355572 MYL7Q01449 175 aa17.92■□□□□ 0.46
PDLIM7-201ENST00000355572 PFKPQ01813 784 aa17.92■□□□□ 0.46
PDLIM7-201ENST00000355572 TNK2Q07912 1038 aa17.92■□□□□ 0.46
PDLIM7-201ENST00000355572 FCHO2Q0JRZ9 810 aa17.92■□□□□ 0.46
PDLIM7-201ENST00000355572 TXNDC8Q6A555 127 aa17.92■□□□□ 0.46
PDLIM7-201ENST00000355572 ITIH5Q86UX2 942 aa17.92■□□□□ 0.46
PDLIM7-201ENST00000355572 PARD3BQ8TEW8 1205 aa17.92■□□□□ 0.46
PDLIM7-201ENST00000355572 CHFRQ96EP1 664 aa17.92■□□□□ 0.46
PDLIM7-201ENST00000355572 SLC22A12Q96S37 553 aa17.92■□□□□ 0.46
PDLIM7-201ENST00000355572 MAGED2Q9UNF1 606 aaPredicted RBP17.92■□□□□ 0.46
PDLIM7-201ENST00000355572 R4GN57 208 aa17.92■□□□□ 0.46
PDLIM7-201ENST00000355572 VPS13AQ96RL7 3174 aa17.91■□□□□ 0.46
PDLIM7-201ENST00000355572 A0A1W2PQ27 194 aa17.91■□□□□ 0.46
PDLIM7-201ENST00000355572 A0A1W2PQ64 194 aa17.91■□□□□ 0.46
PDLIM7-201ENST00000355572 A0A1W2PQD8 194 aa17.91■□□□□ 0.46
PDLIM7-201ENST00000355572 PRR23AA6NEV1 266 aa17.91■□□□□ 0.46
PDLIM7-201ENST00000355572 SLC38A8A6NNN8 435 aa17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms