RNA–Protein interactions for RNA: ENST00000355133.7

SCN8A-202, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best) BASIC

Gene SCN8A, Length 5,820 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-202ENST00000355133 RGS2P41220 211 aa13.77□□□□□ -0.21
SCN8A-202ENST00000355133 C2CD6Q53TS8 623 aa13.77□□□□□ -0.21
SCN8A-202ENST00000355133 CLEC4FQ8N1N0 589 aa13.77□□□□□ -0.21
SCN8A-202ENST00000355133 ATP6V0D2Q8N8Y2 350 aa13.77□□□□□ -0.21
SCN8A-202ENST00000355133 SGF29Q96ES7 293 aa13.77□□□□□ -0.21
SCN8A-202ENST00000355133 CPB2Q96IY4 423 aa13.77□□□□□ -0.21
SCN8A-202ENST00000355133 MTMR12Q9C0I1 747 aa13.77□□□□□ -0.21
SCN8A-202ENST00000355133 HPS5Q9UPZ3 1129 aa13.77□□□□□ -0.21
SCN8A-202ENST00000355133 VTNP04004 478 aa13.77□□□□□ -0.21
SCN8A-202ENST00000355133 EPB42P16452 691 aa13.77□□□□□ -0.21
SCN8A-202ENST00000355133 LVRNQ6Q4G3 990 aa13.77□□□□□ -0.21
SCN8A-202ENST00000355133 FBXO16Q8IX29 292 aaPredicted RBP13.77□□□□□ -0.21
SCN8A-202ENST00000355133 PPP1R2P1Q96PQ5 205 aa13.77□□□□□ -0.21
SCN8A-202ENST00000355133 COLEC11Q9BWP8 271 aa13.77□□□□□ -0.21
SCN8A-202ENST00000355133 BRD8Q9H0E9 1235 aa13.77□□□□□ -0.21
SCN8A-202ENST00000355133 SGPL1O95470 568 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 CASP4P49662 377 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 SLC15A2Q16348 729 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 BARGINQ6ZT62 677 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 ACOT1Q86TX2 421 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 ARHGAP18Q8N392 663 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 RDM1Q8NG50 284 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 SPATA31A5Q5VU36 1347 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 SPATA31A7Q8IWB4 1347 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 HEATR9A2RTY3 570 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 B3GAT3O94766 335 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 AVPR1AP37288 418 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 CENPCQ03188 943 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 PTK6Q13882 451 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 CNGA3Q16281 694 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 NAPEPLDQ6IQ20 393 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 ACAD10Q6JQN1 1059 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 ARMC6Q6NXE6 501 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 LAYNQ6UX15 382 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 MIB1Q86YT6 1006 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 STX19Q8N4C7 294 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 RIN2Q8WYP3 895 aaPredicted RBP13.76□□□□□ -0.21
SCN8A-202ENST00000355133 RPRD1AQ96P16 312 aaPredicted RBP13.76□□□□□ -0.21
SCN8A-202ENST00000355133 SPATA16Q9BXB7 569 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 PSD3Q9NYI0 1048 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 POLLQ9UGP5 575 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.76□□□□□ -0.21
SCN8A-202ENST00000355133 MED24O75448 989 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 PTPN7P35236 360 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 UBE3AQ05086 875 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 GRB10Q13322 594 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 ZNF177Q13360 481 aaPredicted RBP13.76□□□□□ -0.21
SCN8A-202ENST00000355133 DENND5BQ6ZUT9 1274 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 PPIL6Q8IXY8 311 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 BLOC1S5Q8TDH9 187 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 ERCC6L2Q5T890 1561 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 DDHD2O94830 711 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 HSPA1AP0DMV8 641 aaKnown RBP13.76□□□□□ -0.21
SCN8A-202ENST00000355133 HSPA1BP0DMV9 641 aaKnown RBP13.76□□□□□ -0.21
SCN8A-202ENST00000355133 ARP10275 920 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 VCAM1P19320 739 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 COILP38432 576 aaPredicted RBP13.76□□□□□ -0.21
SCN8A-202ENST00000355133 USP38Q8NB14 1042 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 CYFIP2Q96F07 1278 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 CAPN10Q9HC96 672 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 V9GYQ6 96 aa13.76□□□□□ -0.21
SCN8A-202ENST00000355133 MAN1A2O60476 641 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 CLASP2O75122 1294 aaKnown RBP13.75□□□□□ -0.21
SCN8A-202ENST00000355133 MED21Q13503 144 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 MTFR1Q15390 333 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 CLEC17AQ6ZS10 378 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 BTN2A2Q8WVV5 523 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 CYGBQ8WWM9 190 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 TMEM169Q96HH4 297 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 USP15Q9Y4E8 981 aaPredicted RBP13.75□□□□□ -0.21
SCN8A-202ENST00000355133 TMEM120BA0PK00 339 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 RAP1GAPP47736 663 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 MAP3K10Q02779 954 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 BTKQ06187 659 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 PLEKHH3Q7Z736 793 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 CBWD2Q8IUF1 395 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 IL25Q9H293 177 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 STX7O15400 261 aaKnown RBP13.75□□□□□ -0.21
SCN8A-202ENST00000355133 NFIAQ12857 509 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 CHI3L2Q15782 390 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 C11orf74Q86VG3 221 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 THTPAQ9BU02 230 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 SHCBP1LQ9BZQ2 653 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 ZNF556Q9HAH1 456 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 PKD2L2Q9NZM6 624 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 GPR182O15218 404 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 PLEKP08567 350 aaPredicted RBP13.75□□□□□ -0.21
SCN8A-202ENST00000355133 SLC11A2P49281 568 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 POU4F1Q01851 419 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 PDIA6Q15084 440 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 C16orf89Q6UX73 402 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 HASPINQ8TF76 798 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 WNK4Q96J92 1243 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 XPO6Q96QU8 1125 aaKnown RBP13.75□□□□□ -0.21
SCN8A-202ENST00000355133 CCT8L2Q96SF2 557 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 KLC4Q9NSK0 619 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 SPAG6O75602 509 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 CATSPER1Q8NEC5 780 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 ANKS1AQ92625 1134 aa13.75□□□□□ -0.21
SCN8A-202ENST00000355133 STAMBPL1Q96FJ0 436 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms