RNA–Protein interactions for RNA: ENST00000354880.9

CTSA-202, Transcript of cathepsin A, humanhuman

TSL 2 BASIC

Gene CTSA, Length 1,820 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-202ENST00000354880 ATMINO43313 823 aaPredicted RBP16.54■□□□□ 0.24
CTSA-202ENST00000354880 CYP11A1P05108 521 aa16.54■□□□□ 0.24
CTSA-202ENST00000354880 CYP1A2P05177 515 aa16.54■□□□□ 0.24
CTSA-202ENST00000354880 C1QBPQ07021 282 aaKnown RBP16.54■□□□□ 0.24
CTSA-202ENST00000354880 TOP1MTQ969P6 601 aa16.54■□□□□ 0.24
CTSA-202ENST00000354880 NAPGQ99747 312 aaPredicted RBP16.54■□□□□ 0.24
CTSA-202ENST00000354880 C11orf70Q9BRQ4 267 aa16.54■□□□□ 0.24
CTSA-202ENST00000354880 FAM49BQ9NUQ9 324 aa16.54■□□□□ 0.24
CTSA-202ENST00000354880 CTTNBP2NLQ9P2B4 639 aa16.54■□□□□ 0.24
CTSA-202ENST00000354880 CNOT8Q9UFF9 292 aaKnown RBP16.54■□□□□ 0.24
CTSA-202ENST00000354880 PRG3Q9Y2Y8 225 aaPredicted RBP16.54■□□□□ 0.24
CTSA-202ENST00000354880 NRP1O14786 923 aa16.54■□□□□ 0.24
CTSA-202ENST00000354880 AMHP03971 560 aa16.54■□□□□ 0.24
CTSA-202ENST00000354880 ACRP10323 421 aa16.54■□□□□ 0.24
CTSA-202ENST00000354880 MMP8P22894 467 aa16.54■□□□□ 0.24
CTSA-202ENST00000354880 TCEAL1Q15170 157 aa16.54■□□□□ 0.24
CTSA-202ENST00000354880 C2CD6Q53TS8 623 aa16.54■□□□□ 0.24
CTSA-202ENST00000354880 ARHGAP17Q68EM7 881 aa16.54■□□□□ 0.24
CTSA-202ENST00000354880 MMS22LQ6ZRQ5 1243 aa16.54■□□□□ 0.24
CTSA-202ENST00000354880 METTL23Q86XA0 190 aa16.54■□□□□ 0.24
CTSA-202ENST00000354880 LRRC43Q8N309 656 aa16.54■□□□□ 0.24
CTSA-202ENST00000354880 B3GALNT2Q8NCR0 500 aa16.54■□□□□ 0.24
CTSA-202ENST00000354880 TPCN2Q8NHX9 752 aa16.54■□□□□ 0.24
CTSA-202ENST00000354880 IL23AQ9NPF7 189 aa16.54■□□□□ 0.24
CTSA-202ENST00000354880 AVENQ9NQS1 362 aaPredicted RBP16.54■□□□□ 0.24
CTSA-202ENST00000354880 PALMO75781 387 aa16.53■□□□□ 0.24
CTSA-202ENST00000354880 DGKIO75912 1065 aa16.53■□□□□ 0.24
CTSA-202ENST00000354880 ALDH2P05091 517 aa16.53■□□□□ 0.24
CTSA-202ENST00000354880 CALB1P05937 261 aa16.53■□□□□ 0.24
CTSA-202ENST00000354880 ACAT1P24752 427 aaKnown RBP16.53■□□□□ 0.24
CTSA-202ENST00000354880 GPD2P43304 727 aa16.53■□□□□ 0.24
CTSA-202ENST00000354880 HADHBP55084 474 aaKnown RBP16.53■□□□□ 0.24
CTSA-202ENST00000354880 PTP4A2Q12974 167 aa16.53■□□□□ 0.24
CTSA-202ENST00000354880 GOLGA7BQ2TAP0 167 aa16.53■□□□□ 0.24
CTSA-202ENST00000354880 LIN9Q5TKA1 542 aa16.53■□□□□ 0.24
CTSA-202ENST00000354880 ERICH1Q86X53 443 aa16.53■□□□□ 0.24
CTSA-202ENST00000354880 CALR3Q96L12 384 aaKnown RBP16.53■□□□□ 0.24
CTSA-202ENST00000354880 LPIN3Q9BQK8 851 aa16.53■□□□□ 0.24
CTSA-202ENST00000354880 PCDH10Q9P2E7 1040 aa16.53■□□□□ 0.24
CTSA-202ENST00000354880 UVRAGQ9P2Y5 699 aa16.53■□□□□ 0.24
CTSA-202ENST00000354880 HESX1Q9UBX0 185 aa16.53■□□□□ 0.24
CTSA-202ENST00000354880 CHORDC1Q9UHD1 332 aaPredicted RBP16.53■□□□□ 0.24
CTSA-202ENST00000354880 COG5Q9UP83 839 aa16.53■□□□□ 0.24
CTSA-202ENST00000354880 JRKLQ9Y4A0 524 aa16.53■□□□□ 0.24
CTSA-202ENST00000354880 TSC2P49815 1807 aa16.53■□□□□ 0.24
CTSA-202ENST00000354880 GRID2IPA4D2P6 1211 aa16.52■□□□□ 0.24
CTSA-202ENST00000354880 TRAPPC3O43617 180 aa16.52■□□□□ 0.24
CTSA-202ENST00000354880 TADA2AO75478 443 aa16.52■□□□□ 0.24
CTSA-202ENST00000354880 BAIAP3O94812 1187 aa16.52■□□□□ 0.24
CTSA-202ENST00000354880 PTPN1P18031 435 aaKnown RBP16.52■□□□□ 0.24
CTSA-202ENST00000354880 TYMPP19971 482 aa16.52■□□□□ 0.24
CTSA-202ENST00000354880 RRM1P23921 792 aa16.52■□□□□ 0.24
CTSA-202ENST00000354880 PCSK1P29120 753 aa16.52■□□□□ 0.24
CTSA-202ENST00000354880 WDR5P61964 334 aaKnown RBP16.52■□□□□ 0.24
CTSA-202ENST00000354880 PSMC1P62191 440 aaKnown RBP16.52■□□□□ 0.24
CTSA-202ENST00000354880 UBA3Q8TBC4 463 aa16.52■□□□□ 0.24
CTSA-202ENST00000354880 TMEM175Q9BSA9 504 aa16.52■□□□□ 0.24
CTSA-202ENST00000354880 NUP85Q9BW27 656 aa16.52■□□□□ 0.24
CTSA-202ENST00000354880 HCSTQ9UBK5 93 aa16.52■□□□□ 0.24
CTSA-202ENST00000354880 CYTH4Q9UIA0 394 aa16.52■□□□□ 0.24
CTSA-202ENST00000354880 PCDHB8Q9UN66 801 aa16.52■□□□□ 0.24
CTSA-202ENST00000354880 FAN1Q9Y2M0 1017 aa16.52■□□□□ 0.24
CTSA-202ENST00000354880 ENC1O14682 589 aa16.52■□□□□ 0.23
CTSA-202ENST00000354880 MTA2O94776 668 aa16.52■□□□□ 0.23
CTSA-202ENST00000354880 CCDC130P13994 396 aa16.52■□□□□ 0.23
CTSA-202ENST00000354880 SLC11A1P49279 550 aa16.52■□□□□ 0.23
CTSA-202ENST00000354880 DEFB103AP81534 67 aa16.52■□□□□ 0.23
CTSA-202ENST00000354880 PPIGQ13427 754 aaKnown RBP eCLIP16.52■□□□□ 0.231e-6■■■□□ 14.9
CTSA-202ENST00000354880 PKDCCQ504Y2 493 aa16.52■□□□□ 0.23
CTSA-202ENST00000354880 OVOS1Q6IE37 1185 aa16.52■□□□□ 0.23
CTSA-202ENST00000354880 TTC30AQ86WT1 665 aa16.52■□□□□ 0.23
CTSA-202ENST00000354880 LRRC57Q8N9N7 239 aa16.52■□□□□ 0.23
CTSA-202ENST00000354880 MSANTD4Q8NCY6 345 aa16.52■□□□□ 0.23
CTSA-202ENST00000354880 ZNF564Q8TBZ8 553 aaPredicted RBP16.52■□□□□ 0.23
CTSA-202ENST00000354880 SYT15Q9BQS2 421 aa16.52■□□□□ 0.23
CTSA-202ENST00000354880 COLEC11Q9BWP8 271 aa16.52■□□□□ 0.23
CTSA-202ENST00000354880 ADAM28Q9UKQ2 775 aa16.52■□□□□ 0.23
CTSA-202ENST00000354880 CDH9Q9ULB4 789 aa16.52■□□□□ 0.23
CTSA-202ENST00000354880 ATP2C2O75185 946 aa16.51■□□□□ 0.23
CTSA-202ENST00000354880 URI1O94763 535 aaPredicted RBP16.51■□□□□ 0.23
CTSA-202ENST00000354880 GALTP07902 379 aa16.51■□□□□ 0.23
CTSA-202ENST00000354880 PDCLQ13371 301 aa16.51■□□□□ 0.23
CTSA-202ENST00000354880 PTPN20Q4JDL3 420 aa16.51■□□□□ 0.23
CTSA-202ENST00000354880 KIAA0319Q5VV43 1072 aa16.51■□□□□ 0.23
CTSA-202ENST00000354880 OTOP2Q7RTS6 562 aa16.51■□□□□ 0.23
CTSA-202ENST00000354880 C7orf61Q8IZ16 206 aa16.51■□□□□ 0.23
CTSA-202ENST00000354880 SYCE1Q8N0S2 351 aa16.51■□□□□ 0.23
CTSA-202ENST00000354880 ANKRD52Q8NB46 1076 aa16.51■□□□□ 0.23
CTSA-202ENST00000354880 SLC2A14Q8TDB8 520 aa16.51■□□□□ 0.23
CTSA-202ENST00000354880 BADQ92934 168 aa16.51■□□□□ 0.23
CTSA-202ENST00000354880 CPXM1Q96SM3 734 aa16.51■□□□□ 0.23
CTSA-202ENST00000354880 ACBD6Q9BR61 282 aa16.51■□□□□ 0.23
CTSA-202ENST00000354880 STRIP2Q9ULQ0 834 aa16.51■□□□□ 0.23
CTSA-202ENST00000354880 BUB1BO60566 1050 aaPredicted RBP16.5■□□□□ 0.23
CTSA-202ENST00000354880 ATP1A1P05023 1023 aaKnown RBP16.5■□□□□ 0.23
CTSA-202ENST00000354880 ADORA2BP29275 332 aa16.5■□□□□ 0.23
CTSA-202ENST00000354880 YWHAHQ04917 246 aaPredicted RBP16.5■□□□□ 0.23
CTSA-202ENST00000354880 PLEKHA7Q6IQ23 1121 aa16.5■□□□□ 0.23
CTSA-202ENST00000354880 LLGL2Q6P1M3 1020 aa16.5■□□□□ 0.23
CTSA-202ENST00000354880 PHLDB2Q86SQ0 1253 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms